CuGenDBv2

Gene ID	CsGy4G009200
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	classical arabinogalactan protein 4
Genome location	Gy14Chr4:7425939..7426511
RNA-Seq Expression	CsGy4G009200
Synteny	CsGy4G009200
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8649311.1 hypothetical protein Csa_014808 [Cucumis sativus]

5.42e-99

100

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI

KAG7014869.1 hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.14e-60

70.68

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS AANSP PSPAP+ ESP WKWTP  E PSSPP  EPP       SP++SPP    ELSPVP+S  PTSPP ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK SP PA+APKSS  PVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGGS+A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

XP_008462882.1 PREDICTED: classical arabinogalactan protein 4 [Cucumis melo]

4.42e-98

93.72

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSIA G MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

XP_011654351.1 classical arabinogalactan protein 4 [Cucumis sativus]

7.58e-108

100

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA

XP_038877309.1 vegetative cell wall protein gp1-like [Benincasa hispida]

2.38e-81

83.25

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASST+L +LT+A LLIS AANSP PSPAP  ESP WKWTPSNEPPSSPP AEPPMTT SPPSPTISPP TPPE+SP+P+SYAPT PP ANPPTLSPTA 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PP VKSPSHAPSPAKTKAPAPAPSK SP+PAKAPKSSKAP SSPPSPNG MEPP PSVAPAPSK+ NG  ANRFAIGGS+A GLMIAA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0Q7 Uncharacterized protein

3.67e-108

100

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
        PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA

A0A1S3CHW9 classical arabinogalactan protein 4

2.14e-98

93.72

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSIA G MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

A0A5A7V3Q7 Classical arabinogalactan protein 4

2.14e-98

93.72

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MASSTLLNLLTLAFLLIS AANSPAPSPAP+AESPTWKWTP+N+PPSSPPTAEPPMTTTSPPSPTISPP TPPELSPVP+SY+PTSPPMANPPTLSPTAP
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAV SPSHAPSPAKTKAPAPAPSK SPAPAKAPKSSKAPVSSPPSPNGQMEPPTPS APAPSKEGNGAGANRFAIGGSIA G MIAAFIA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

A0A6J1E3R0 extensin-like

5.19e-59

69.11

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS +ANSP PSPAP+ ESP WKWTP  + PSSPP  EPP       SP++SPP    ELSPVP+S  PTSPP ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK S  PA+APKSS APVSSPP+PNG+MEPPTPSVAP   K  NG  ANRFAIGG++A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

A0A6J1JCM0 extensin-like

6.47e-55

67.54

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Query:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP
        MAS  +LN++T A LLIS +ANSP PS AP+ ES  WKWTP  E PSSPP  EPP       SP++SPP    ELSPVP+S  PTSP  ANPPTLSP A 
Subjt:  MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAP

Query:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA
        PPAVKSP HAPSP+KTKAPAPAPSK SP PA+APKSS AP SSPP+PNG+MEPPTPSVAP   K  NG  ANRFAI  S+A GLM AA IA
Subjt:  PPAVKSPSHAPSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIA-GLMIAAFIA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44191.1 ECA1 gametogenesis related family protein

3.8e-04

36.05

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Query:  PAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSP-TISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKS----PSHAPSPAKTKA
        P+P P   +  P    +P   PPS  P+  P     SPP P   SPPP P +  P P   +P   P  +PP   P++PPP+ K     P  +PSP K   
Subjt:  PAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSP-TISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKS----PSHAPSPAKTKA

Query:  PAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKE
        P P P K+ P+P K      +P  SPP P     PP PS  P   K+
Subjt:  PAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKE

Sequences

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CDS sequence

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ATGGCTTCCTCCACCCTTCTCAATCTTCTCACCCTAGCCTTCCTGCTTATCTCCACCGCTGCCAACTCCCCGGCACCCTCTCCAGCACCCACCGCCGAATCACCAACGTG
GAAATGGACACCTTCTAACGAACCACCCTCCTCTCCACCCACTGCGGAGCCGCCAATGACGACAACGTCTCCACCTTCGCCTACAATATCTCCCCCGCCCACCCCACCGG
AGCTCAGCCCCGTTCCAACATCCTATGCACCCACTTCGCCGCCCATGGCTAACCCACCTACATTGTCGCCGACCGCTCCACCGCCGGCAGTGAAGAGTCCAAGTCATGCC
CCGTCGCCGGCGAAAACAAAAGCACCCGCTCCAGCTCCGTCGAAAACTAGTCCGGCGCCAGCAAAGGCACCGAAATCTTCTAAAGCTCCGGTGAGTAGTCCTCCGTCACC
GAATGGACAGATGGAGCCACCGACGCCATCCGTAGCTCCGGCACCGTCGAAAGAGGGTAACGGCGCCGGTGCAAACAGATTCGCCATTGGTGGGTCTATTGCAGGATTAA
TGATTGCGGCTTTTATCGCTTAA

mRNA sequence

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Protein sequence

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MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTSPPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHA
PSPAKTKAPAPAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSIAGLMIAAFIA

CsGy4G009200 (gene) of Cucumber (Gy14) v2.1 genome