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CsGy4G012035 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G012035
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptiontRNA (Guanine(10)-N2)-methyltransferase-like protein
Genome locationGy14Chr4:13054771..13056220
RNA-Seq ExpressionCsGy4G012035
SyntenyCsGy4G012035
Gene Ontology termsGO:0001510 - RNA methylation (biological process)
GO:0034470 - ncRNA processing (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR000241 - Putative RNA methylase domain
IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637123.1 hypothetical protein CSA_021499, partial [Cucumis sativus]2.41e-71100Show/hide
Query:  GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAH
        GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAH
Subjt:  GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAH

Query:  FGAMTM
        FGAMTM
Subjt:  FGAMTM

KAE8637124.1 hypothetical protein CSA_021500 [Cucumis sativus]1.19e-76100Show/hide
Query:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
        MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
Subjt:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG

Query:  SILVGAAHFGAMTM
        SILVGAAHFGAMTM
Subjt:  SILVGAAHFGAMTM

KAE8637127.1 hypothetical protein CSA_021503 [Cucumis sativus]2.27e-7099.07Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTM
        AHFGAMTM
Subjt:  AHFGAMTM

KGN44172.2 hypothetical protein Csa_018210 [Cucumis sativus]3.67e-7398.25Show/hide
Query:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
        MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFG  VGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
Subjt:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG

Query:  SILVGAAHFGAMTM
        SILVGAAHFGAMTM
Subjt:  SILVGAAHFGAMTM

TYK17862.1 tRNA (guanine(10)-N2)-methyltransferase-like protein [Cucumis melo var. makuwa]4.59e-7499.12Show/hide
Query:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
        MDVDG+FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
Subjt:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG

Query:  SILVGAAHFGAMTM
        SILVGAAHFGAMTM
Subjt:  SILVGAAHFGAMTM

TrEMBL top hitse value%identityAlignment
A0A1S3BG98 tRNA (Guanine(10)-N2)-methyltransferase homolog6.80e-6899.07Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTM
        AHFGAMTM
Subjt:  AHFGAMTM

A0A438BXN0 tRNA (Guanine(10)-N2)-methyltransferase-like3.78e-6385.32Show/hide
Query:  MFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVG
        +FQG+VNLK+P+HKF L+ET DYG NNGLPP+ Q+RIFFGREVG ADRKL+PTYQLKSRTYLGPTAMDAEMAFLMANQALAT+GKLV+DPFVGTGSILV 
Subjt:  MFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVG

Query:  AAHFGAMTM
        AAHFGAMTM
Subjt:  AAHFGAMTM

A0A5A7TF32 tRNA (Guanine(10)-N2)-methyltransferase-like protein6.07e-6799.07Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+GQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTM
        AHFGAMTM
Subjt:  AHFGAMTM

A0A5D3D1Y2 tRNA (Guanine(10)-N2)-methyltransferase-like protein2.22e-7499.12Show/hide
Query:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
        MDVDG+FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG
Subjt:  MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTG

Query:  SILVGAAHFGAMTM
        SILVGAAHFGAMTM
Subjt:  SILVGAAHFGAMTM

A0A6J1D5Q5 tRNA (Guanine(10)-N2)-methyltransferase homolog1.51e-6392.59Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+GQVNLK+PDHKFCL+E ADYGLNNGLPPIAQR IFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALAT+GKLV+DPFVGTGSILV A
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTM
        AHFGAMTM
Subjt:  AHFGAMTM

SwissProt top hitse value%identityAlignment
Q05B63 tRNA (guanine(10)-N2)-methyltransferase homolog1.2e-2245.54Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+G+VNLK P H F +LE  DYGL+    P     I+FGR +    R+LI +Y +K R ++G T+MDA ++F+MAN        +VFDPFVGTG +L+ +
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTMVTTL
        AHFGA    T +
Subjt:  AHFGAMTMVTTL

Q5R962 tRNA (guanine(10)-N2)-methyltransferase homolog1.2e-2245.54Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+G+VNLK P H F +LE  DYGL+    P     I+FGR +    R+LI +Y +K R ++G T+MDA ++F+MAN        +VFDPFVGTG +L+  
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTMVTTL
        AHFGA    T +
Subjt:  AHFGAMTMVTTL

Q7TNK6 tRNA (guanine(10)-N2)-methyltransferase homolog1.4e-2347.32Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+G+VNLK P H F +LE  DYGL+    P     I+FGR +    R+LI +Y +K R ++G T+MDA ++F+MAN A      LVFDPFVGTG +L+ +
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTMVTTL
        AHFGA    T +
Subjt:  AHFGAMTMVTTL

Q7Z4G4 tRNA (guanine(10)-N2)-methyltransferase homolog1.2e-2245.54Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+G+VNLK P H F +LE  DYGL+    P     I+FGR +    R+LI +Y +K R ++G T+MDA ++F+MAN        +VFDPFVGTG +L+  
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTMVTTL
        AHFGA    T +
Subjt:  AHFGAMTMVTTL

Q9CWH5 tRNA (guanine(10)-N2)-methyltransferase homolog2.3e-2347.32Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        FQG+VNLK P H F +LE  DYGL+    P     I+FGR +    R+LI +Y +K R ++G T+MDA ++F+M N A      LVFDPFVGTG +L+ +
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTMVTTL
        AHFGA    T +
Subjt:  AHFGAMTMVTTL

Arabidopsis top hitse value%identityAlignment
AT3G26410.1 methyltransferases;nucleic acid binding4.9e-4580.56Show/hide
Query:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA
        F+G+VNLK+PDH F L+E  +   NNGL PI QRRIFFGREVG ADRKL+PT+QLKSRTYLGPTAMDAEMAFLMANQA ATSGKLV+DPFVGTGSILV A
Subjt:  FQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGA

Query:  AHFGAMTM
        A FGAMTM
Subjt:  AHFGAMTM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTGGATGGAATGTTTCAGGGTCAAGTTAATTTAAAAAGTCCAGATCATAAATTTTGTCTTTTGGAAACTGCTGATTACGGACTCAATAATGGACTTCCACCAAT
TGCTCAAAGGAGAATTTTTTTTGGCCGGGAGGTCGGTGGTGCCGATAGGAAGCTTATACCAACATATCAATTAAAAAGTCGCACTTATCTTGGGCCAACTGCCATGGATG
CTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCAGCTCATTTTGGA
GCAATGACAATGGTAACTACTTTAAGGACATCACAATTTATCTCATAA
mRNA sequenceShow/hide mRNA sequence
ATCTGGTAGAGCCAAAAGGCCATGTATTAGTCAAATGAATGGTATGTAGTTCCACTGGTTGGGTTGTGGAAGCCAAACTTGTCTCAGCCGTTAAATGTATTTTTCTAGAT
TTTGGTCCGACTTTAGTCTTTATGGGTTCTTCATGGGGGGAGGGGGGAGTAAAGCCTCTTTGCTGATATTTTGAAAGATTTTTTCGAGCCTCTTCTGGTGTTTGGACTAC
TATGGCACGATAGCTACGAGGCTGCCGGTTGCATCTTCTTGCAAGTCTCTAGATTCACATGGGTTCGTTATGAGAGAGATATTTCGTTATGCTTTGTATTCATATTTCTT
CGTTTTGGTTTTTTTTAGCTTAAATTTTTCTGTTGGCATTCTCTTATTAGCTTGTCATCTCTTTTGTTTGCCTAATTTTAGCATTTGTTGTTGTTGACTGAATTCTTCTC
TATCTTTTGCTCTTAGTATAACATTCTTGTACTTTGAGCTTAAGTTTCATTTATTATTAATAAAGAGGCTTGTCTCCATTTAAAAAATAAATTAAGTAGTAGAAGTCCTA
TCAATATCAATTTCTTCTGTTAGCTCTTCTAGGTTCTACAGGTAATACCTGAATTTTGACACTGTTTTTAATATTCATTTGCTACACAAGCTCAACATGTCAATGTCTTC
CTGTTTTAATAAATGGACGTGGATGGAATGTTTCAGGGTCAAGTTAATTTAAAAAGTCCAGATCATAAATTTTGTCTTTTGGAAACTGCTGATTACGGACTCAATAATGG
ACTTCCACCAATTGCTCAAAGGAGAATTTTTTTTGGCCGGGAGGTCGGTGGTGCCGATAGGAAGCTTATACCAACATATCAATTAAAAAGTCGCACTTATCTTGGGCCAA
CTGCCATGGATGCTGAAATGGCTTTCTTAATGGCCAACCAAGCATTAGCGACATCTGGAAAACTTGTCTTTGATCCTTTTGTTGGCACTGGGAGCATTCTTGTTGGCGCA
GCTCATTTTGGAGCAATGACAATGGTAACTACTTTAAGGACATCACAATTTATCTCATAAAGAAATTGTCTGATTTTACAACATTTGGCTGATAGAAAACATGTGGGTGA
CTTAATATTCTAAATTGATAGCTTTGAACACATTCCTCTGAAGTCTTTTACTTTCTTTCTCATACATGACTTATGGGGCTACTTTTTCTATGCATTGGATATTATATTAT
AAGTTCGGGTTCAATCTTGTAGCGAACATTCATTGCATTCAGGGAACTTAATTTAAGGTAGTTTTCAGTTCCCATAGAATGCGTGTGAGAGAGATACCATTTGAATTCAA
ACTGACCAAAATGTATCAGGGGGCAGACATTGACATTAGGGTGGTACGTGATGGTCGTGGCCCTGATTGTAATGTTTGGAGCAACTTCAAGCAGGTAAATATGTTTTATA
AATTCTTAGAACTCAAGGAC
Protein sequenceShow/hide protein sequence
MDVDGMFQGQVNLKSPDHKFCLLETADYGLNNGLPPIAQRRIFFGREVGGADRKLIPTYQLKSRTYLGPTAMDAEMAFLMANQALATSGKLVFDPFVGTGSILVGAAHFG
AMTMVTTLRTSQFIS