; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G012080 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G012080
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA topoisomerase 2-binding protein 1 isoform X2
Genome locationGy14Chr4:13432912..13437609
RNA-Seq ExpressionCsGy4G012080
SyntenyCsGy4G012080
Gene Ontology termsGO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR001357 - BRCT domain
IPR036420 - BRCT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649618.1 hypothetical protein Csa_012555 [Cucumis sativus]7.22e-14796.15Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHI YSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWGKQCITAEWIYECV QRKIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANES+SQ PIHS IPRDQSAGTNSSFIGAA
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        ERISS KK
Subjt:  ERISSMKK

XP_008444202.1 PREDICTED: DNA topoisomerase 2-binding protein 1 isoform X3 [Cucumis melo]3.50e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

XP_031740436.1 LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1 [Cucumis sativus]2.59e-13996.15Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHI YSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWGKQCITAEWIYECV QRKIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANES+SQ PIHS IPRDQSAGTNSSFIGAA
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        ERISS KK
Subjt:  ERISSMKK

XP_031745331.1 LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like, partial [Cucumis sativus]1.07e-13493.75Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH V+SCLEDGCLWDTNGHI YSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWGKQCITAEWIYECV QRKIVSLDLYRPKEV AQDR T LCTVSQFPTQAAPMIANES+SQ PIHSAI RDQSAGTNSS IGAA
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        ERISS K+
Subjt:  ERISSMKK

XP_031745859.1 LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-A [Cucumis sativus]8.42e-13694.71Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHI YSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV QRKIVSLDLYRPKEV AQDRA GLCTVSQFPTQ  PMIANES+SQ PIHS IPRDQSAGTNSSFIGAA
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        ERISS KK
Subjt:  ERISSMKK

TrEMBL top hitse value%identityAlignment
A0A1S3BAL1 DNA topoisomerase 2-binding protein 1 isoform X31.69e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

A0A1S4DV57 DNA topoisomerase 2-binding protein 1 isoform X15.51e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

A0A1S4DV59 DNA topoisomerase 2-binding protein 1 isoform X25.15e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

A0A5A7U8G5 DNA topoisomerase 2-binding protein 1 isoform X24.93e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

A0A5D3BRP8 DNA topoisomerase 2-binding protein 1 isoform X28.00e-13091.83Show/hide
Query:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
        MKQKVHFTVECHGGIPRSTDVHSTYVSSH VRSCLEDGCLW TNGHI YSPLPCCVPL GFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH
Subjt:  MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTH

Query:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA
        LICKFTDGTKYEAACKWG QCITAEWIYECV Q KIVSLDLYRPKEV AQDRA GLCTVSQFPTQAAPMIANESISQ PIHS IPRDQSAGTN+S I A 
Subjt:  LICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAA

Query:  ERISSMKK
        E+ISS KK
Subjt:  ERISSMKK

SwissProt top hitse value%identityAlignment
Q5XIY8 PAX-interacting protein 16.4e-0536.67Show/hide
Query:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI
        V+ + D DR  L+ + ++ GA++   L +  T LICK   G KYE A +W   C+ A+W+
Subjt:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI

Q6NZQ4 PAX-interacting protein 12.9e-0538.33Show/hide
Query:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI
        V+ + D DR  L+ + ++ GAK+   L +  T LICK   G KYE A +W   C+ A+W+
Subjt:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI

Q6ZW49 PAX-interacting protein 13.8e-0538.33Show/hide
Query:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI
        V+ + D DR  L+ + ++ GAK+   L +  T LICK   G KYE A +W   C+ A+W+
Subjt:  VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWI

Q7ZZY3 DNA topoisomerase 2-binding protein 1-B7.3e-0931.3Show/hide
Query:  CLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFC---VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQC
        C+E   L D + +  ++P+P    L G   +R C   VSQ+   +R  L  L  +LGAK  E   +K          +HL  K  +G+KYEAA KW    
Subjt:  CLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFC---VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQC

Query:  ITAEWIYECVSQRKIVSLDLYRPKEVKAQDR
        +T  W+ +C    K    D Y    V  +D+
Subjt:  ITAEWIYECVSQRKIVSLDLYRPKEVKAQDR

Q800K6 DNA topoisomerase 2-binding protein 1-A1.1e-0931.3Show/hide
Query:  CLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFC---VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQC
        C+E   L D + +  ++P+P    L G   +R C   VSQ+   +R  L  L  +LGAK  E   +K          THL+ K  +G+KYEAA KW    
Subjt:  CLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFC---VSQYDDKDRVLLRNLCFVLGAKFVEKLTKKV---------THLICKFTDGTKYEAACKWGKQC

Query:  ITAEWIYECVSQRKIVSLDLYRPKEVKAQDR
        +T  W+ +C    +    D Y    V  +D+
Subjt:  ITAEWIYECVSQRKIVSLDLYRPKEVKAQDR

Arabidopsis top hitse value%identityAlignment
AT1G67180.1 zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein1.7e-0836.36Show/hide
Query:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVS
        EN+   VS Y   DR  L  L    GA +V  +++ +THL+C   +G KY+ A K+G   +   W+ ECV + + VS
Subjt:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVS

AT1G77320.1 transcription coactivators1.4e-5051.37Show/hide
Query:  HFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKF
        HFT+ECHGG   +    + YVSSH VR+CL+ GCL   + HI YSPLPC  PLPGFE++  C SQ+++K+  LLRNL  VLGA FVE+LT+KVTHLIC F
Subjt:  HFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKF

Query:  TDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQ
          G KY  A KWG   +T +W+YECV Q ++V  D + P+E+  QDR  G    SQF TQ  PM + +S+S LP+  +  R++
Subjt:  TDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQ

AT1G77320.2 transcription coactivators1.4e-5051.37Show/hide
Query:  HFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKF
        HFT+ECHGG   +    + YVSSH VR+CL+ GCL   + HI YSPLPC  PLPGFE++  C SQ+++K+  LLRNL  VLGA FVE+LT+KVTHLIC F
Subjt:  HFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKF

Query:  TDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQ
          G KY  A KWG   +T +W+YECV Q ++V  D + P+E+  QDR  G    SQF TQ  PM + +S+S LP+  +  R++
Subjt:  TDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQ

AT1G80420.1 BRCT domain-containing DNA repair protein7.8e-0625.97Show/hide
Query:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQ
        E + F +S + + +R  LR+    +GA +        T LIC F +  K+      G   I+ EWI EC +Q+K+V ++ Y     K   +++       
Subjt:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQ

Query:  FPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAAERISSMKKSASSLTK
           Q A     E +S+ P      + ++ GT S+        SS  +SA +L K
Subjt:  FPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAAERISSMKKSASSLTK

AT1G80420.4 BRCT domain-containing DNA repair protein4.6e-0630.86Show/hide
Query:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLY
        E + F +S + + +R  LR+    +GA +        T LIC F +  K+      G   I+ EWI EC +Q+K+V ++ Y
Subjt:  ENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTKYEAACKWGKQCITAEWIYECVSQRKIVSLDLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAGAAAGTGCACTTCACTGTTGAATGTCATGGTGGGATACCAAGGAGTACAGACGTTCATAGTACTTATGTGTCAAGTCATCGGGTTCGATCATGTTTAGAGGA
TGGATGTTTGTGGGATACCAATGGGCACATTTTCTATTCTCCTCTTCCTTGCTGTGTCCCTTTGCCTGGATTTGAAAACATACGGTTTTGTGTTTCACAATATGATGACA
AAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACCGATGGGACAAAG
TATGAGGCTGCTTGTAAATGGGGGAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGCCAGAGAAAGATTGTCTCTCTTGATTTGTATCGCCCAAAAGAAGT
TAAAGCTCAAGACAGAGCGACAGGCTTATGCACTGTCAGCCAATTTCCTACTCAAGCTGCCCCAATGATAGCCAATGAAAGCATATCCCAGTTGCCTATCCATTCTGCCA
TTCCGAGAGACCAATCAGCTGGAACTAACAGTAGCTTTATAGGAGCAGCTGAACGAATAAGTTCTATGAAGAAAAGCGCAAGTTCTTTGACGAAGCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAGAAAGTGCACTTCACTGTTGAATGTCATGGTGGGATACCAAGGAGTACAGACGTTCATAGTACTTATGTGTCAAGTCATCGGGTTCGATCATGTTTAGAGGA
TGGATGTTTGTGGGATACCAATGGGCACATTTTCTATTCTCCTCTTCCTTGCTGTGTCCCTTTGCCTGGATTTGAAAACATACGGTTTTGTGTTTCACAATATGATGACA
AAGACAGAGTATTGTTAAGAAATCTGTGTTTTGTACTTGGGGCCAAGTTTGTGGAGAAGCTGACAAAGAAGGTAACCCATCTAATATGCAAGTTCACCGATGGGACAAAG
TATGAGGCTGCTTGTAAATGGGGGAAACAATGCATTACAGCTGAATGGATATATGAGTGTGTCAGCCAGAGAAAGATTGTCTCTCTTGATTTGTATCGCCCAAAAGAAGT
TAAAGCTCAAGACAGAGCGACAGGCTTATGCACTGTCAGCCAATTTCCTACTCAAGCTGCCCCAATGATAGCCAATGAAAGCATATCCCAGTTGCCTATCCATTCTGCCA
TTCCGAGAGACCAATCAGCTGGAACTAACAGTAGCTTTATAGGAGCAGCTGAACGAATAAGTTCTATGAAGAAAAGCGCAAGTTCTTTGACGAAGCCATAG
Protein sequenceShow/hide protein sequence
MKQKVHFTVECHGGIPRSTDVHSTYVSSHRVRSCLEDGCLWDTNGHIFYSPLPCCVPLPGFENIRFCVSQYDDKDRVLLRNLCFVLGAKFVEKLTKKVTHLICKFTDGTK
YEAACKWGKQCITAEWIYECVSQRKIVSLDLYRPKEVKAQDRATGLCTVSQFPTQAAPMIANESISQLPIHSAIPRDQSAGTNSSFIGAAERISSMKKSASSLTKP