; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G012067 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G012067
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionU11/U12 small nuclear ribonucleoprotein 31 kDa protein
Genome locationGy14Chr4:13155340..13157082
RNA-Seq ExpressionCsGy4G012067
SyntenyCsGy4G012067
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0032502 - developmental process (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR003954 - RNA recognition motif domain, eukaryote
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034219 - ZCRB1, RNA recognition motif
IPR035979 - RNA-binding domain superfamily
IPR044598 - Zinc finger CCHC-type and RNA-binding motif-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637131.1 hypothetical protein CSA_021507 [Cucumis sativus]4.53e-16483.9Show/hide
Query:  MDWSNIIFRRILQRKKSFVYSTRVKKWRPRERKPIALLATATRTKPSITG--------------------------------------------LVPSKS
        MDWSNIIFRRILQRKKSFVY TRVKKWRPRERKPIALLATATRTKPSITG                                            LVPSKS
Subjt:  MDWSNIIFRRILQRKKSFVYSTRVKKWRPRERKPIALLATATRTKPSITG--------------------------------------------LVPSKS

Query:  TLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYEC
        TLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR AEFIRKRVY DKSRCYEC
Subjt:  TLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYEC

Query:  GAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        GAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
Subjt:  GAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

KAE8637278.1 hypothetical protein CSA_021755 [Cucumis sativus]4.50e-15892.34Show/hide
Query:  MDWSNIIFRRILQRKKSFVYSTRVKKWRPRERKPIALLATATRTKPSITGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVA
        MDWSNIIFRRILQRKKSFVYSTRVKKWRPR+ +  +  + +   +    GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVA
Subjt:  MDWSNIIFRRILQRKKSFVYSTRVKKWRPRERKPIALLATATRTKPSITGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVA

Query:  FVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDV
        FVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDV
Subjt:  FVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDV

Query:  GEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        GEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
Subjt:  GEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

XP_031739837.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]3.90e-13798.99Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

XP_031745314.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]4.82e-13798.99Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

XP_031745564.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like, partial [Cucumis sativus]3.73e-139100Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

TrEMBL top hitse value%identityAlignment
A0A1S3C324 U11/U12 small nuclear ribonucleoprotein 31 kDa protein5.33e-13295.48Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKST+YVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGA+DGHLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK KKASYFSDES EDD
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

A0A5A7SYZ1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein5.33e-13295.48Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKST+YVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGA+DGHLSYECPKNQLGPRERPEPKR RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK KKASYFSDES EDD
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

A0A6J1BY38 U11/U12 small nuclear ribonucleoprotein 31 kDa protein9.50e-12790.45Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKST+YVSN DYSLTNSDLHTLFS FGKIARVTVLKDRQTR+SRGVAF+QFISQDDAVKA K+M+GKILNGRVLKAAIATDNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGA+DGHLSYECP+NQLGPRERPEPKR RRGGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLTGGEN+ E+KK KKASYFSDESDED+
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

A0A6J1FIA0 U11/U12 small nuclear ribonucleoprotein 31 kDa protein4.60e-12690.45Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKST+YVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRG AFVQFISQDDAVK  KQMHGKILNGR LK AIA DNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGA+DGHLSYECPKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLT  EN+VEKKK KKASYFSDES ED+
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

A0A6J1JX53 U11/U12 small nuclear ribonucleoprotein 31 kDa protein3.77e-12589.95Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GLVPSKST+YVSNFDYSLTNSDLHTLFS FGKIARVTVLKDRQTRKSRG AFVQFISQDDAVK  KQMHGKILNGR LK AIA DNGR AEFIRKRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD
        KSRCYECGA+DGHLSYECPKNQLGPRERPEPKRVR+GGVGARHEEDWGSD GEGFEDD WASVVDGDADQRLLT  EN+VEKKK KKASYFSDES ED+
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKEKKASYFSDESDEDD

SwissProt top hitse value%identityAlignment
Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.7e-4145.58Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKST+YVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A+   + ++ K L GRV+KA+IA DNGR AEFIR+R Y D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE--
        KS+CYECG   GHLSY CPKN LG RE P+ K + ++  V    EE    +V E   +D              A + +     R  TGG +  +  +   
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE--

Query:  -KKASYFSDESDEDD
         KK++YFSDE +  D
Subjt:  -KKASYFSDESDEDD

Q56JZ7 Zinc finger CCHC-type and RNA-binding motif-containing protein 15.4e-4044.19Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKST+YVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TR+S+GVAF+ F+ +D A    + ++ K L GRV+KA+IA DNGR AEFIR+R Y D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEE-----DWGSDVGEGFEDDN--------WASVVDGDADQRLLTGGENIVEKKKE--
        KS+CYECG   GHLSY CPKN LG RE P+ K  ++       EE     +   D GE    D+         A + +     +  +GG +  +  +   
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEE-----DWGSDVGEGFEDDN--------WASVVDGDADQRLLTGGENIVEKKKE--

Query:  -KKASYFSDESDEDD
         KK++YFSDE +  D
Subjt:  -KKASYFSDESDEDD

Q8TBF4 Zinc finger CCHC-type and RNA-binding motif-containing protein 18.3e-4144.5Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKST+YVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A    + ++ K L GRV+KA+IA DNGR AEFIR+R Y D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKE---------------
        KS+CYECG   GHLSY CPKN LG RE P+ K  ++       EE+   +  E  ED+     +D    Q +      I E++K+               
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKE---------------

Query:  ----KKASYFSDESDEDD
            KK++YFSDE +  D
Subjt:  ----KKASYFSDESDEDD

Q9CAE4 U11/U12 small nuclear ribonucleoprotein 31 kDa protein3.5e-6362.26Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKSTLYVSN D+SLTNSD+HTLFS FGK+ARVTVLKDR TR+SRGVAFV ++S++DA KAA+ M  KILNGR L  +IA DNGR +EFI+KRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKK
        KSRCYECG  +GHLSYECPKNQLGPRERP P +    R+   G   E  W +         E FE++NWASVVD +A +RL        E    K+KEKK
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKK

Query:  ASYFSDESDEDD
         SYFSDESD++D
Subjt:  ASYFSDESDEDD

Q9CZ96 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.1e-4044.65Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKST+YVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A+   + ++ K L GRV+KA+IA DNGR AEFIR+R Y D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE--
        KS+CYECG   GHLSY CPKN LG RE P+ K + ++  +    EE    +V E   +D              A + +  +  R   GG +  +  +   
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPK-RVRRGGVGARHEEDWGSDVGEGFEDD------------NWASVVDGDADQRLLTGGENIVEKKKE--

Query:  -KKASYFSDESDEDD
         KK++YFSDE +  D
Subjt:  -KKASYFSDESDEDD

Arabidopsis top hitse value%identityAlignment
AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein2.5e-6462.26Show/hide
Query:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD
        GL PSKSTLYVSN D+SLTNSD+HTLFS FGK+ARVTVLKDR TR+SRGVAFV ++S++DA KAA+ M  KILNGR L  +IA DNGR +EFI+KRVY D
Subjt:  GLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMD

Query:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKK
        KSRCYECG  +GHLSYECPKNQLGPRERP P +    R+   G   E  W +         E FE++NWASVVD +A +RL        E    K+KEKK
Subjt:  KSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRLLTGGENIVE----KKKEKK

Query:  ASYFSDESDEDD
         SYFSDESD++D
Subjt:  ASYFSDESDEDD

AT3G23830.1 glycine-rich RNA-binding protein 45.4e-1140.51Show/hide
Query:  STLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATD
        S L+V    +   +S L   F++FG++   TV+ DR+T +SRG  FV F  +D A  A K+M GK LNGR ++  +AT+
Subjt:  STLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATD

AT3G23830.2 glycine-rich RNA-binding protein 45.4e-1140.51Show/hide
Query:  STLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATD
        S L+V    +   +S L   F++FG++   TV+ DR+T +SRG  FV F  +D A  A K+M GK LNGR ++  +AT+
Subjt:  STLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.6e-1035.11Show/hide
Query:  LYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKS
        L+VS      T+  L  LFS FG+I    +++D +T++ +G  F+ F S+DDA KA K + GKI++GR++   +A +    AE +R  +  +K+
Subjt:  LYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKS

AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-1040Show/hide
Query:  PSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR
        P  S + V N  +S +   L   FS FG+IA V ++KD   ++S+G AF+QF SQDDA  A + M  ++ NGR++   IA    R
Subjt:  PSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGTCAAACATTATCTTTAGGAGAATATTACAAAGAAAAAAAAGTTTTGTTTACAGCACTCGGGTGAAAAAATGGCGCCCAAGGGAAAGAAAACCAATAGCCCT
ACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTTCCAATTTTGACTATTCACTCACTAATTCCGACCTCCACA
CTCTCTTCTCCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCG
GTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGTGTCGCTGAGTTTATAAGGAAGAGGGTTTA
TATGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAA
GAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCTGTGGTGGACGGAGATGCAGACCAGAGA
CTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGACGAAGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGTCAAACATTATCTTTAGGAGAATATTACAAAGAAAAAAAAGTTTTGTTTACAGCACTCGGGTGAAAAAATGGCGCCCAAGGGAAAGAAAACCAATAGCCCT
ACTAGCGACAGCGACGAGGACGAAACCTTCTATTACCGGTTTGGTTCCTTCGAAGTCTACTCTCTATGTTTCCAATTTTGACTATTCACTCACTAATTCCGACCTCCACA
CTCTCTTCTCCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTCCAGTTTATTTCTCAGGACGACGCG
GTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGTGTCGCTGAGTTTATAAGGAAGAGGGTTTA
TATGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAA
GAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCTGTGGTGGACGGAGATGCAGACCAGAGA
CTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAAGAGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGACGAAGATGATTAA
Protein sequenceShow/hide protein sequence
MDWSNIIFRRILQRKKSFVYSTRVKKWRPRERKPIALLATATRTKPSITGLVPSKSTLYVSNFDYSLTNSDLHTLFSNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA
VKAAKQMHGKILNGRVLKAAIATDNGRVAEFIRKRVYMDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQR
LLTGGENIVEKKKEKKASYFSDESDEDD