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CsGy4G009025 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G009025
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationGy14Chr4:7233514..7233834
RNA-Seq ExpressionCsGy4G009025
SyntenyCsGy4G009025
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.65e-2669.41Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVFFYLLNECNLIIK
        MS HQLLT MDTDV M NI NIC +KHLQMYQIDKST KNQRTKR++NN+ELR+D +NQLEIDD+RVV  + F  LL++  L IK
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVFFYLLNECNLIIK

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.14e-1366.07Show/hide
Query:  NIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVF
        NI NIC +KHLQMYQIDKST KNQRTKR++NN+E R++ DNQL+ID+++VV  + F
Subjt:  NIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVF

KAA0065673.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]5.77e-1576Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM
        MS HQLLT MD DVTM NI NIC +KHLQMYQIDKST KNQRTKR++N++
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.98e-2272.31Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDL
        MS H +LT MD DV M NI NIC +KHLQMYQIDKST KNQRTKR++NN+E R+D DNQLEIDD+
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDL

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]6.34e-1576Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM
        MS HQLLT MD DVTM NI NIC +KHLQMYQIDKST KNQRTKR++N++
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein5.50e-1466.07Show/hide
Query:  NIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVF
        NI NIC +KHLQMYQIDKST KNQRTKR++NN+E R++ DNQL+ID+++VV  + F
Subjt:  NIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVF

A0A5A7VBU8 GATA zinc finger domain-containing protein 10-like isoform X22.79e-1576Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM
        MS HQLLT MD DVTM NI NIC +KHLQMYQIDKST KNQRTKR++N++
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.86e-2272.31Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDL
        MS H +LT MD DV M NI NIC +KHLQMYQIDKST KNQRTKR++NN+E R+D DNQLEIDD+
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDL

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.22e-2669.41Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVFFYLLNECNLIIK
        MS HQLLT MDTDV M NI NIC +KHLQMYQIDKST KNQRTKR++NN+ELR+D +NQLEIDD+RVV  + F  LL++  L IK
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVFFYLLNECNLIIK

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X23.07e-1576Show/hide
Query:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM
        MS HQLLT MD DVTM NI NIC +KHLQMYQIDKST KNQRTKR++N++
Subjt:  MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCCCATCAACTTCTTACATACATGGACACGGACGTGACCATGGAGAACATAAAGAATATATGTACTATAAAACATCTGCAAATGTATCAGATTGACAAGAGTAC
AACTAAGAACCAGAGAACCAAAAGGAGCCAGAACAATATGGAGCTCAGAATTGACAAAGACAATCAGCTAGAAATCGATGACCTCCGGGTTGTGAACACATTGGTTTTCT
TTTATCTTTTAAATGAATGTAATTTGATTATTAAAAAATATTTTACCTTACAATTAATTTTTTTTAACTATGAGTCATTATTAACAAAAATGGTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCCCATCAACTTCTTACATACATGGACACGGACGTGACCATGGAGAACATAAAGAATATATGTACTATAAAACATCTGCAAATGTATCAGATTGACAAGAGTAC
AACTAAGAACCAGAGAACCAAAAGGAGCCAGAACAATATGGAGCTCAGAATTGACAAAGACAATCAGCTAGAAATCGATGACCTCCGGGTTGTGAACACATTGGTTTTCT
TTTATCTTTTAAATGAATGTAATTTGATTATTAAAAAATATTTTACCTTACAATTAATTTTTTTTAACTATGAGTCATTATTAACAAAAATGGTTCAATAA
Protein sequenceShow/hide protein sequence
MSAHQLLTYMDTDVTMENIKNICTIKHLQMYQIDKSTTKNQRTKRSQNNMELRIDKDNQLEIDDLRVVNTLVFFYLLNECNLIIKKYFTLQLIFFNYESLLTKMVQ