; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G012340 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G012340
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionReticulon-like protein
Genome locationGy14Chr4:16496015..16496316
RNA-Seq ExpressionCsGy4G012340
SyntenyCsGy4G012340
Gene Ontology termsGO:0009617 - response to bacterium (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003388 - Reticulon
IPR045064 - Reticulon-like protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037183.1 reticulon-like protein B11 [Cucumis melo var. makuwa]2.91e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

XP_004140714.2 reticulon-like protein B11 [Cucumis sativus]4.58e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

XP_008456165.1 PREDICTED: reticulon-like protein B11 [Cucumis melo]4.58e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

XP_022941946.1 reticulon-like protein B11 [Cucurbita moschata]1.57e-2788.52Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VAL LWI SFIGSFFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY QMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

XP_022982758.1 reticulon-like protein B11 [Cucurbita maxima]1.57e-2788.52Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VAL LWI SFIGSFFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY QMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

TrEMBL top hitse value%identityAlignment
A0A0A0L980 Reticulon-like protein2.22e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

A0A1S3C273 Reticulon-like protein2.22e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

A0A5A7T2J0 Reticulon-like protein1.41e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

A0A5D3CR52 Reticulon-like protein2.22e-3298.36Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

A0A6J1J5P8 Reticulon-like protein7.58e-2888.52Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        VAL LWI SFIGSFFNFLTLVY GVLLSLSAP+VYDKYQD IDEKLCVTHRY QMQY+KLD
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

SwissProt top hitse value%identityAlignment
Q28D16 Reticulon-31.9e-0638.33Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKL
        +AL +W+++++G+ FN +TL+ +GVLL+ +APIVY+KY+  ID  + + H + +   +K+
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKL

Q5J6M8 Reticulon-3-A4.2e-0638.33Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKL
        +AL +W+++++G+ FN +TL+ +GVLL+ +APIVY+KY+  ID  + + H   +   +K+
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKL

Q6NPD8 Reticulon-like protein B101.1e-1459.02Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        V++ LW VSF+G+F NFLT++Y+GV+LSL  P +Y++YQD IDEKL +THR  Q QY+K+D
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

Q8GYH6 Reticulon-like protein B161.9e-0640.98Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        V + LW++S IGS+ +  TL+YIG +LS++ P +Y KYQ  +D+     HR     YK +D
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

Q9LT71 Reticulon-like protein B116.6e-1262.96Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ
        V+L LW +S++G+  N LTLVYIGVLLSLS PIVY+KYQDHIDEK+  T ++ +
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ

Arabidopsis top hitse value%identityAlignment
AT2G15280.1 Reticulon family protein7.8e-1659.02Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        V++ LW VSF+G+F NFLT++Y+GV+LSL  P +Y++YQD IDEKL +THR  Q QY+K+D
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

AT3G10915.2 Reticulon family protein1.3e-0740.98Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        V + LW++S IGS+ +  TL+YIG +LS++ P +Y KYQ  +D+     HR     YK +D
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

AT3G10915.3 Reticulon family protein1.3e-0740.98Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD
        V + LW++S IGS+ +  TL+YIG +LS++ P +Y KYQ  +D+     HR     YK +D
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLD

AT3G19460.1 Reticulon family protein4.7e-1362.96Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ
        V+L LW +S++G+  N LTLVYIGVLLSLS PIVY+KYQDHIDEK+  T ++ +
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ

AT3G19460.2 Reticulon family protein4.7e-1362.96Show/hide
Query:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ
        V+L LW +S++G+  N LTLVYIGVLLSLS PIVY+KYQDHIDEK+  T ++ +
Subjt:  VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGGGTCCTTCTCAGTCTTTCAGCTCCTATAGTGTATGACAA
ATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAAGAAGCTTGATTGTATCCATATGATCCATATGTTGTAG
mRNA sequenceShow/hide mRNA sequence
GTTGCTCTTGCACTATGGATTGTGTCATTCATTGGCAGTTTCTTCAATTTTCTTACACTGGTTTATATTGGGGTCCTTCTCAGTCTTTCAGCTCCTATAGTGTATGACAA
ATACCAAGATCACATCGATGAAAAGTTGTGTGTAACACATAGATATGCACAGATGCAATACAAGAAGCTTGATTGTATCCATATGATCCATATGTTGTAG
Protein sequenceShow/hide protein sequence
VALALWIVSFIGSFFNFLTLVYIGVLLSLSAPIVYDKYQDHIDEKLCVTHRYAQMQYKKLDCIHMIHML