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CsGy4G013090 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G013090
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionLipoxygenase
Genome locationGy14Chr4:18235988..18236516
RNA-Seq ExpressionCsGy4G013090
SyntenyCsGy4G013090
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041376.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]1.39e-2051.94Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSH----SGALFQPYPNDINLKKQL--MRGKKSKNNGGLRLVSG-GGIIKAALAISAEPTTTVITKVIVKKITG-V
        MLKS G GSS  VA  TL H++ S +      G+   PY N+ +L+K+L  ++ K + NNGGLRL+SG  G IKAALA + E TT+VITKV+VKKITG +
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSH----SGALFQPYPNDINLKKQL--MRGKKSKNNGGLRLVSG-GGIIKAALAISAEPTTTVITKVIVKKITG-V

Query:  TSSSNLTNGSQPPQKLLQLGFASTLLDPN
        TSS+ +       QK+LQLGFAS L DP+
Subjt:  TSSSNLTNGSQPPQKLLQLGFASTLLDPN

NP_001315401.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]3.72e-5286.67Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKS  CGSSTQVA  TLCHLRRSS+ SGALFQPYPNDINLKKQL RGKKSKNNG LRLVSGGGIIKAALA +AEPTTTVITKVIVKKITG T+SSNL  
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
         SQPPQKLLQLGFAS LLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

TYK21641.1 linoleate 13S-lipoxygenase 2-1 [Cucumis melo var. makuwa]2.79e-5185.83Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKS  CGSSTQVA  TLCHLRRSS+ SGALFQPYPNDINLKKQL RGKKSKNN  LRLVSGGGIIKAALA +AEPTTTVITKVIVKKITG T+SSNL  
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
         SQPPQKLLQLGFAS LLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

XP_004142236.1 linoleate 13S-lipoxygenase 2-1, chloroplastic [Cucumis sativus]3.62e-6599.17Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKSLGCGSSTQVASATLCHL RSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
        GSQPPQKLLQLGFASTLLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

XP_038901038.1 linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Benincasa hispida]2.85e-3568.85Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHS--GALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNL
        MLKS G GSST+VA ATLCHL+R   HS  G     Y N+ NL+KQL +G K K NGGLRLVSGGGIIKAALA + EPTTTVITKVIVKKITG  +SS +
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHS--GALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNL

Query:  TNGSQPPQKLLQLGFASTLLDP
           +Q PQKLLQLGFAS LLDP
Subjt:  TNGSQPPQKLLQLGFASTLLDP

TrEMBL top hitse value%identityAlignment
A0A0A0L0L3 Uncharacterized protein6.21e-2153.49Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSH---SGALFQPYPNDINLKKQLMRGKKSKNN---GGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTS
        MLKS G GSS  VA  +L H R S +     G+   PY N+ +L+K+L RG K KNN   GGLR +SG GIIKAALA + E TT+VIT V VKKITG  +
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSH---SGALFQPYPNDINLKKQLMRGKKSKNN---GGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTS

Query:  SSNLTNGSQ--PPQKLLQLGFASTLLDPN
        SS +   +Q   P K LQLGFAS L DP+
Subjt:  SSNLTNGSQ--PPQKLLQLGFASTLLDPN

A0A0A0L1W1 Uncharacterized protein1.91e-6999.17Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKSLGCGSSTQVASATLCHL RSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
        GSQPPQKLLQLGFASTLLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

A0A125S6K8 Lipoxygenase1.80e-5286.67Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKS  CGSSTQVA  TLCHLRRSS+ SGALFQPYPNDINLKKQL RGKKSKNNG LRLVSGGGIIKAALA +AEPTTTVITKVIVKKITG T+SSNL  
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
         SQPPQKLLQLGFAS LLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

A0A1S3BMS1 Lipoxygenase1.80e-5286.67Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKS  CGSSTQVA  TLCHLRRSS+ SGALFQPYPNDINLKKQL RGKKSKNNG LRLVSGGGIIKAALA +AEPTTTVITKVIVKKITG T+SSNL  
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
         SQPPQKLLQLGFAS LLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

A0A5D3DD89 Lipoxygenase1.35e-5185.83Show/hide
Query:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN
        MLKS  CGSSTQVA  TLCHLRRSS+ SGALFQPYPNDINLKKQL RGKKSKNN  LRLVSGGGIIKAALA +AEPTTTVITKVIVKKITG T+SSNL  
Subjt:  MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTN

Query:  GSQPPQKLLQLGFASTLLDP
         SQPPQKLLQLGFAS LLDP
Subjt:  GSQPPQKLLQLGFASTLLDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAATCTCTAGGCTGTGGGTCTTCGACTCAGGTCGCTTCGGCGACTCTCTGCCATTTGCGGAGGTCGTCGAGTCACAGCGGTGCTTTGTTTCAGCCATATCCAAA
TGATATTAACCTGAAGAAGCAGCTGATGAGGGGGAAAAAGAGTAAGAATAATGGAGGGTTGAGATTGGTGTCCGGAGGTGGGATAATCAAAGCAGCCTTAGCCATATCCG
CGGAACCCACCACCACGGTCATCACAAAAGTGATTGTGAAGAAGATCACCGGAGTAACCTCCTCGTCCAACCTTACGAATGGAAGCCAACCCCCTCAAAAGTTGCTACAG
CTTGGGTTCGCTAGCACTTTACTTGATCCCAATCCAAGCTATCGTTTCAGTGAGAATCATAAAGACAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAATCTCTAGGCTGTGGGTCTTCGACTCAGGTCGCTTCGGCGACTCTCTGCCATTTGCGGAGGTCGTCGAGTCACAGCGGTGCTTTGTTTCAGCCATATCCAAA
TGATATTAACCTGAAGAAGCAGCTGATGAGGGGGAAAAAGAGTAAGAATAATGGAGGGTTGAGATTGGTGTCCGGAGGTGGGATAATCAAAGCAGCCTTAGCCATATCCG
CGGAACCCACCACCACGGTCATCACAAAAGTGATTGTGAAGAAGATCACCGGAGTAACCTCCTCGTCCAACCTTACGAATGGAAGCCAACCCCCTCAAAAGTTGCTACAG
CTTGGGTTCGCTAGCACTTTACTTGATCCCAATCCAAGCTATCGTTTCAGTGAGAATCATAAAGACAAATAA
Protein sequenceShow/hide protein sequence
MLKSLGCGSSTQVASATLCHLRRSSSHSGALFQPYPNDINLKKQLMRGKKSKNNGGLRLVSGGGIIKAALAISAEPTTTVITKVIVKKITGVTSSSNLTNGSQPPQKLLQ
LGFASTLLDPNPSYRFSENHKDK