; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G010530 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G010530
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionnuclear intron maturase 4, mitochondrial isoform X2
Genome locationGy14Chr4:9641334..9646459
RNA-Seq ExpressionCsGy4G010530
SyntenyCsGy4G010530
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006315 - homing of group II introns (biological process)
GO:0007005 - mitochondrion organization (biological process)
GO:0009845 - seed germination (biological process)
GO:0032885 - regulation of polysaccharide biosynthetic process (biological process)
GO:0090615 - mitochondrial mRNA processing (biological process)
GO:1900864 - mitochondrial RNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041778.1 hypothetical protein E6C27_scaffold67G001360 [Cucumis melo var. makuwa]4.91e-22588.59Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGK----------------------CVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEE
        M+FGGLRRFC+IN RNFSN QSVNVCI NSSFVSDIGK                      C QIVQ SENYSTLARA  EIDKGME+MKLA+NLASLVEE
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGK----------------------CVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEE

Query:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRK
        SLDVDLRRSKT+MELKRSLEI+IKERVKAQYLNGKFLDLMGNVIACPNTLQN YDCIRINSNVDIKSND LISFESMAEELS+GNFDVNTNTFSILSSRK
Subjt:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRK

Query:  EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAG
        EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMD+LVMAKLITVMEDKIEDPKLFAVIRSI+LAG
Subjt:  EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAG

Query:  ALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        ALNLEFG FPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLKGN+SDY
Subjt:  ALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

XP_008442019.1 PREDICTED: uncharacterized protein LOC103486008 [Cucumis melo]5.58e-22993.8Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR
        M+FGGLRRFC+IN RNFSN QSVNVCI NSSFVSDIGKC QIVQ SENYSTLARA  EIDKGME+MKLA+NLASLVEESLDVDLRRSKT+MELKRSLEI+
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR

Query:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE
        IKERVKAQYLNGKFLDLMGNVIACPNTLQN YDCIRINSNVDIKSND LISFESMA+ELS+GNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE
Subjt:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE

Query:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS
        CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI+LAGALNLEFG FPKGHGLPQEGVLS
Subjt:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS

Query:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLK N+SDY
Subjt:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

XP_011653460.1 nuclear intron maturase 4, mitochondrial [Cucumis sativus]1.38e-246100Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK
        MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK

Query:  ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV
        ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV
Subjt:  ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV

Query:  FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
        FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
Subjt:  FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI

Query:  LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS
        LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS
Subjt:  LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS

XP_038882003.1 nuclear intron maturase 4, mitochondrial isoform X2 [Benincasa hispida]2.38e-21889.61Show/hide
Query:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEI
        KM+FGGL+RFCRINMRN +NL  VNVC  +SS VS IGK VQ VQ SENYSTL  A  EIDKGME+MKLA+NLASLVEESLDVDL+RSKTQMELKRSLEI
Subjt:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEI

Query:  RIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVL
        +IKERVKAQYLNGKFLDLMG VIACP TLQN YDC+RINSNVDI SND LISFESMAEELSNGNFDVN NTFSILSSRKEVL+LPKI+LKVLQEAIRIVL
Subjt:  RIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVL

Query:  ECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVL
        ECVFRPHFSKISHGCRSGRGHSTALKYI+KEIK+PDWWFT+DLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIY+AGALNLEFGGFPKGHGLPQEG+L
Subjt:  ECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVL

Query:  SPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        SPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGN+SDY
Subjt:  SPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

XP_038882004.1 nuclear intron maturase 4, mitochondrial isoform X3 [Benincasa hispida]4.58e-21889.58Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR
        M+FGGL+RFCRINMRN +NL  VNVC  +SS VS IGK VQ VQ SENYSTL  A  EIDKGME+MKLA+NLASLVEESLDVDL+RSKTQMELKRSLEI+
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR

Query:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE
        IKERVKAQYLNGKFLDLMG VIACP TLQN YDC+RINSNVDI SND LISFESMAEELSNGNFDVN NTFSILSSRKEVL+LPKI+LKVLQEAIRIVLE
Subjt:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE

Query:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS
        CVFRPHFSKISHGCRSGRGHSTALKYI+KEIK+PDWWFT+DLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIY+AGALNLEFGGFPKGHGLPQEG+LS
Subjt:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS

Query:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGN+SDY
Subjt:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

TrEMBL top hitse value%identityAlignment
A0A0A0KWB0 Reverse transcriptase domain-containing protein6.69e-247100Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK
        MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIK

Query:  ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV
        ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV
Subjt:  ERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECV

Query:  FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
        FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI
Subjt:  FRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPI

Query:  LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS
        LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS
Subjt:  LTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYS

A0A1S3B491 uncharacterized protein LOC1034860082.70e-22993.8Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR
        M+FGGLRRFC+IN RNFSN QSVNVCI NSSFVSDIGKC QIVQ SENYSTLARA  EIDKGME+MKLA+NLASLVEESLDVDLRRSKT+MELKRSLEI+
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIR

Query:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE
        IKERVKAQYLNGKFLDLMGNVIACPNTLQN YDCIRINSNVDIKSND LISFESMA+ELS+GNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE
Subjt:  IKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLE

Query:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS
        CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI+LAGALNLEFG FPKGHGLPQEGVLS
Subjt:  CVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLS

Query:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLK N+SDY
Subjt:  PILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

A0A5A7TFZ7 Reverse transcriptase domain-containing protein2.37e-22588.59Show/hide
Query:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGK----------------------CVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEE
        M+FGGLRRFC+IN RNFSN QSVNVCI NSSFVSDIGK                      C QIVQ SENYSTLARA  EIDKGME+MKLA+NLASLVEE
Subjt:  MKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGK----------------------CVQIVQGSENYSTLARA--EIDKGMERMKLAINLASLVEE

Query:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRK
        SLDVDLRRSKT+MELKRSLEI+IKERVKAQYLNGKFLDLMGNVIACPNTLQN YDCIRINSNVDIKSND LISFESMAEELS+GNFDVNTNTFSILSSRK
Subjt:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRK

Query:  EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAG
        EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMD+LVMAKLITVMEDKIEDPKLFAVIRSI+LAG
Subjt:  EVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAG

Query:  ALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        ALNLEFG FPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQS+LRSWFRRQLKGN+SDY
Subjt:  ALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

A0A6J1CXL0 nuclear intron maturase 4, mitochondrial isoform X28.81e-19982.02Show/hide
Query:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEID--KGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEI
        +M+FGG +RFCR+NMRNF+ L+   +C  NSSFVSDIGKCVQ VQ SENYS LA A+ D  KGME+ KLA NLASLVEESLDVD RR K++MELKRSLEI
Subjt:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYSTLARAEID--KGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEI

Query:  RIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVL
        +IK+RVKAQY+NGKF+DLMG VIACP TLQN YDC+RINSNVDI SND LISFESMAEEL NG+FDVN NTFSI SS+KEVLILPK+KLKVLQEAIRIVL
Subjt:  RIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVL

Query:  ECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVL
        ECVFRPHFSKISHGCRSGRGHSTALKYI+KEI +PDWWFTVD+SKKMDEL MAKLI+VMEDKIEDP+ FA+IRSI+ AGALNLEFGGFPKGHGLPQEGVL
Subjt:  ECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVL

Query:  SPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        SPIL NIYLNLFDQEFFRLSMKYEAIN+YGN  QDGSQS+LRSWFRR+LKGN+S+Y
Subjt:  SPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

A0A6J1CYJ7 nuclear intron maturase 4, mitochondrial isoform X15.90e-19781.79Show/hide
Query:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDI-GKCVQIVQGSENYSTLARAEID--KGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLE
        +M+FGG +RFCR+NMRNF+ L+   +C  NSSFVSDI GKCVQ VQ SENYS LA A+ D  KGME+ KLA NLASLVEESLDVD RR K++MELKRSLE
Subjt:  KMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDI-GKCVQIVQGSENYSTLARAEID--KGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLE

Query:  IRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIV
        I+IK+RVKAQY+NGKF+DLMG VIACP TLQN YDC+RINSNVDI SND LISFESMAEEL NG+FDVN NTFSI SS+KEVLILPK+KLKVLQEAIRIV
Subjt:  IRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIV

Query:  LECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGV
        LECVFRPHFSKISHGCRSGRGHSTALKYI+KEI +PDWWFTVD+SKKMDEL MAKLI+VMEDKIEDP+ FA+IRSI+ AGALNLEFGGFPKGHGLPQEGV
Subjt:  LECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGV

Query:  LSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY
        LSPIL NIYLNLFDQEFFRLSMKYEAIN+YGN  QDGSQS+LRSWFRR+LKGN+S+Y
Subjt:  LSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDY

SwissProt top hitse value%identityAlignment
P05511 Uncharacterized 91 kDa protein in cob intron2.0e-1531.67Show/hide
Query:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI
        S  K  L +   + K++QE +RIVLE ++ P F+  SHG R GR   +AL+ I    K   WW   D+    D +   KLI ++  KI+D +   +IR  
Subjt:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI

Query:  YLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSD
          AG L      +    G PQ  ++SPIL NIYL+  D+    L  +++         +  S+SR   +   + K  N+D
Subjt:  YLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSD

P0A3U0 Group II intron-encoded protein LtrA2.2e-1737.33Show/hide
Query:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI
        S +   L +P    K++QEA+RI+LE ++ P F  +SHG R  R   TALK IK+E     W+   D+    D +    LI ++  KI+D K+  +I   
Subjt:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI

Query:  YLAGALNLEFGGFPKGH-GLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE
          AG   LE   + K + G PQ G+LSP+L NIYL+  D+   +L MK++
Subjt:  YLAGALNLEFGGFPKGH-GLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE

P0A3U1 Group II intron-encoded protein LtrA2.2e-1737.33Show/hide
Query:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI
        S +   L +P    K++QEA+RI+LE ++ P F  +SHG R  R   TALK IK+E     W+   D+    D +    LI ++  KI+D K+  +I   
Subjt:  SSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSI

Query:  YLAGALNLEFGGFPKGH-GLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE
          AG   LE   + K + G PQ G+LSP+L NIYL+  D+   +L MK++
Subjt:  YLAGALNLEFGGFPKGH-GLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE

Q9CA78 Nuclear intron maturase 4, mitochondrial4.5e-8757.86Show/hide
Query:  LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFD
        LA  LASLVEES     D  + +++MELKRSLE+R+K+RVK Q +NGKF DL+  VIA P TL++ YDCIR+NSNV I   +  ++F+S+AEELS+G FD
Subjt:  LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFD

Query:  VNTNTFSILS--SRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIE
        V +NTFSI++    KEVL+LP + LKV+QEAIRIVLE VF PHFSKISH CRSGRG ++ALKYI   I   DW FT+ L+KK+D  V   L++VME+K+E
Subjt:  VNTNTFSILS--SRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIE

Query:  DPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQL--KGNNSDYSEDFA
        D  L  ++RS++ A  LNLEFGGFPKGHGLPQEGVLS +L NIYL+ FD EF+R+SM++EA+     T +D   S+LRSWFRRQ   +G  S   +D A
Subjt:  DPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQL--KGNNSDYSEDFA

Q9LZA5 Nuclear intron maturase 3, mitochondrial2.0e-3134.85Show/hide
Query:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI
        SL ++  ++ T+  +K  LE  + +    QY +GKF  L+ N ++ P  L    QN+   +  NS+ D+     R  S E M  E+  G FD+ +     
Subjt:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI

Query:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR
        +SS    L+LP +KLKVL EAIR+VLE V+   F+  S+G R G G  TA++Y+K  +++P WWF V  +++M +E  +  L   + +KI D  L  +I+
Subjt:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR

Query:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS
         ++  G L +E GG   G G PQE  L  IL N+Y +  D+E   L +K +  N    TG + S
Subjt:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS

Arabidopsis top hitse value%identityAlignment
AT1G74350.1 Intron maturase, type II family protein3.2e-8857.86Show/hide
Query:  LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFD
        LA  LASLVEES     D  + +++MELKRSLE+R+K+RVK Q +NGKF DL+  VIA P TL++ YDCIR+NSNV I   +  ++F+S+AEELS+G FD
Subjt:  LAINLASLVEESLD--VDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGNFD

Query:  VNTNTFSILS--SRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIE
        V +NTFSI++    KEVL+LP + LKV+QEAIRIVLE VF PHFSKISH CRSGRG ++ALKYI   I   DW FT+ L+KK+D  V   L++VME+K+E
Subjt:  VNTNTFSILS--SRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIE

Query:  DPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQL--KGNNSDYSEDFA
        D  L  ++RS++ A  LNLEFGGFPKGHGLPQEGVLS +L NIYL+ FD EF+R+SM++EA+     T +D   S+LRSWFRRQ   +G  S   +D A
Subjt:  DPKLFAVIRSIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQL--KGNNSDYSEDFA

AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase)1.4e-3234.85Show/hide
Query:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI
        SL ++  ++ T+  +K  LE  + +    QY +GKF  L+ N ++ P  L    QN+   +  NS+ D+     R  S E M  E+  G FD+ +     
Subjt:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI

Query:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR
        +SS    L+LP +KLKVL EAIR+VLE V+   F+  S+G R G G  TA++Y+K  +++P WWF V  +++M +E  +  L   + +KI D  L  +I+
Subjt:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR

Query:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS
         ++  G L +E GG   G G PQE  L  IL N+Y +  D+E   L +K +  N    TG + S
Subjt:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS

AT5G04050.2 RNA-directed DNA polymerase (reverse transcriptase)1.4e-3234.85Show/hide
Query:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI
        SL ++  ++ T+  +K  LE  + +    QY +GKF  L+ N ++ P  L    QN+   +  NS+ D+     R  S E M  E+  G FD+ +     
Subjt:  SLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTL----QNVYDCIRINSNVDIKSN-DRLISFESMAEELSNGNFDVNTNTFSI

Query:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR
        +SS    L+LP +KLKVL EAIR+VLE V+   F+  S+G R G G  TA++Y+K  +++P WWF V  +++M +E  +  L   + +KI D  L  +I+
Subjt:  LSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKM-DELVMAKLITVMEDKIEDPKLFAVIR

Query:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS
         ++  G L +E GG   G G PQE  L  IL N+Y +  D+E   L +K +  N    TG + S
Subjt:  SIYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGS

ATMG00520.1 Intron maturase, type II family protein6.5e-1736.76Show/hide
Query:  KVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFP
        K+++EAIR+VLE ++ P F   SH  RSG+G  + L+ IK+E     W+   D+ K    +   +LI +++++I+DPK F  I+ ++ AG L     G  
Subjt:  KVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRSIYLAGALNLEFGGFP

Query:  KG-HGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE
        +G + +P   +LS +  NIYL+  DQE  R+  KYE
Subjt:  KG-HGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGCGGAGTCCAAAGACCTGTTACATCAACATTTGATAAGGGAAGATATCACACACAAGCAATTGCCAAAGGGCCCCAAGGATTGTCTAGTTCACCACGCGAAAA
GCATCCACCGCCCGCCGTCGTGCGCCGCGCGCCTCCAATCGTGCTGCCTTTGTCTTTTTCAACAAAAATGAAATTTGGGGGGCTTCGAAGATTTTGCAGGATCAACATGC
GGAACTTTTCAAATTTGCAAAGTGTAAATGTTTGCATATTCAATTCATCCTTTGTTTCTGACATTGGAAAGTGTGTTCAAATAGTTCAGGGTTCTGAAAATTATTCAACT
CTCGCCCGTGCTGAAATTGACAAGGGAATGGAGAGAATGAAACTGGCCATAAACTTGGCCTCGCTTGTTGAAGAATCTCTTGATGTTGATCTGAGAAGATCAAAGACTCA
AATGGAACTTAAGAGATCACTTGAAATTCGGATTAAGGAGAGGGTGAAGGCACAATATTTGAATGGGAAGTTTTTGGACTTGATGGGGAATGTAATTGCCTGCCCCAATA
CTCTTCAAAATGTTTACGACTGTATTAGAATTAACTCAAATGTTGACATTAAGTCGAATGATCGTTTGATCTCATTTGAATCTATGGCTGAAGAGCTTTCTAATGGTAAT
TTTGATGTCAATACCAATACTTTCTCCATATTAAGTTCAAGAAAAGAAGTACTAATTTTACCAAAGATAAAGTTGAAGGTTCTTCAGGAAGCCATTAGGATAGTTTTGGA
GTGTGTGTTTAGGCCACATTTTTCCAAGATATCTCATGGTTGTCGAAGTGGAAGAGGACACTCAACAGCATTGAAGTACATCAAAAAAGAGATAAAAGATCCTGATTGGT
GGTTCACAGTTGACTTAAGCAAAAAGATGGATGAGCTTGTGATGGCTAAACTCATTACAGTAATGGAGGACAAGATAGAGGACCCCAAATTATTTGCTGTTATCAGAAGT
ATATATTTGGCCGGGGCACTGAATTTGGAGTTTGGGGGTTTCCCAAAAGGTCACGGTCTTCCACAAGAGGGAGTTCTGTCTCCTATATTAACGAACATTTATCTAAACCT
CTTTGACCAAGAATTTTTCAGATTATCTATGAAATACGAAGCTATTAATGAGTATGGTAATACTGGTCAAGATGGGTCACAATCAAGGCTACGGAGTTGGTTTAGGAGAC
AATTGAAAGGAAATAATTCTGATTATTCAGAAGACTTTGCATTTGGACGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGGCGGAGTCCAAAGACCTGTTACATCAACATTTGATAAGGGAAGATATCACACACAAGCAATTGCCAAAGGGCCCCAAGGATTGTCTAGTTCACCACGCGAAAA
GCATCCACCGCCCGCCGTCGTGCGCCGCGCGCCTCCAATCGTGCTGCCTTTGTCTTTTTCAACAAAAATGAAATTTGGGGGGCTTCGAAGATTTTGCAGGATCAACATGC
GGAACTTTTCAAATTTGCAAAGTGTAAATGTTTGCATATTCAATTCATCCTTTGTTTCTGACATTGGAAAGTGTGTTCAAATAGTTCAGGGTTCTGAAAATTATTCAACT
CTCGCCCGTGCTGAAATTGACAAGGGAATGGAGAGAATGAAACTGGCCATAAACTTGGCCTCGCTTGTTGAAGAATCTCTTGATGTTGATCTGAGAAGATCAAAGACTCA
AATGGAACTTAAGAGATCACTTGAAATTCGGATTAAGGAGAGGGTGAAGGCACAATATTTGAATGGGAAGTTTTTGGACTTGATGGGGAATGTAATTGCCTGCCCCAATA
CTCTTCAAAATGTTTACGACTGTATTAGAATTAACTCAAATGTTGACATTAAGTCGAATGATCGTTTGATCTCATTTGAATCTATGGCTGAAGAGCTTTCTAATGGTAAT
TTTGATGTCAATACCAATACTTTCTCCATATTAAGTTCAAGAAAAGAAGTACTAATTTTACCAAAGATAAAGTTGAAGGTTCTTCAGGAAGCCATTAGGATAGTTTTGGA
GTGTGTGTTTAGGCCACATTTTTCCAAGATATCTCATGGTTGTCGAAGTGGAAGAGGACACTCAACAGCATTGAAGTACATCAAAAAAGAGATAAAAGATCCTGATTGGT
GGTTCACAGTTGACTTAAGCAAAAAGATGGATGAGCTTGTGATGGCTAAACTCATTACAGTAATGGAGGACAAGATAGAGGACCCCAAATTATTTGCTGTTATCAGAAGT
ATATATTTGGCCGGGGCACTGAATTTGGAGTTTGGGGGTTTCCCAAAAGGTCACGGTCTTCCACAAGAGGGAGTTCTGTCTCCTATATTAACGAACATTTATCTAAACCT
CTTTGACCAAGAATTTTTCAGATTATCTATGAAATACGAAGCTATTAATGAGTATGGTAATACTGGTCAAGATGGGTCACAATCAAGGCTACGGAGTTGGTTTAGGAGAC
AATTGAAAGGAAATAATTCTGATTATTCAGAAGACTTTGCATTTGGACGTTAA
Protein sequenceShow/hide protein sequence
MRGGVQRPVTSTFDKGRYHTQAIAKGPQGLSSSPREKHPPPAVVRRAPPIVLPLSFSTKMKFGGLRRFCRINMRNFSNLQSVNVCIFNSSFVSDIGKCVQIVQGSENYST
LARAEIDKGMERMKLAINLASLVEESLDVDLRRSKTQMELKRSLEIRIKERVKAQYLNGKFLDLMGNVIACPNTLQNVYDCIRINSNVDIKSNDRLISFESMAEELSNGN
FDVNTNTFSILSSRKEVLILPKIKLKVLQEAIRIVLECVFRPHFSKISHGCRSGRGHSTALKYIKKEIKDPDWWFTVDLSKKMDELVMAKLITVMEDKIEDPKLFAVIRS
IYLAGALNLEFGGFPKGHGLPQEGVLSPILTNIYLNLFDQEFFRLSMKYEAINEYGNTGQDGSQSRLRSWFRRQLKGNNSDYSEDFAFGR