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CsGy4G010145 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G010145
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrotransposon protein
Genome locationGy14Chr4:8799138..8799298
RNA-Seq ExpressionCsGy4G010145
SyntenyCsGy4G010145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033263.1 retrotransposon protein [Cucumis melo var. makuwa]2.30e-0953.85Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V + TVI  +IK LK TF +  +MQGPACSGFG N+E  CI+
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
KAA0056436.1 retrotransposon protein [Cucumis melo var. makuwa]7.06e-1057.69Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V +ITVI  +IK LK TF +  KM+GPACSGFG N+E  CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
KAA0062170.1 retrotransposon protein [Cucumis melo var. makuwa]2.02e-0955.77Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GCRV + TVI  +IK+LK TF +  +M+GPACSGFG N+E  CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
KAA0062744.1 retrotransposon protein [Cucumis melo var. makuwa]1.34e-1054.72Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCIIV
        M++E+  GCRV + T+I  +IK LK TF +   M+GPACSGFG N+E  CIIV
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCIIV
KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-0955.77Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V + TVI  +IK LK TF +  +M+GPACSGFG N+EV CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
TrEMBL top hitse value%identityAlignment
A0A5A7SS54 Retrotransposon protein1.11e-0953.85Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V + TVI  +IK LK TF +  +MQGPACSGFG N+E  CI+
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
A0A5A7UQ49 Retrotransposon protein3.42e-1057.69Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V +ITVI  +IK LK TF +  KM+GPACSGFG N+E  CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
A0A5A7V4E7 Retrotransposon protein9.77e-1055.77Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GCRV + TVI  +IK+LK TF +  +M+GPACSGFG N+E  CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
A0A5A7V658 Retrotransposon protein6.48e-1154.72Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCIIV
        M++E+  GCRV + T+I  +IK LK TF +   M+GPACSGFG N+E  CIIV
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCIIV
A0A5A7VKT2 Retrotransposon protein1.09e-0955.77Show/hide
Query:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
        M+ E+  GC+V + TVI  +IK LK TF +  +M+GPACSGFG N+EV CII
Subjt:  MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCII
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGTAGAGAGGACGCTAGGATGTAGAGTGATGTCCATCACTGTGATCAAAAGCAAAATCAAGTTACTGAAAAGCACCTTTCCATCACCTGAAAAAATGCAGGGTCC
AGCGTGTAGTGGCTTTGGCTTGAACAACGAGGTGAATTGCATCATTGTCGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGTAGAGAGGACGCTAGGATGTAGAGTGATGTCCATCACTGTGATCAAAAGCAAAATCAAGTTACTGAAAAGCACCTTTCCATCACCTGAAAAAATGCAGGGTCC
AGCGTGTAGTGGCTTTGGCTTGAACAACGAGGTGAATTGCATCATTGTCGA
Protein sequenceShow/hide protein sequence
MLVERTLGCRVMSITVIKSKIKLLKSTFPSPEKMQGPACSGFGLNNEVNCIIVX