CuGenDBv2

Gene ID	CsGy4G007040
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	gamma aminobutyrate transaminase 1, mitochondrial-like
Genome location	Gy14Chr4:5131005..5131421
RNA-Seq Expression	CsGy4G007040
Synteny	CsGy4G007040
Gene Ontology terms	GO:0009102 - biotin biosynthetic process (biological process) GO:0009448 - gamma-aminobutyric acid metabolic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003867 - 4-aminobutyrate transaminase activity (molecular function) GO:0004015 - adenosylmethionine-8-amino-7-oxononanoate transaminase activity (molecular function) GO:0004141 - dethiobiotin synthase activity (molecular function) GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domains	IPR015422 - Pyridoxal phosphate-dependent transferase, small domain IPR015424 - Pyridoxal phosphate-dependent transferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0044992.1 gamma aminobutyrate transaminase 3 [Cucumis melo var. makuwa]

1.17e-20

86.79

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVGK FGAECR+NGLI RTGGDTITLSPSF ISPQEVDGL SKY KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

KAG6577090.1 Gamma aminobutyrate transaminase 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.44e-16

75.47

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG YF AECRKNGLI+R GGDTIT++P F+ISPQEVD L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

KGN53492.1 hypothetical protein Csa_015333 [Cucumis sativus]

2.15e-63

100

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Query:  MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV
        MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV
Subjt:  MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV

TYK16479.1 gamma aminobutyrate transaminase 3 [Cucumis melo var. makuwa]

6.76e-21

86.79

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVGK FGAECR+NGLI RTGGDTITLSPSF ISPQEVDGL SKY KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

XP_022931321.1 gamma aminobutyrate transaminase 1, mitochondrial-like [Cucurbita moschata]

2.48e-16

75.47

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG YF AECRKNGLI+R GGDTIT++P F+ISPQEVD L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYR6 Uncharacterized protein

1.04e-63

100

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Query:  MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV
        MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV
Subjt:  MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV

A0A5A7TNQ3 Gamma aminobutyrate transaminase 3

5.66e-21

86.79

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVGK FGAECR+NGLI RTGGDTITLSPSF ISPQEVDGL SKY KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

A0A5D3D1Y0 Gamma aminobutyrate transaminase 3

3.28e-21

86.79

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVGK FGAECR+NGLI RTGGDTITLSPSF ISPQEVDGL SKY KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

A0A6J1ETB2 gamma aminobutyrate transaminase 1, mitochondrial-like

7.60e-16

71.7

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG YFGAECRKNGLI+R G +TIT++P F+ISPQEVD ++S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

A0A6J1ETC9 gamma aminobutyrate transaminase 1, mitochondrial-like

1.20e-16

75.47

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG YF AECRKNGLI+R GGDTIT++P F+ISPQEVD L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

SwissProt top hits

e value

%identity

Alignment

B8BBZ7 Probable gamma-aminobutyrate transaminase 3, mitochondrial

2.3e-10

56.6

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG  FGAEC K G++IR  GD I LSP  +++P EV+ ++SKY  ALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Q01K12 Probable gamma-aminobutyrate transaminase 2, mitochondrial

2.0e-09

52.83

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GV + FGAEC+K G++++  GD I +SP  ++S +EVDGL+S Y +ALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Q6ZCF0 Probable gamma-aminobutyrate transaminase 3, mitochondrial

8.8e-10

54.72

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG  FGAEC K G++IR  GD I LSP  +++P EV+ ++ KY  ALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Q84P54 Gamma aminobutyrate transaminase 1, mitochondrial

3.6e-11

52.83

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG YFGA+C+KNG+++R  GDTI +SP F+++P+E+D L+  Y KAL+  E+
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Q94CE5 Gamma-aminobutyrate transaminase POP2, mitochondrial

1.2e-11

58.49

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG +FGAEC+K+G+++R  GD I +SP  +ISP+E+D L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Arabidopsis top hits

e value

%identity

Alignment

AT3G22200.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

8.7e-13

58.49

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG +FGAEC+K+G+++R  GD I +SP  +ISP+E+D L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

AT3G22200.2 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

8.7e-13

58.49

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Query:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE
        GVG +FGAEC+K+G+++R  GD I +SP  +ISP+E+D L+S Y KALKA EE
Subjt:  GVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEE

Sequences

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CDS sequence

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ATGCGGTGGATCTTGATTTACCAGGTCATACTTATGCTTATAGGAGTTGGTAAATATTTTGGAGCTGAATGTCGAAAAAATGGTTTGATAATAAGAACTGGAGGGGATAC
TATAACGCTGTCTCCATCATTTATGATCTCTCCTCAAGAAGTTGATGGGTTAATGAGCAAATACGAAAAAGCACTGAAAGCCATTGAAGAGAGTGAAGGAATTGAAGGCT
CAGAAAAAGAAGCGGCAAATAGTTACAATGAATGGCTTGAAGGAACAGAATCATGTCTACACTCAAGGAACGTATAA

mRNA sequence

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Protein sequence

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MRWILIYQVILMLIGVGKYFGAECRKNGLIIRTGGDTITLSPSFMISPQEVDGLMSKYEKALKAIEESEGIEGSEKEAANSYNEWLEGTESCLHSRNV

CsGy4G007040 (gene) of Cucumber (Gy14) v2.1 genome