CuGenDBv2

Gene ID	CsGy4G009855
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	BED-type domain-containing protein
Genome location	Gy14Chr4:8286724..8287413
RNA-Seq Expression	CsGy4G009855
Synteny	CsGy4G009855
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0053508.1 uncharacterized protein E6C27_scaffold190G00650 [Cucumis melo var. makuwa]

1.43e-96

89.57

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFT NPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYD FAP+IESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

XP_031736734.1 uncharacterized protein LOC116402076 [Cucumis sativus]

2.46e-97

90.74

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD
        MSKKK+IKEQ+NLI+DIDVEDY IED+DEGSVSVNN+ATP GPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLN  YKKEMREHTIQRI RWFYD
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD

Query:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        AGVPLNACTY+SFAPMIESIGQF  GLKPPSYHELRVPCLKKELEATNELMS+HK EWAKVG
Subjt:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

XP_031741274.1 uncharacterized protein LOC116403810 [Cucumis sativus]

7.16e-99

91.36

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD
        MSKKK+IKEQ+NLI+DIDVEDY IEDEDEGSVSVNN+ATP GPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLN  YKKEMREHTIQRI RWFYD
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD

Query:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        AGVPLNACTY+SFAPMIESIGQF  GLKPPSYHELRVPCLKKELEATNELMS+HK EWAKVG
Subjt:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

XP_031741325.1 uncharacterized protein LOC116403834 [Cucumis sativus]

4.92e-99

90.74

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD
        MSKKKEIKEQ+NLI+DIDVEDY IED+DE SVSVNN+ATP GPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLN  YKKEMREHTIQRI RWFYD
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD

Query:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        AGVPLNACTY+SFAPMIESIGQF  GLKPPSYHELRVPCLKKELEATNELMS+HK EWAKVG
Subjt:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

XP_031742231.1 uncharacterized protein LOC116404127 [Cucumis sativus]

4.99e-97

88.89

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD
        MSKKKEIKEQ+NLI+DIDVEDY IED+DE SVSVNN+ATP GPSLKKPR+KGPMDAFFTPNPETVVQNRKDKGKQTSLN  YKKEMREHTIQRI RWFYD
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYD

Query:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        AGVPLNACTY+S APMIESIGQF  GLKPPSYHELRVPCLKKELE+TNELMS+HK EWAKVG
Subjt:  AGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TWK3 BED-type domain-containing protein

5.62e-95

91.41

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFTPNPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYDSFAPMIESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

A0A5A7TY62 BED-type domain-containing protein

3.49e-94

91.41

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFTPNPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYDSFAPMIESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

A0A5A7UEN1 DUF659 domain-containing protein

6.94e-97

89.57

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFT NPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYD FAP+IESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

A0A5D3BV42 BED-type domain-containing protein

3.20e-95

91.41

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFTPNPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYDSFAPMIESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

A0A5D3DR78 BED-type domain-containing protein

2.19e-94

91.41

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Query:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY
        MSKKKEIKEQ+NLI+DIDV+DYG+EDEDEGS+SVNNRAT SG SLKKPRQKGPMDAFFTPNPE+VVQNRK DKGKQTSLN AYKKEMREHTIQRI RWFY
Subjt:  MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRK-DKGKQTSLNVAYKKEMREHTIQRIDRWFY

Query:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG
        DAGVPLNACTYDSFAPMIESIGQF  GLKPP+YHELRVPCLKKELEATNELMSSHKAEWAKVG
Subjt:  DAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G43260.1 hAT transposon superfamily protein

7.9e-11

41.1

Show/hide

Query:  REHTI-QRIDRWFYDAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEW
        R H + Q + RW Y  G+P NA   D    M+E  GQF  G+ PPS ++LR P LK+E+     LM   + EW
Subjt:  REHTI-QRIDRWFYDAGVPLNACTYDSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEW

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACATTGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAG
AGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAATGGATGCCTTTTTTACTCCCAACCCAGAAACCGTGGTTCAAAATAGAAAGGACAAAGGAA
AACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACCATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATAT
GATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTCGATCTTGGATTGAAACCACCATCTTATCATGAGTTAAGAGTTCCATGTTTGAAGAAGGAATTAGAAGCAAC
AAATGAGTTGATGAGTAGCCATAAGGCAGAGTGGGCCAAGGTTGGATGA

mRNA sequence

Show/hide mRNA sequence

AGAAATGTCATCGCCTGTACAAAATGTCCAGATCACGTGAAGGAAGAAATTAAAGAGTACATGTCCAAGAAAAAAGAGATTAAAGAACAAAAAAATCTGATTCTGGACAT
TGATGTAGAAGATTACGGTATCGAGGATGAAGATGAAGGGAGTGTTAGTGTAAACAATAGAGCAACACCAAGTGGCCCGAGCTTGAAGAAGCCAAGGCAAAAGGGTCCAA
TGGATGCCTTTTTTACTCCCAACCCAGAAACCGTGGTTCAAAATAGAAAGGACAAAGGAAAACAAACTTCGTTGAATGTGGCATACAAGAAGGAAATGAGAGAGCACACC
ATCCAAAGAATTGATCGATGGTTTTATGATGCAGGAGTGCCTTTGAATGCTTGCACATATGATAGTTTTGCCCCTATGATTGAGTCAATTGGGCAATTCGATCTTGGATT
GAAACCACCATCTTATCATGAGTTAAGAGTTCCATGTTTGAAGAAGGAATTAGAAGCAACAAATGAGTTGATGAGTAGCCATAAGGCAGAGTGGGCCAAGGTTGGATGAA
CTGTTATGGCTGATGGATGGACCGATAGAAGAAATAGGACATTAATTAACTTTTTAGTTAACAGTCCTAAAGGCACCATGTTTATTGAGTCCATCAATGCTTCATCTTAT
GTGAAAGATGGAAAGAAGATGTTCGAGTTA

Protein sequence

Show/hide protein sequence

MSKKKEIKEQKNLILDIDVEDYGIEDEDEGSVSVNNRATPSGPSLKKPRQKGPMDAFFTPNPETVVQNRKDKGKQTSLNVAYKKEMREHTIQRIDRWFYDAGVPLNACTY
DSFAPMIESIGQFDLGLKPPSYHELRVPCLKKELEATNELMSSHKAEWAKVG

CsGy4G009855 (gene) of Cucumber (Gy14) v2.1 genome