; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G009600 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G009600
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationGy14Chr4:8063012..8070971
RNA-Seq ExpressionCsGy4G009600
SyntenyCsGy4G009600
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]4.82e-15789.24Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]1.08e-16996.02Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]1.47e-16794.82Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]6.84e-15788.84Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G+RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]4.16e-16092Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHG+QDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        DDRHAHESSKRTSDYESRRN +++SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 23.65e-17696.89Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQE------YYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQE        KELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQE------YYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 27.10e-16894.82Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSMAPVM QYGKHGGSHGHG+RHGRDYHHRKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 29.50e-15788.84Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGS+  V+PQYGKHGGSHG+G RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1G5C4 Nuclear cap-binding protein subunit 22.72e-15689.24Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGT SLGSM PVM Q+G HGGSHGHG RHGRDYHHRKR+RD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSD+ESRRNSN+ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 23.31e-15788.84Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+G+RHGRDYH+RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRD

Query:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH
        DDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  DDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B7P877 Nuclear cap-binding protein subunit 23.8e-4965.52Show/hide
Query:  LSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
        LS YRD+ F GS+ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D
Subjt:  LSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQR
         GF +GRQ+GRG+SGGQVRDEYRTDYD     S +  Y +L AQR
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQR

P52298 Nuclear cap-binding protein subunit 22.7e-4769.53Show/hide
Query:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYD
        D GF++GRQ+GRGRSGGQVRDEYR DYD
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYD

Q3ZBJ1 Nuclear cap-binding protein subunit 22.7e-4769.53Show/hide
Query:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF
        +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+
Subjt:  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYD
        D GF++GRQ+GRGRSGGQVRDEYR DYD
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYD

Q84L14 Nuclear cap-binding protein subunit 21.0e-8671.03Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFKDPTKLS YRDRRF G+Q+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+L
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGN--RHGRDYHHRKRY
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQR+LVDYG G+    AP  PQY +     G+G+  R+ RDY  RKRY
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGN--RHGRDYHHRKRY

Query:  RDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        R+D+R    SS+R  D E +R++      EKNPRFRE GDSDEEDDD  K+R
Subjt:  RDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Q9XFD1 Nuclear cap-binding protein subunit 23.4e-9873.05Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-0832.91Show/hide
Query:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++++
Subjt:  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.7e-0934.57Show/hide
Query:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 202.4e-9973.05Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 202.4e-9973.05Show/hide
Query:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL
        MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTIL
Subjt:  MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP      +   KELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  NRHGR  +H
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMP-QYG---KHGGSHGHG--NRHGRDYHH

Query:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTA
TGTGGGAAATATGTCCTTCTATACGACAGAAGAGCAAGTATATGAGCTTTTCTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGATATCCTTTTTTCTTTTCAAGAGTA
TTACAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGAC
ATGGGAATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAAC
TCCAATTATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTA
TGTGGGAAATATGTCCTTCTATACGACAGAAGAGCAAGTATATGAGCTTTTCTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGC
CTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGAT
TGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGATATCCTTTTTTCTTTTCAAGAGTA
TTACAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGAC
ATGGGAATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAAC
TCCAATTATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAA
Protein sequenceShow/hide protein sequence
MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPDILFSFQEYYKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN
SNYESRPEKNPRFRESGDSDEEDDDDRKQRH