; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G010285 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G010285
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionSpc97 / Spc98 family of spindle pole body (SBP) component
Genome locationGy14Chr4:9048608..9049015
RNA-Seq ExpressionCsGy4G010285
SyntenyCsGy4G010285
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53863.2 hypothetical protein Csa_019174 [Cucumis sativus]3.29e-84100Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
        SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL

XP_008460383.1 PREDICTED: uncharacterized protein LOC103499220 [Cucumis melo]8.44e-7190.48Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVD
         IDEIM SIC DRRKKPGKRP+EKVD
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVD

XP_011651663.2 uncharacterized protein LOC101210446 [Cucumis sativus]2.05e-7489.55Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDK
        SIDEIMASICSDRRKKPGKR +EKVD  YKKN K
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDK

XP_011653427.1 uncharacterized protein LOC105435221 [Cucumis sativus]3.71e-86100Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
        SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL

XP_038902583.1 uncharacterized protein LOC120089238 [Benincasa hispida]5.57e-7085.29Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEA EI K+ RIE ISWLCSLSESELD+LISIKMLVLQRAK +GHE+LA+KFDLK  RAIGFVLMEHLKGEL+ SDV DLSQSA LN CNLLDSNLEKI
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
        LSIDEIMASICSDRRKKPGKRP+EKVDSR K NDKL
Subjt:  LSIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL

TrEMBL top hitse value%identityAlignment
A0A0A0KW48 Uncharacterized protein6.70e-84100Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
        SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDKL

A0A0A0LBP9 Uncharacterized protein1.01e-7591.04Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDL+  RAIGFVLMEHLKG+LRTSDVSDLSQS  NACNLLDSNLEKIL
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDK
        SIDEIMASICSDRRKKPGKR +EKVD  YKKN K
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVDSRYKKNDK

A0A1S3BQH9 uncharacterized protein LOC1034924133.79e-7091.94Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKI
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKRPQE
        LSIDEIMASICSDRRKKPGKRP++
Subjt:  LSIDEIMASICSDRRKKPGKRPQE

A0A1S3CBX7 uncharacterized protein LOC1034992204.09e-7190.48Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL
        MEEANEILKN RIE ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  R IGFVLMEHLKGELRTSDV+DLSQSALNACNLLDSNLEK L
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKIL

Query:  SIDEIMASICSDRRKKPGKRPQEKVD
         IDEIM SIC DRRKKPGKRP+EKVD
Subjt:  SIDEIMASICSDRRKKPGKRPQEKVD

A0A5A7UQA1 Uncharacterized protein8.57e-6893.39Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI
        MEEANEILKN R+E ISWLCSLSESELDLLISIKMLVLQRAKA+GHENLAEKFDLK  RAIGFVLMEHLKGELRTSDVSDLSQSA LNACNLLDSN+EKI
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA-LNACNLLDSNLEKI

Query:  LSIDEIMASICSDRRKKPGKR
        LSIDEIMASICSDRRKKPGKR
Subjt:  LSIDEIMASICSDRRKKPGKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80245.1 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R + ++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT1G80245.2 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R + ++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT1G80245.3 Spc97 / Spc98 family of spindle pole body (SBP) component2.1e-2546.83Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS
        MEE  +ILKN R + ++W CSLSESELDLLIS+K L +QRAK  GH+ LA+KFDLK+ R++G VLMEH +   R  + + L+ S       L+ CNLL +
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLDS

Query:  NLEKILSIDEIMASICSDRRKKPGKR
        +++  + I+EI+  IC ++ KK  ++
Subjt:  NLEKILSIDEIMASICSDRRKKPGKR

AT4G00695.1 FUNCTIONS IN: molecular_function unknown6.8e-2447.24Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD
        MEE ++ILKN R + ++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R++G VLME+++   R  D + L+ S       L++CNLL 
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD

Query:  SNLEKILSIDEIMASICSDRRKKPGKR
        ++++  + I+EI+  IC+ + KK  ++
Subjt:  SNLEKILSIDEIMASICSDRRKKPGKR

AT4G00695.2 FUNCTIONS IN: molecular_function unknown6.8e-2447.24Show/hide
Query:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD
        MEE ++ILKN R + ++W CSLSESELDLLIS+K LV++RAK  G E+L A+KFDLKM R++G VLME+++   R  D + L+ S       L++CNLL 
Subjt:  MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENL-AEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSA------LNACNLLD

Query:  SNLEKILSIDEIMASICSDRRKKPGKR
        ++++  + I+EI+  IC+ + KK  ++
Subjt:  SNLEKILSIDEIMASICSDRRKKPGKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGGTATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGGGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGC
TCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACAGGAAAAGGTTGATTCGAGATACAAGAAGAACGACAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGCGAATGAAATTTTGAAGAATAAAAGAATTGAAGGTATCAGTTGGCTTTGTTCACTATCTGAATCAGAACTTGACCTGCTGATTAGCATTAAAATGCTAGT
TCTCCAACGTGCAAAAGCAGTTGGTCATGAAAATTTAGCTGAGAAATTTGATTTGAAGATGCAACGGGCTATTGGGTTTGTTTTGATGGAACATCTTAAAGGAGAACTTA
GGACATCGGATGTTTCGGATCTGTCCCAATCTGCCTTAAATGCGTGCAACTTGTTAGATAGCAATCTTGAGAAAATTTTGTCAATTGATGAGATAATGGCGAGTATCTGC
TCGGACAGAAGGAAGAAACCAGGAAAAAGGCCACAGGAAAAGGTTGATTCGAGATACAAGAAGAACGACAAGTTGTGA
Protein sequenceShow/hide protein sequence
MEEANEILKNKRIEGISWLCSLSESELDLLISIKMLVLQRAKAVGHENLAEKFDLKMQRAIGFVLMEHLKGELRTSDVSDLSQSALNACNLLDSNLEKILSIDEIMASIC
SDRRKKPGKRPQEKVDSRYKKNDKL