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CsGy4G010595 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G010595
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationGy14Chr4:9732251..9732733
RNA-Seq ExpressionCsGy4G010595
SyntenyCsGy4G010595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON51748.1 hypothetical protein PanWU01x14_214480, partial [Parasponia andersonii]3.42e-4471.13Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+FVGGNL TWRSKKQNVVAR S EAE+RA+ +GICE +WIK +L ELK+  T P+R++CDNKAAI IAHN V HDRTKH++VD+HFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

PON78970.1 Ribonuclease H-like domain containing protein, partial [Parasponia andersonii]1.04e-4572.16Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+F+GGNL+TWRSKKQNVVARSS EAE+RA+ +GICE +WIK +L ELK+  T P+R++CDNKAAI IAHN V HDRTKH++VDKHFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

RVW67169.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.47e-4574.47Show/hide
Query:  GYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        GYCSFVGGNL+TWRSKKQNVVA+SSTEAEFRA+  GICE +WI+ +L ELK+  + P+++YCDNKAAI +AHN VLHDRTKH++VDKHFIKEKI
Subjt:  GYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

XP_020272118.1 uncharacterized protein LOC109847293 [Asparagus officinalis]3.17e-4674.23Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+FVGGNL+TWRSKKQ+VVARSS EAEFR++  GICE +WIK IL ELKI    P++ YCDNKAAI IAHN VLHDRTKH++VDKHFIKEKI  
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

XP_039688592.1 uncharacterized mitochondrial protein AtMg00810-like [Medicago truncatula]1.90e-4472.16Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+FVGGNL+TWRSKKQNVVARSS EAEFR++  G CE +WIK+ + ELKI+   P+++YCDNKAAI IAHN VLHDRTKH++VDKHFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

TrEMBL top hitse value%identityAlignment
A0A1S8ACK5 Cysteine-rich RLK RECEPTOR-like protein kinase2.03e-4575.26Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+F+GGNL+TWRSKKQ+VVARSS EAEFR+L  GICE IWIK +  +LKI +++PV+IYCDNKAAI IAHN VLHDRTKHI+VDKHFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

A0A1S8ADC3 Cysteine-rich RLK RECEPTOR-like protein kinase (Fragment)6.72e-4567.37Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        SGYC+F+ GNL+TWRSKKQNVVARSS EAEFR++ +G+CE +W+K +L ELK  +++P+R+YCDNKAAI IAHN VLHDRTKH+++D+HFI EK+
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

A0A2P5BSI3 Uncharacterized protein (Fragment)1.65e-4471.13Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+FVGGNL TWRSKKQNVVAR S EAE+RA+ +GICE +WIK +L ELK+  T P+R++CDNKAAI IAHN V HDRTKH++VD+HFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

A0A2P5E0B0 Ribonuclease H-like domain containing protein (Fragment)5.05e-4672.16Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA
        SGYC+F+GGNL+TWRSKKQNVVARSS EAE+RA+ +GICE +WIK +L ELK+  T P+R++CDNKAAI IAHN V HDRTKH++VDKHFIKEKI +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA

A0A438G4N7 Retrovirus-related Pol polyprotein from transposon RE17.13e-4674.47Show/hide
Query:  GYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        GYCSFVGGNL+TWRSKKQNVVA+SSTEAEFRA+  GICE +WI+ +L ELK+  + P+++YCDNKAAI +AHN VLHDRTKH++VDKHFIKEKI
Subjt:  GYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

SwissProt top hitse value%identityAlignment
P04146 Copia protein2.2e-1646.51Show/hide
Query:  NLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        NLI W +K+QN VA SSTEAE+ AL   + E +W+K +L  + I L  P++IY DN+  I IA+N   H R KHI +  HF +E++
Subjt:  NLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.5e-1343.16Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        +GY     G  I+W+SK Q  VA S+TEAE+ A T    E IW+K  L EL +     V +YCD+++AI ++ N + H RTKHI V  H+I+E +
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

P92519 Uncharacterized mitochondrial protein AtMg008107.7e-0648.84Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIW
        +G+C+F+G N+I+W +K+Q  V+RSSTE E+RAL     E  W
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE15.1e-1847.37Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        +GY  ++G + I+W SKKQ  V RSSTEAE+R++     E  WI  +L EL I LT P  IYCDN  A ++  N V H R KHI +D HFI+ ++
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE22.6e-1746.32Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI
        +GY  ++G + I+W SKKQ  V RSSTEAE+R++     E  WI  +L EL I L+ P  IYCDN  A ++  N V H R KHI +D HFI+ ++
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.2e-2350Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEK
        +GYC F+G +LI+W+SKKQ VV++SS EAE+RAL+    E +W+ +   EL++ L+ P  ++CDN AAI IA N V H+RTKHI+ D H ++E+
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEK

ATMG00810.1 DNA/RNA polymerases superfamily protein5.5e-0748.84Show/hide
Query:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIW
        +G+C+F+G N+I+W +K+Q  V+RSSTE E+RAL     E  W
Subjt:  SGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGTTATTGTTCCTTTGTTGGAGGAAATTTGATTACTTGGAGAAGTAAAAAACAGAATGTGGTGGCCAGAAGTAGTACTGAAGCAGAATTTAGAGCCTTGACTCG
TGGAATTTGTGAGGGCATATGGATAAAAGAGATACTTGGAGAGTTGAAGATTTCTTTAACTATACCTGTACGAATTTATTGTGACAACAAAGCTGCCATTTTTATTGCCC
ATAATCTGGTTTTACATGATAGAACAAAACATATCAAGGTCGACAAGCATTTTATTAAAGAGAAAATTGCAGCATGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAATAATCACTTCCAAGTAGAAGTCTACACTGATGCATATTGGGCAGGAAGTGCAACAGATAGAAGATCTATGTCTGGTTATTGTTCCTTTGTTGGAGGAAATTT
GATTACTTGGAGAAGTAAAAAACAGAATGTGGTGGCCAGAAGTAGTACTGAAGCAGAATTTAGAGCCTTGACTCGTGGAATTTGTGAGGGCATATGGATAAAAGAGATAC
TTGGAGAGTTGAAGATTTCTTTAACTATACCTGTACGAATTTATTGTGACAACAAAGCTGCCATTTTTATTGCCCATAATCTGGTTTTACATGATAGAACAAAACATATC
AAGGTCGACAAGCATTTTATTAAAGAGAAAATTGCAGCATGAACAATATGTATTCCTTATCTACCTACATCAGAGCAAATTACCGATGTCCTAACCAAAGGTCTTCCATA
GAAACAATTTGATAGATTGATTGACAAGCTGGCTATGGAAGAC
Protein sequenceShow/hide protein sequence
MSGYCSFVGGNLITWRSKKQNVVARSSTEAEFRALTRGICEGIWIKEILGELKISLTIPVRIYCDNKAAIFIAHNLVLHDRTKHIKVDKHFIKEKIAA