; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G011913 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G011913
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionU11/U12 small nuclear ribonucleoprotein 31 kDa protein
Genome locationGy14Chr4:12117912..12118697
RNA-Seq ExpressionCsGy4G011913
SyntenyCsGy4G011913
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0032502 - developmental process (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR003954 - RNA recognition motif domain, eukaryote
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034219 - ZCRB1, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR044598 - Zinc finger CCHC-type and RNA-binding motif-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637344.1 hypothetical protein CSA_011915, partial [Cucumis sativus]2.09e-16499.16Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG IDGHLSYECPKNQLGPRERPEPKRVRRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG
        VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG

XP_008456528.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Cucumis melo]2.07e-16793.49Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSHSH  SSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECPKNQLGPRERPEPKR RRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK KKASYF DES EDD
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

XP_031739837.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]2.99e-18198.85Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG IDGHLSYECPKNQLGPRERPEPKRVRRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYF DESDEDD
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

XP_031745314.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]2.41e-17796.25Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH------SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        MAPK KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH      SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGK
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH------SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG IDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYF DESDEDD
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

XP_031745992.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]8.79e-18097Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH------SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH      SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH------SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG IDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYF DESDEDD
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

TrEMBL top hitse value%identityAlignment
A0A1S3C324 U11/U12 small nuclear ribonucleoprotein 31 kDa protein1.00e-16793.49Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSHSH  SSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECPKNQLGPRERPEPKR RRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK KKASYF DES EDD
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

A0A5A7SYZ1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein1.00e-16793.49Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MA KGKKTN+PTSDSDEDETFYYRYPSA SS P LPSSSQSHFSSQSHSH  SSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECPKNQLGPRERPEPKR RRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK KKASYF DES EDD
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

A0A6J1BY38 U11/U12 small nuclear ribonucleoprotein 31 kDa protein4.82e-15185.82Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        MA KGK+TN P SDSD+DETFYYRYPSA SS P  PSSSQS     S +HSHSS KSGGGSGGLVPSKST+YVSN DYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTR+SRGVAF+QFISQDDAVKA K+M+GKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECP+NQLGPRERPEPKR RRGG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLTGGEN+ E+KK KKASYF DESDED+
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

A0A6J1FIA0 U11/U12 small nuclear ribonucleoprotein 31 kDa protein1.09e-15586.59Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        M+ K K+  +P SDSD+DETFYYRYPSA SS P  PSSSQSHFSSQSHSH  SSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRG AFVQFISQDDAVK  KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECPKNQLGPRERPEPKRVR+GG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLT  EN+VEKKK KKASYF DES ED+
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

A0A6J1JX53 U11/U12 small nuclear ribonucleoprotein 31 kDa protein5.42e-15686.59Show/hide
Query:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV
        M+ KGK+  +P SDSD+DETFYYRYPSA SS P  PSSSQSHFSSQSHSH  SSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGKIARVTV
Subjt:  MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTV

Query:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG
        LKDRQTRKSRG AFVQFISQDDAVK  KQMHGKILNGR LK AIA DNGRAAEFIRKRVYKDKSRCYECG +DGHLSYECPKNQLGPRERPEPKRVR+GG
Subjt:  LKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGG

Query:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD
        VGARHEEDWGSD GEGFEDD WASVVDGDADQRLLT  EN+VEKKK KKASYF DES ED+
Subjt:  VGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD

SwissProt top hitse value%identityAlignment
Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.8e-4145.62Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY

Query:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE
         DKS+CYECG   GHLSY CPKN LG RE P+ K + ++  V    EE    +V E   +D              A + +     R  TGG +  +  + 
Subjt:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE

Query:  ---KKASYFIDESDEDD
           KK++YF DE +  D
Subjt:  ---KKASYFIDESDEDD

Q5SP50 Zinc finger CCHC-type and RNA-binding motif-containing protein 13.3e-4045.41Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY
        SGGL PSKST+YVSN  +SLTNSD+H L   +GK+ +VT++KD+ TR S+GVAFV F+ ++ A   ++ ++ K L GR++KA+IA DNGRAAEFIRKR Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY

Query:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGE-----------------NIVE
         DKS+CYECG  +GHLSY CPKN LG RE P  K  ++     + EE    D  E  ED    S+    A Q+     E                     
Subjt:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGE-----------------NIVE

Query:  KKKEKKASYFIDESDEDD
        K + KK++YF DE +  D
Subjt:  KKKEKKASYFIDESDEDD

Q8TBF4 Zinc finger CCHC-type and RNA-binding motif-containing protein 15.1e-4147Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A    + ++ K L GRV+KA+IA DNGRAAEFIR+R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY

Query:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDED
         DKS+CYECG   GHLSY CPKN LG RE P+ K  ++       EE+   +  E  ED+     +D    Q +      I E++K+ K S  +  + +D
Subjt:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDED

Q9CAE4 U11/U12 small nuclear ribonucleoprotein 31 kDa protein4.8e-7157.99Show/hide
Query:  KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQ
        KK     SD +ED+TFYYRY S  +  PS P            S S  S+  GGGSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVTVLKDR 
Subjt:  KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQ

Query:  TRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRV---RRGGVG
        TR+SRGVAFV ++S++DA KAA+ M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYECPKNQLGPRERP P +    R+   G
Subjt:  TRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRV---RRGGVG

Query:  ARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKKASYFIDESDEDD
           E  W +         E FE++NWASVVD +A +RL        E    K+KEKK SYF DESD++D
Subjt:  ARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKKASYFIDESDEDD

Q9CZ96 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.1e-4044.7Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVY

Query:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE
         DKS+CYECG   GHLSY CPKN LG RE P+ K + ++  +    EE    +V E   +D              A + +  +  R   GG +  +  + 
Subjt:  KDKSRCYECGTIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE

Query:  ---KKASYFIDESDEDD
           KK++YF DE +  D
Subjt:  ---KKASYFIDESDEDD

Arabidopsis top hitse value%identityAlignment
AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein3.4e-7257.99Show/hide
Query:  KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQ
        KK     SD +ED+TFYYRY S  +  PS P            S S  S+  GGGSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVTVLKDR 
Subjt:  KKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQ

Query:  TRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRV---RRGGVG
        TR+SRGVAFV ++S++DA KAA+ M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYECPKNQLGPRERP P +    R+   G
Subjt:  TRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRV---RRGGVG

Query:  ARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKKASYFIDESDEDD
           E  W +         E FE++NWASVVD +A +RL        E    K+KEKK SYF DESD++D
Subjt:  ARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKKASYFIDESDEDD

AT3G23830.1 glycine-rich RNA-binding protein 42.0e-1138.89Show/hide
Query:  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRA
        G L    S L+V    +   +S L   F +FG++   TV+ DR+T +SRG  FV F  +D A  A K+M GK LNGR ++  +AT+   A
Subjt:  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRA

AT3G23830.2 glycine-rich RNA-binding protein 42.0e-1138.89Show/hide
Query:  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRA
        G L    S L+V    +   +S L   F +FG++   TV+ DR+T +SRG  FV F  +D A  A K+M GK LNGR ++  +AT+   A
Subjt:  GGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRA

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-0733.33Show/hide
Query:  SAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA
        SAP      P S+  H      S  H S +S  G    + + + LY+SN DY + N D+  LF   G++ R TV  DR  R S+G A V +  + DA+ A
Subjt:  SAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA

Query:  AKQMHGKILNGRVLKAAIATDNGRAA
         K+ +   L+G+ +K  I   N + A
Subjt:  AKQMHGKILNGRVLKAAIATDNGRAA

AT5G59950.4 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-0733.33Show/hide
Query:  SAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA
        SAP      P S+  H      S  H S +S  G    + + + LY+SN DY + N D+  LF   G++ R TV  DR  R S+G A V +  + DA+ A
Subjt:  SAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA

Query:  AKQMHGKILNGRVLKAAIATDNGRAA
         K+ +   L+G+ +K  I   N + A
Subjt:  AKQMHGKILNGRVLKAAIATDNGRAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTC
GTCTTCACAGTCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTT
CCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATTGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGC
GGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGA
TAATGGTCGTGCGGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCACAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATC
AATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGAC
AATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCATTGACGAGAG
CGACGAAGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTC
GTCTTCACAGTCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTT
CCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATTGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGC
GGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGA
TAATGGTCGTGCGGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCACAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATC
AATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGAC
AATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCATTGACGAGAG
CGACGAAGATGATTAA
Protein sequenceShow/hide protein sequence
MAPKGKKTNSPTSDSDEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSR
GVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGTIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDD
NWASVVDGDADQRLLTGGENIVEKKKEKKASYFIDESDEDD