; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G012073 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G012073
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionU11/U12 small nuclear ribonucleoprotein 31 kDa protein
Genome locationGy14Chr4:13221372..13222174
RNA-Seq ExpressionCsGy4G012073
SyntenyCsGy4G012073
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0032502 - developmental process (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR044598 - Zinc finger CCHC-type and RNA-binding motif-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637129.1 hypothetical protein CSA_021505 [Cucumis sativus]3.58e-15098.19Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M PKGKKTNSPTSDS EDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDARVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDG
        IARVTVLKDRQTRKSRGVAFVQFISQDDARVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDG
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDARVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDG

Query:  DADQRLLTGGENIVEKKKRRK
        DADQRLLTGGENIVEKKK +K
Subjt:  DADQRLLTGGENIVEKKKRRK

KAE8637344.1 hypothetical protein CSA_011915, partial [Cucumis sativus]1.26e-12882.3Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M PKGKKTNSPTSDS EDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH      SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTG

XP_031739837.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]2.05e-13582.35Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M PKGKKTNSPTSDS EDETFYYRYPSAPSSDPSLPSSSQSHFSSQSH      SHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

XP_031745314.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]2.39e-14084.31Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M PK KKTNSPTSDS EDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLF NFGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

XP_031745992.1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Cucumis sativus]8.72e-14385.1Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M PKGKKTNSPTSDS EDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

TrEMBL top hitse value%identityAlignment
A0A1S3C324 U11/U12 small nuclear ribonucleoprotein 31 kDa protein2.09e-12577.65Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M  KGKKTN+PTSDS EDETFYYRYPSA SS P LPSSSQSHFSSQSH        SHSSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGA+DGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        R RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

A0A5A7SYZ1 U11/U12 small nuclear ribonucleoprotein 31 kDa protein2.09e-12577.65Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M  KGKKTN+PTSDS EDETFYYRYPSA SS P LPSSSQSHFSSQSH        SHSSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRGVAFVQFISQDDA                                  RVYKDKSRCYECGA+DGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        R RRGGVGARHEEDWGSDVGE FEDDNWASVVDGDADQRLLTGGENIVEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

A0A6J1BY38 U11/U12 small nuclear ribonucleoprotein 31 kDa protein1.44e-11070.98Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M  KGK+TN P SDS +DETFYYRYPSA SS P  PSSSQS           S +HSHSS KSGGGSGGLVPSKST+YVSN DYSLTNSDLHTLF  FGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTR+SRGVAF+QFISQDDA                                  RVYKDKSRCYECGA+DGHLSYECP+NQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        R RRGGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLTGGEN+ E+KK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

A0A6J1FIA0 U11/U12 small nuclear ribonucleoprotein 31 kDa protein8.50e-11873.33Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M  K K+  +P SDS +DETFYYRYPSA SS P  PSSSQSHFSSQSH        SHSSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRG AFVQFISQDDA                                  RVYKDKSRCYECGA+DGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        RVR+GGVGARHEEDWGSD GEGFEDDNWASVVDGDADQRLLT  EN+VEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

A0A6J1JX53 U11/U12 small nuclear ribonucleoprotein 31 kDa protein4.22e-11873.33Show/hide
Query:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK
        M  KGK+  +P SDS +DETFYYRYPSA SS P  PSSSQSHFSSQSH        SHSSTKSGGGSGGLVPSKST+YVSNFDYSLTNSDLHTLF  FGK
Subjt:  MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGK

Query:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK
        IARVTVLKDRQTRKSRG AFVQFISQDDA                                  RVYKDKSRCYECGA+DGHLSYECPKNQLGPRERPEPK
Subjt:  IARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPK

Query:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK
        RVR+GGVGARHEEDWGSD GEGFEDD WASVVDGDADQRLLT  EN+VEKKK +K
Subjt:  RVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRRK

SwissProt top hitse value%identityAlignment
Q499V6 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.2e-2544.93Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A                                  R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY

Query:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRR
         DKS+CYECG   GHLSY CPKN LG RE P+ K  ++
Subjt:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRR

Q6DJI9 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.2e-2543.92Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY
        SGGL PSKST+YVSN  +SLTN+DLH +F  +GK+ +VT+LKD+ +RKS+GV+FV F+ ++ A                                  R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY

Query:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEED
         DKSRCYECG   GHLSY CPKN LG RE P+ K  ++       EE+
Subjt:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEED

Q8TBF4 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.2e-2543.24Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A                                  R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY

Query:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEED
         DKS+CYECG   GHLSY CPKN LG RE P+ K  ++       EE+
Subjt:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEED

Q9CAE4 U11/U12 small nuclear ribonucleoprotein 31 kDa protein3.3e-4747.51Show/hide
Query:  KKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVT
        KK     SD  ED+TFYYRY S  +  PS P                  S S  S+  GGGSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVT
Subjt:  KKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVT

Query:  VLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---
        VLKDR TR+SRGVAFV ++S++DA                                  RVYKDKSRCYECG  +GHLSYECPKNQLGPRERP P +    
Subjt:  VLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---

Query:  RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRL-LTGGENIVEKKKRRKQ
        R+   G   E  W +         E FE++NWASVVD +A +RL     E   E++ +RK+
Subjt:  RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRL-LTGGENIVEKKKRRKQ

Q9CZ96 Zinc finger CCHC-type and RNA-binding motif-containing protein 11.2e-2544.93Show/hide
Query:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY
        SGGL PSKST+YVSN  +SLTN+DL+ +F  +GK+ +VT++KD+ TRKS+GVAF+ F+ +D A                                  R Y
Subjt:  SGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVY

Query:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRR
         DKS+CYECG   GHLSY CPKN LG RE P+ K  ++
Subjt:  KDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRR

Arabidopsis top hitse value%identityAlignment
AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein2.3e-4847.51Show/hide
Query:  KKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVT
        KK     SD  ED+TFYYRY S  +  PS P                  S S  S+  GGGSGGL PSKSTLYVSN D+SLTNSD+HTLF  FGK+ARVT
Subjt:  KKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVT

Query:  VLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---
        VLKDR TR+SRGVAFV ++S++DA                                  RVYKDKSRCYECG  +GHLSYECPKNQLGPRERP P +    
Subjt:  VLKDRQTRKSRGVAFVQFISQDDA----------------------------------RVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRV---

Query:  RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRL-LTGGENIVEKKKRRKQ
        R+   G   E  W +         E FE++NWASVVD +A +RL     E   E++ +RK+
Subjt:  RRGGVGARHEEDWGSD------VGEGFEDDNWASVVDGDADQRL-LTGGENIVEKKKRRKQ

AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-0643.1Show/hide
Query:  PSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA
        P  S + V N  +S +   L   F  FG+IA V ++KD   ++S+G AF+QF SQDDA
Subjt:  PSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDRQTRKSRGVAFVQFISQDDA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCTGCGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTC
GTCTTCACAGTCGCACTTCTCATCGCAATCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGA
AGTCTACTCTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGA
CAGACTCGCAAGTCTCGCGGCGTTGCCTTTGTCCAGTTTATTTCTCAGGACGACGCGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCA
TTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGG
ATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAGAGAAGA
AAGCAAGTTATTTCATTGACGAGAGCGACGAAGATGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCCAAGGGAAAGAAAACCAATAGCCCTACTAGCGACAGCTGCGAGGACGAAACCTTCTATTACCGGTATCCCTCCGCCCCCTCTTCTGACCCGTCGCTGCCGTC
GTCTTCACAGTCGCACTTCTCATCGCAATCGCACTTCTCATCGCAATCGCACTCACACTCACACTCTTCCACTAAGTCTGGCGGTGGTTCTGGAGGTTTGGTTCCTTCGA
AGTCTACTCTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTTCAACTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATCGA
CAGACTCGCAAGTCTCGCGGCGTTGCCTTTGTCCAGTTTATTTCTCAGGACGACGCGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAATTGATGGGCA
TTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGGGTAAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGG
ATGTTGGAGAAGGGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAGAGAAGA
AAGCAAGTTATTTCATTGACGAGAGCGACGAAGATGATTAA
Protein sequenceShow/hide protein sequence
MEPKGKKTNSPTSDSCEDETFYYRYPSAPSSDPSLPSSSQSHFSSQSHFSSQSHSHSHSSTKSGGGSGGLVPSKSTLYVSNFDYSLTNSDLHTLFFNFGKIARVTVLKDR
QTRKSRGVAFVQFISQDDARVYKDKSRCYECGAIDGHLSYECPKNQLGPRERPEPKRVRRGGVGARHEEDWGSDVGEGFEDDNWASVVDGDADQRLLTGGENIVEKKKRR
KQVISLTRATKMIX