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CsGy4G009205 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G009205
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionClassical arabinogalactan protein 1-like
Genome locationGy14Chr4:7441903..7442465
RNA-Seq ExpressionCsGy4G009205
SyntenyCsGy4G009205
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061155.1 classical arabinogalactan protein 1-like [Cucumis melo var. makuwa]1.16e-3878.86Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPS----PASSPASISSPPADAPAPSGNG
        MAI SLVA+I VSF IASAFAQSP  SPS    K+PS +PS+ SPKSSPA+APTPSSLKSPPSPP +SPSTSPS    PA+SP+SISSPPADAPAPSGNG
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPS----PASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASITFSV GS AVALYAVVLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
KGN53727.1 hypothetical protein Csa_015026 [Cucumis sativus]5.08e-5698.32Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNGAASI
        MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPS NSPKSSPAVAPTPSSLKSPPSPP SSPSTSPSPASSPASISSPPADAPAPSGNGAASI
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNGAASI

Query:  TFSVFGSVAVALYAVVLMI
        TFSVFGSVAVALYAVVLMI
Subjt:  TFSVFGSVAVALYAVVLMI
XP_004137273.2 60S ribosomal protein L22 [Cucumis sativus]3.56e-3997.87Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSG
        MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPS NSPKSSPAVAPTPSSLKSPPSPP SSPSTSPSPASSPASISSPPADAPAPSG
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSG
XP_022942993.1 classical arabinogalactan protein 1-like [Cucurbita moschata]6.75e-3673.17Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG
        MAI   V ++ V+  I SA AQSP+ASPSLSPTKSPSKAPS++    SPKSSPA APTP+SLKSPPSPP +SPS SPSP  SP+SISSPPADAPAPSGN 
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASI+FS+FGSVA  LYA+VLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
XP_023542663.1 classical arabinogalactan protein 1-like [Cucurbita pepo subsp. pepo]2.51e-3671.54Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG
        MAI   V ++ V+  I SA AQSP+ASPSLSPTKSPSKAPS++    SPKSSPA APTP+SL+SPPSPP +SPS SPSP+ SP+SISSPPADAPAPSGN 
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASI+ S+FGSVA  LYA+VLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
TrEMBL top hitse value%identityAlignment
A0A0A0KZB8 Uncharacterized protein2.46e-5698.32Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNGAASI
        MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPS NSPKSSPAVAPTPSSLKSPPSPP SSPSTSPSPASSPASISSPPADAPAPSGNGAASI
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNGAASI

Query:  TFSVFGSVAVALYAVVLMI
        TFSVFGSVAVALYAVVLMI
Subjt:  TFSVFGSVAVALYAVVLMI
A0A5A7V5Q9 Classical arabinogalactan protein 1-like5.63e-3978.86Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPS----PASSPASISSPPADAPAPSGNG
        MAI SLVA+I VSF IASAFAQSP  SPS    K+PS +PS+ SPKSSPA+APTPSSLKSPPSPP +SPSTSPS    PA+SP+SISSPPADAPAPSGNG
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPS----PASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASITFSV GS AVALYAVVLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
A0A6J1FW49 classical arabinogalactan protein 1-like3.27e-3673.17Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG
        MAI   V ++ V+  I SA AQSP+ASPSLSPTKSPSKAPS++    SPKSSPA APTP+SLKSPPSPP +SPS SPSP  SP+SISSPPADAPAPSGN 
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASI+FS+FGSVA  LYA+VLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
A0A6J1J6X2 classical arabinogalactan protein 1-like1.11e-3273.17Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAP----SLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG
        MAI S V +I V+  I SA AQSPAASPSLSP KSPSKAP    S+ SPKSSPA APTP+S          SPSTSPSPA+SP+SISSPPADAPAPSGNG
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAP----SLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASI+FSVFGSVAV LYAVVLMI
Subjt:  AASITFSVFGSVAVALYAVVLMI
A0A6J1JSK4 classical arabinogalactan protein 1-like5.08e-3369.92Show/hide
Query:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG
        MA    V ++ V+  I SA AQSP+ASPSLSPTKSPSKAPS++    SPKSSPA APTP+SLKSPPSPP +SPS SPSP  SP+SISSPPADAPAPSGN 
Subjt:  MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLN----SPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNG

Query:  AASITFSVFGSVAVALYAVVLMI
        AASI+ S+FGSVA  L+A+V MI
Subjt:  AASITFSVFGSVAVALYAVVLMI
SwissProt top hitse value%identityAlignment
Q8LCN5 Classical arabinogalactan protein 11.5e-0848.82Show/hide
Query:  SLVALIFVSFFIASAFAQSPAASPS------LSPTKSPSK------APSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAP
        SLV ++  +  I+SA AQSPA +PS      +SP  SP K      AP + SP  SPA A TP S  SPPSPP +   T+ SPA SP++IS  P +AP P
Subjt:  SLVALIFVSFFIASAFAQSPAASPS------LSPTKSPSK------APSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAP

Query:  SGNGAASITFSVFGSVAVALYAVVLMI
        +  GA S  F+ FGSVAV L A VL+I
Subjt:  SGNGAASITFSVFGSVAVALYAVVLMI
Arabidopsis top hitse value%identityAlignment
AT5G64310.1 arabinogalactan protein 11.1e-0948.82Show/hide
Query:  SLVALIFVSFFIASAFAQSPAASPS------LSPTKSPSK------APSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAP
        SLV ++  +  I+SA AQSPA +PS      +SP  SP K      AP + SP  SPA A TP S  SPPSPP +   T+ SPA SP++IS  P +AP P
Subjt:  SLVALIFVSFFIASAFAQSPAASPS------LSPTKSPSK------APSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAP

Query:  SGNGAASITFSVFGSVAVALYAVVLMI
        +  GA S  F+ FGSVAV L A VL+I
Subjt:  SGNGAASITFSVFGSVAVALYAVVLMI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTACAAGTCTTGTTGCCCTTATTTTTGTGTCATTCTTTATCGCCTCTGCTTTTGCTCAATCCCCGGCTGCATCTCCCTCATTGTCTCCCACCAAATCACCCTC
CAAGGCTCCATCCCTTAACTCCCCCAAATCCTCTCCCGCGGTGGCTCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTCCTTCTTCTCCCTCTACTTCTCCGT
CTCCGGCCAGTTCTCCCGCCTCCATCTCCTCACCGCCTGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTCGGATCTGTTGCCGTT
GCGCTATACGCCGTCGTTTTGATGATCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCCATTGTCTCTTCTCTTTTTACATTCATCTTTTCCTTTCTTTCAATCTTTCCATTTCATTTCCTATACACAAATGGCGATTACAAGTCTTGTTGCCCTTATTT
TTGTGTCATTCTTTATCGCCTCTGCTTTTGCTCAATCCCCGGCTGCATCTCCCTCATTGTCTCCCACCAAATCACCCTCCAAGGCTCCATCCCTTAACTCCCCCAAATCC
TCTCCCGCGGTGGCTCCTACTCCTTCCTCCTTGAAGTCTCCACCATCTCCTCCTCCTTCTTCTCCCTCTACTTCTCCGTCTCCGGCCAGTTCTCCCGCCTCCATCTCCTC
ACCGCCTGCTGACGCTCCCGCTCCGTCAGGTAACGGCGCTGCTTCGATCACTTTTTCGGTGTTCGGATCTGTTGCCGTTGCGCTATACGCCGTCGTTTTGATGATCTGAG
TGCCACTCGGATTCCATTCCTTCTCTTTGTCTGTCTATTTGAGTGATTTATTGTAGCATTTCACTGAGTACATTTTATGTTGATTTTGTATTTTTGGTTTTTTTTTTACT
TTCACAGTTATTA
Protein sequenceShow/hide protein sequence
MAITSLVALIFVSFFIASAFAQSPAASPSLSPTKSPSKAPSLNSPKSSPAVAPTPSSLKSPPSPPPSSPSTSPSPASSPASISSPPADAPAPSGNGAASITFSVFGSVAV
ALYAVVLMI