; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G008600 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G008600
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrotransposable element Tf2
Genome locationGy14Chr4:6616827..6617255
RNA-Seq ExpressionCsGy4G008600
SyntenyCsGy4G008600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026133.1 hypothetical protein E6C27_scaffold19G00840 [Cucumis melo var. makuwa]8.93e-4865.89Show/hide
Query:  SHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISS
        SHQLS+RAKFKIL KIL V+WWD      +NEE+IAKWFK N HLS+EEEDQFLL KNS+MT I GAKSEADLQ VM+TV++   DD K++  ED    S
Subjt:  SHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISS

Query:  NSFANDIDFDNDPYYNFDISDPYFDSLLE
        NS  NDIDF+N+PYYNFDI DPY +S  E
Subjt:  NSFANDIDFDNDPYYNFDISDPYFDSLLE

KAA0050626.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]5.81e-6073.05Show/hide
Query:  YRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIY
        YRFSLYFQV WIF W HQLS+RAKFKIL KILRVKWWD      +NEE+IAKWFKTN  LS+EEEDQFLL KNSIMT IAGAKSEADLQ VMETV++   
Subjt:  YRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIY

Query:  DDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS
        DD+K++D ED    S+S  NDIDF NDPYYNFDISD Y DS
Subjt:  DDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS

KAA0051819.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]3.54e-6171.13Show/hide
Query:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTI
        MYRFSLYFQV WIF W HQLS+RAKFKI  KIL VKWWD      ++E++I KWFKTN  L +EEEDQFLL KNSIMT IAGAKSEADLQ +M+TV+H I
Subjt:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTI

Query:  YDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS
        +DD+KE+D EDTRISS+S  N+ID DND YYNFDI DPY DS
Subjt:  YDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS

KGN53659.1 hypothetical protein Csa_014527 [Cucumis sativus]1.13e-97100Show/hide
Query:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD
        MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD
Subjt:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD

Query:  DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE
        DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE
Subjt:  DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE

TYK04653.1 cysteine-rich RLK RECEPTOR-like protein kinase [Cucumis melo var. makuwa]7.29e-3467.65Show/hide
Query:  WDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYF
        +D   +NEE+IAKWFKTN HLS+EE DQFLL KNSIMT IA AKSEADLQ VMETV++   DD+K++  ED    S+S  NDIDF NDPYYNFDI DPY 
Subjt:  WDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYF

Query:  DS
        DS
Subjt:  DS

TrEMBL top hitse value%identityAlignment
A0A0A0KXT5 Uncharacterized protein5.47e-98100Show/hide
Query:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD
        MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD
Subjt:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDD

Query:  DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE
        DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE
Subjt:  DKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDSLLE

A0A5A7U8X4 Retrotransposable element Tf22.81e-6073.05Show/hide
Query:  YRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIY
        YRFSLYFQV WIF W HQLS+RAKFKIL KILRVKWWD      +NEE+IAKWFKTN  LS+EEEDQFLL KNSIMT IAGAKSEADLQ VMETV++   
Subjt:  YRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIY

Query:  DDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS
        DD+K++D ED    S+S  NDIDF NDPYYNFDISD Y DS
Subjt:  DDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS

A0A5A7UEA0 Retrotransposable element Tf21.71e-6171.13Show/hide
Query:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTI
        MYRFSLYFQV WIF W HQLS+RAKFKI  KIL VKWWD      ++E++I KWFKTN  L +EEEDQFLL KNSIMT IAGAKSEADLQ +M+TV+H I
Subjt:  MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTI

Query:  YDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS
        +DD+KE+D EDTRISS+S  N+ID DND YYNFDI DPY DS
Subjt:  YDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYFDS

A0A5D3BY11 Cysteine-rich RLK RECEPTOR-like protein kinase3.53e-3467.65Show/hide
Query:  WDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYF
        +D   +NEE+IAKWFKTN HLS+EE DQFLL KNSIMT IA AKSEADLQ VMETV++   DD+K++  ED    S+S  NDIDF NDPYYNFDI DPY 
Subjt:  WDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISSNSFANDIDFDNDPYYNFDISDPYF

Query:  DS
        DS
Subjt:  DS

A0A5D3CI63 Uncharacterized protein4.32e-4865.89Show/hide
Query:  SHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISS
        SHQLS+RAKFKIL KIL V+WWD      +NEE+IAKWFK N HLS+EEEDQFLL KNS+MT I GAKSEADLQ VM+TV++   DD K++  ED    S
Subjt:  SHQLSTRAKFKILRKILRVKWWDN---DLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTRISS

Query:  NSFANDIDFDNDPYYNFDISDPYFDSLLE
        NS  NDIDF+N+PYYNFDI DPY +S  E
Subjt:  NSFANDIDFDNDPYYNFDISDPYFDSLLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAGATTCTCTCTCTACTTCCAAGTGCTCTGGATTTTCTACTGGAGCCACCAACTATCAACCAGAGCAAAGTTCAAGATCTTAAGAAAGATCTTGCGTGTCAAGTG
GTGGGATAACGACTTAGTGAATGAAGAGAAAATAGCAAAGTGGTTCAAGACAAACACTCATCTTTCTCAAGAAGAAGAAGATCAATTCCTTCTTAGGAAAAATTCAATCA
TGACCTTCATCGCTGGAGCAAAATCTGAAGCAGATCTTCAAACGGTCATGGAAACAGTCATCCACACCATTTATGATGACGACAAAGAAAATGATGTTGAAGATACCAGA
ATTTCTTCAAACTCATTTGCTAATGATATTGATTTTGATAATGATCCGTATTACAATTTCGATATTAGCGATCCCTATTTCGATTCCCTGTTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAGATTCTCTCTCTACTTCCAAGTGCTCTGGATTTTCTACTGGAGCCACCAACTATCAACCAGAGCAAAGTTCAAGATCTTAAGAAAGATCTTGCGTGTCAAGTG
GTGGGATAACGACTTAGTGAATGAAGAGAAAATAGCAAAGTGGTTCAAGACAAACACTCATCTTTCTCAAGAAGAAGAAGATCAATTCCTTCTTAGGAAAAATTCAATCA
TGACCTTCATCGCTGGAGCAAAATCTGAAGCAGATCTTCAAACGGTCATGGAAACAGTCATCCACACCATTTATGATGACGACAAAGAAAATGATGTTGAAGATACCAGA
ATTTCTTCAAACTCATTTGCTAATGATATTGATTTTGATAATGATCCGTATTACAATTTCGATATTAGCGATCCCTATTTCGATTCCCTGTTAGAATGA
Protein sequenceShow/hide protein sequence
MYRFSLYFQVLWIFYWSHQLSTRAKFKILRKILRVKWWDNDLVNEEKIAKWFKTNTHLSQEEEDQFLLRKNSIMTFIAGAKSEADLQTVMETVIHTIYDDDKENDVEDTR
ISSNSFANDIDFDNDPYYNFDISDPYFDSLLE