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CsGy4G007600 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G007600
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionglycine-rich RNA-binding protein GRP2A-like
Genome locationGy14Chr4:5688178..5688822
RNA-Seq ExpressionCsGy4G007600
SyntenyCsGy4G007600
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063029.1 hypothetical protein E6C27_scaffold468G001370 [Cucumis melo var. makuwa]5.14e-10088.71Show/hide
Query:  IGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTDARGFQTSEQSIFPDTRSSRRNER-SILPDT
        IG GY+KKDA+ LPTPSVSIGRSRPLQTYRD+EFGQGIRTYRQDSTPRSE+SI  DTRGSQR EQSIF DARGFQTSEQSIFPDTRSSRRNE   ILPDT
Subjt:  IGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTDARGFQTSEQSIFPDTRSSRRNER-SILPDT

Query:  QSSRRSEQIDRQD-TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYGGGVGSNSYGNGSQL
        Q SRRSE+IDRQD TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDG YVDNC DGTDG GVYGGG GSNS GNGSQL
Subjt:  QSSRRSEQIDRQD-TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYGGGVGSNSYGNGSQL

KAE8649249.1 hypothetical protein Csa_015081, partial [Cucumis sativus]1.04e-138100Show/hide
Query:  MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD
        MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD
Subjt:  MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD

Query:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG
        ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG
Subjt:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG

Query:  GGVGSNSYGNGSQL
        GGVGSNSYGNGSQL
Subjt:  GGVGSNSYGNGSQL

KAG6600486.1 hypothetical protein SDJN03_05719, partial [Cucurbita argyrosperma subsp. sororia]2.05e-2944.05Show/hide
Query:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSI
        D+KPSI+I+IIC SL+    ILCC CII  G ++KD+ + PTPS SI   RP       Q+Y D+E GQGIR +RQD T RSE+S+ SD  G+QR EQ  
Subjt:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSI

Query:  F-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDG
        F TD +R  Q+SE S+  D RS                               KDGGMAI AGAGAA+A AA  LGLSS            Y G   +  
Subjt:  F-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSS------------YQGGEDIDG

Query:  DYVDNC-----DDGTDGGGVYGGGVGS
         Y D+C     D G+ GGGV G G GS
Subjt:  DYVDNC-----DDGTDGGGVYGGGVGS

XP_022942031.1 glycine-rich RNA-binding protein GRP2A-like [Cucurbita moschata]4.18e-2944.54Show/hide
Query:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP-------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQS
        D+KPSI+I+IIC SL+    ILCC CII  G ++KD+ + PTPS SI   RP        Q+Y D+E GQGIR YRQD T RSE+S+ SD  G+QR EQ 
Subjt:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP-------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQS

Query:  IF-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGD----------
         F TD +R  Q+SE S+  D RS                               KDGGMAI AGAGAA+A AA  LGLSS  GG++  G+          
Subjt:  IF-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGD----------

Query:  ---YVDNC-----DDGTDGGGVYGGGVGS
           Y D+C     D G+ GGGV G G GS
Subjt:  ---YVDNC-----DDGTDGGGVYGGGVGS

XP_023543717.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]8.09e-2944.93Show/hide
Query:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSI
        D+KPSI+I+IIC SL+    ILCC CII  G R+KD+ + PTPS SI   RP       Q+Y D+E GQGIR YRQD T RSE+S+ SD  G+QR E+  
Subjt:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSI

Query:  F-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSS-----YQGGEDI---DGDYVD
        F TD +R  Q+SE S+  D                             ++S  KDGGMAILAGAGAA+A AA  +GLSS     Y G  D    DG   D
Subjt:  F-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSS-----YQGGEDI---DGDYVD

Query:  ---------NCDDGTDGGGVYGGGVGS
                 N D G+ GGGV G G GS
Subjt:  ---------NCDDGTDGGGVYGGGVGS

TrEMBL top hitse value%identityAlignment
A0A0A0L0B2 Uncharacterized protein3.15e-139100Show/hide
Query:  MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD
        MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD
Subjt:  MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD

Query:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG
        ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG
Subjt:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYG

Query:  GGVGSNSYGNGSQL
        GGVGSNSYGNGSQL
Subjt:  GGVGSNSYGNGSQL

A0A5A7VBP6 Uncharacterized protein2.49e-10088.71Show/hide
Query:  IGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTDARGFQTSEQSIFPDTRSSRRNER-SILPDT
        IG GY+KKDA+ LPTPSVSIGRSRPLQTYRD+EFGQGIRTYRQDSTPRSE+SI  DTRGSQR EQSIF DARGFQTSEQSIFPDTRSSRRNE   ILPDT
Subjt:  IGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTDARGFQTSEQSIFPDTRSSRRNER-SILPDT

Query:  QSSRRSEQIDRQD-TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYGGGVGSNSYGNGSQL
        Q SRRSE+IDRQD TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDG YVDNC DGTDG GVYGGG GSNS GNGSQL
Subjt:  QSSRRSEQIDRQD-TRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYGGGVGSNSYGNGSQL

A0A6J1CLX2 ctenidin-3-like7.03e-1035.42Show/hide
Query:  KPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSR---PLQTYR--DIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD
        KP   I+IIC+S++    ILCC CII  G +KK+  +L   S S   SR   P QTY   DIE GQG RT                              
Subjt:  KPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSR---PLQTYR--DIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTD

Query:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDG
                                              +RQ  R S IKDGGMAILAGAG AIATAA + GLSS    E  +G Y D+C DG
Subjt:  ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDG

A0A6J1FMR9 glycine-rich RNA-binding protein GRP2A-like2.02e-2944.54Show/hide
Query:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP-------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQS
        D+KPSI+I+IIC SL+    ILCC CII  G ++KD+ + PTPS SI   RP        Q+Y D+E GQGIR YRQD T RSE+S+ SD  G+QR EQ 
Subjt:  DLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRP-------LQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQS

Query:  IF-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGD----------
         F TD +R  Q+SE S+  D RS                               KDGGMAI AGAGAA+A AA  LGLSS  GG++  G+          
Subjt:  IF-TD-ARGFQTSEQSIFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGD----------

Query:  ---YVDNC-----DDGTDGGGVYGGGVGS
           Y D+C     D G+ GGGV G G GS
Subjt:  ---YVDNC-----DDGTDGGGVYGGGVGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTGGATTTGAAACCTTCCATCCTCATTGTCATAATTTGCACTTCTTTAGTAGTTGTTGCTGCGATTTTATGTTGCTTTTGTATAATTGGATGTGGTTATAGAAA
GAAAGATGCAAATCAATTGCCTACTCCAAGTGTAAGTATTGGACGTTCAAGGCCATTGCAAACGTACCGGGATATTGAATTTGGACAAGGTATTCGAACTTATAGACAAG
ACTCGACTCCAAGAAGCGAACGAAGCATTTCTTCGGACACACGAGGTTCTCAAAGAGGTGAACAAAGCATTTTTACTGACGCACGAGGTTTTCAAACAAGTGAACAAAGC
ATTTTCCCTGACACACGAAGTTCTCGAAGAAATGAACGTAGTATTCTACCGGACACACAAAGTTCTCGAAGAAGTGAACAAATCGACCGACAAGATACTCGAGAAAGCAG
AATCAAGGACGGTGGGATGGCCATCTTAGCTGGAGCAGGCGCTGCTATAGCTACTGCAGCTACTGTTCTTGGTTTAAGTAGTTATCAAGGGGGAGAAGATATCGATGGTG
ATTATGTCGATAACTGTGATGATGGTACTGATGGCGGTGGCGTCTATGGTGGTGGTGTTGGCAGCAACAGCTATGGCAATGGCTCTCAACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTGGATTTGAAACCTTCCATCCTCATTGTCATAATTTGCACTTCTTTAGTAGTTGTTGCTGCGATTTTATGTTGCTTTTGTATAATTGGATGTGGTTATAGAAA
GAAAGATGCAAATCAATTGCCTACTCCAAGTGTAAGTATTGGACGTTCAAGGCCATTGCAAACGTACCGGGATATTGAATTTGGACAAGGTATTCGAACTTATAGACAAG
ACTCGACTCCAAGAAGCGAACGAAGCATTTCTTCGGACACACGAGGTTCTCAAAGAGGTGAACAAAGCATTTTTACTGACGCACGAGGTTTTCAAACAAGTGAACAAAGC
ATTTTCCCTGACACACGAAGTTCTCGAAGAAATGAACGTAGTATTCTACCGGACACACAAAGTTCTCGAAGAAGTGAACAAATCGACCGACAAGATACTCGAGAAAGCAG
AATCAAGGACGGTGGGATGGCCATCTTAGCTGGAGCAGGCGCTGCTATAGCTACTGCAGCTACTGTTCTTGGTTTAAGTAGTTATCAAGGGGGAGAAGATATCGATGGTG
ATTATGTCGATAACTGTGATGATGGTACTGATGGCGGTGGCGTCTATGGTGGTGGTGTTGGCAGCAACAGCTATGGCAATGGCTCTCAACTTTGA
Protein sequenceShow/hide protein sequence
MLLDLKPSILIVIICTSLVVVAAILCCFCIIGCGYRKKDANQLPTPSVSIGRSRPLQTYRDIEFGQGIRTYRQDSTPRSERSISSDTRGSQRGEQSIFTDARGFQTSEQS
IFPDTRSSRRNERSILPDTQSSRRSEQIDRQDTRESRIKDGGMAILAGAGAAIATAATVLGLSSYQGGEDIDGDYVDNCDDGTDGGGVYGGGVGSNSYGNGSQL