; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G011876 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G011876
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr4:11883821..11884329
RNA-Seq ExpressionCsGy4G011876
SyntenyCsGy4G011876
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637138.1 hypothetical protein CSA_015445 [Cucumis sativus]2.18e-2536.6Show/hide
Query:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG
        MTRTHDVVRARSKSALSCSF         +  +H+A  ++P   AG       DR    ++  + ++    P  SAGIIQATPSKHIHSTSRSHSPPNVG
Subjt:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG

Query:  GKTDIPTKP-------------------------------------------------------------------------------------------
        GKTDIPTKP                                                                                           
Subjt:  GKTDIPTKP-------------------------------------------------------------------------------------------

Query:  -----------------------------STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
                                     STKQEAIERHLVSSRTS PKR PQQSASIIQASPSK
Subjt:  -----------------------------STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
KAE8637434.1 hypothetical protein CSA_004612 [Cucumis sativus]1.70e-2257.8Show/hide
Query:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG
        MTRTHDVVRARSKSALSCSF         +  +H+A  ++P   AG       DR    ++  + ++    P  SAGIIQATPSKHIHSTSRSHSPPNVG
Subjt:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG

Query:  GKTDIPTKP
        GKTDIPTKP
Subjt:  GKTDIPTKP
KAE8637438.1 hypothetical protein CSA_004616 [Cucumis sativus]1.54e-2536.6Show/hide
Query:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG
        MTRTHDVVRARSKSALSCSF         +  +H+A  ++P   AG       DR    ++  + ++    P  SAGIIQATPSKHIHSTSRSHSPPNVG
Subjt:  MTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGT------DRKSSRILKDKQARTT--PTTSAGIIQATPSKHIHSTSRSHSPPNVG

Query:  GKTDIPTKP-------------------------------------------------------------------------------------------
        GKTDIPTKP                                                                                           
Subjt:  GKTDIPTKP-------------------------------------------------------------------------------------------

Query:  -----------------------------STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
                                     STKQEAIERHLVSSRTS PKR PQQSASIIQASPSK
Subjt:  -----------------------------STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
KAE8637543.1 hypothetical protein CSA_017399, partial [Cucumis sativus]1.72e-1873.33Show/hide
Query:  PTTSAGIIQATPSKHIHSTSRSHSPPNVGGKTDIPTKP-STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
        P  SA IIQA+PSK I+STSRSHSPP+VG    IPTK  S KQEAI  HL SSRTS PK+ PQQSASIIQASPSK
Subjt:  PTTSAGIIQATPSKHIHSTSRSHSPPNVGGKTDIPTKP-STKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
KAE8649393.1 hypothetical protein Csa_011819, partial [Cucumis sativus]1.55e-1054.02Show/hide
Query:  SSRILKDKQARTTPTTSAGIIQATPSKHIHSTSRSHSPPNVGGKTDIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
        +SRILK+KQA+TTPTT      + P +          P    G T  P  PS K+E I  HLV SRTS PKR PQQSASIIQASPSK
Subjt:  SSRILKDKQARTTPTTSAGIIQATPSKHIHSTSRSHSPPNVGGKTDIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
TrEMBL top hitse value%identityAlignment
A0A5A7UP03 Uncharacterized protein1.35e-0656.16Show/hide
Query:  SAGIIQATPSKHIHSTSRSHSPPNVGGKT--DIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
        S+ IIQA PSK+I+STS S  P    G T   +   PST QEAI RHL+S RTS  +   Q+ ASIIQASPSK
Subjt:  SAGIIQATPSKHIHSTSRSHSPPNVGGKT--DIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
A0A5D3DBP5 Uncharacterized protein7.67e-0756.16Show/hide
Query:  SAGIIQATPSKHIHSTSRSHSPPNVGGKT--DIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
        S+ IIQA PSK+I+STS S  P    G T   +   PST QEAI RHL+S RTS  +   Q+ ASIIQASPSK
Subjt:  SAGIIQATPSKHIHSTSRSHSPPNVGGKT--DIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCGTCCCGCGTCCTCCACCGTGCATCAAAGCAAGTGGAGTCGCGACGTCGCCGTGCGCGATGACGAGAACACATGATGTCGTGCGCGCGCGCTCAAAATCAGCGCTCTC
TTGTTCGTTCTTAACCCACGTTCGTTTAGCCATCAGGCAACTGAAAAACCATCGTGCGCAGCGGGACGAGCCCTTCCGCCAAGCAGGGACCGATCGCAAGTCATCTCGTA
TCCTCAAGGACAAGCAAGCCCGAACGACGCCCACAACAAGTGCAGGCATCATCCAAGCAACCCCATCCAAGCACATCCACTCGACTTCCCGCTCTCACTCCCCACCCAAC
GTTGGGGGAAAAACCGACATTCCGACCAAACCTTCCACCAAGCAAGAAGCAATCGAAAGACATCTCGTATCCTCGAGAACAAGCAACCCCAAACGACACCCACAACAAAG
TGCAAGCATCATCCAAGCAAGCCCATCCAAGCAATCAACTCGACATCCCGCTCTCACTCCCCACCCGAC
mRNA sequenceShow/hide mRNA sequence
GCCGTCCCGCGTCCTCCACCGTGCATCAAAGCAAGTGGAGTCGCGACGTCGCCGTGCGCGATGACGAGAACACATGATGTCGTGCGCGCGCGCTCAAAATCAGCGCTCTC
TTGTTCGTTCTTAACCCACGTTCGTTTAGCCATCAGGCAACTGAAAAACCATCGTGCGCAGCGGGACGAGCCCTTCCGCCAAGCAGGGACCGATCGCAAGTCATCTCGTA
TCCTCAAGGACAAGCAAGCCCGAACGACGCCCACAACAAGTGCAGGCATCATCCAAGCAACCCCATCCAAGCACATCCACTCGACTTCCCGCTCTCACTCCCCACCCAAC
GTTGGGGGAAAAACCGACATTCCGACCAAACCTTCCACCAAGCAAGAAGCAATCGAAAGACATCTCGTATCCTCGAGAACAAGCAACCCCAAACGACACCCACAACAAAG
TGCAAGCATCATCCAAGCAAGCCCATCCAAGCAATCAACTCGACATCCCGCTCTCACTCCCCACCCGAC
Protein sequenceShow/hide protein sequence
AVPRPPPCIKASGVATSPCAMTRTHDVVRARSKSALSCSFLTHVRLAIRQLKNHRAQRDEPFRQAGTDRKSSRILKDKQARTTPTTSAGIIQATPSKHIHSTSRSHSPPN
VGGKTDIPTKPSTKQEAIERHLVSSRTSNPKRHPQQSASIIQASPSKQSTRHPALTPHPT