CuGenDBv2

Gene ID	CsGy4G013300
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Histone H3
Genome location	Gy14Chr4:18371133..18371807
RNA-Seq Expression	CsGy4G013300
Synteny	CsGy4G013300
Gene Ontology terms	GO:0000786 - nucleosome (cellular component) GO:0005634 - nucleus (cellular component) GO:0010369 - chromocenter (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CDP18134.1 unnamed protein product [Coffea canephora]

3.29e-85

99.26

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVT+MPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

KAB1768587.1 histone H3, partial [Klebsiella pneumoniae]

3.35e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

NP_001131276.1 histone H3.2 [Zea mays]

2.32e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

PIA53463.1 hypothetical protein AQUCO_00900211v1, partial [Aquilegia coerulea]

2.74e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

XP_017621393.1 PREDICTED: histone H3.2-like [Gossypium arboreum]

3.29e-85

99.26

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

TrEMBL top hits

e value

%identity

Alignment

A0A059AF37 Histone H3

1.12e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

A0A1U7XR83 Histone H3

1.12e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

C5XPA5 Histone H3

1.12e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

K4AY75 Histone H3

1.12e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

M5WKJ0 Histone H3

1.12e-85

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

SwissProt top hits

e value

%identity

Alignment

P59226 Histone H3.2

8.3e-67

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

P69246 Histone H3.2

8.3e-67

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q6LBE3 Histone H3.2

8.3e-67

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q6LCK1 Histone H3.2

8.3e-67

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Q71T45 Histone H3.2

8.3e-67

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Arabidopsis top hits

e value

%identity

Alignment

AT1G09200.1 Histone superfamily protein

5.9e-68

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT3G27360.1 Histone superfamily protein

5.9e-68

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10390.1 Histone superfamily protein

5.9e-68

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G10400.1 Histone superfamily protein

5.9e-68

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

AT5G65360.1 Histone superfamily protein

5.9e-68

100

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Query:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
        MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY
Subjt:  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAY

Query:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
        LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Subjt:  LVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCACGAACTAAGCAAACCGCCAGGAAATCAACCGGAGGAAAGGCTCCGAGGAAGCAATTGGCCACCAAGGCCGCCAGGAAATCAGCTCCGGCGACCGGTGGAGTCAA
GAAGCCCCATAGGTTCAGGCCAGGGACTGTGGCATTGAGAGAGATCCGAAAGTACCAGAAGAGTACAGAGCTTCTTATCAGGAAACTTCCATTCCAGAGATTGGTAAGAG
AAATTGCTCAAGATTTCAAGACTGACCTTCGTTTTCAGAGCAGCGCTGTTGCGGCTCTTCAAGAGGCGGCTGAGGCTTATCTCGTTGGGCTCTTTGAAGATACCAATCTT
TGTGCCATTCATGCCAAGAGGGTTACTATTATGCCTAAGGATATCCAGCTCGCTAGAAGAATCAGGGGTGAGAGGGCTTAG

mRNA sequence

Show/hide mRNA sequence

CTCTATATAACAATCCCCCAAACCGATTTCATCATCATCGTTTTCGAGTTTCTCAAGAATAACCCAAATCAAATTCCCTCTTCCCACTAAAATCCTTGTTATCTTCGTCT
TTAATGGCACGAACTAAGCAAACCGCCAGGAAATCAACCGGAGGAAAGGCTCCGAGGAAGCAATTGGCCACCAAGGCCGCCAGGAAATCAGCTCCGGCGACCGGTGGAGT
CAAGAAGCCCCATAGGTTCAGGCCAGGGACTGTGGCATTGAGAGAGATCCGAAAGTACCAGAAGAGTACAGAGCTTCTTATCAGGAAACTTCCATTCCAGAGATTGGTAA
GAGAAATTGCTCAAGATTTCAAGACTGACCTTCGTTTTCAGAGCAGCGCTGTTGCGGCTCTTCAAGAGGCGGCTGAGGCTTATCTCGTTGGGCTCTTTGAAGATACCAAT
CTTTGTGCCATTCATGCCAAGAGGGTTACTATTATGCCTAAGGATATCCAGCTCGCTAGAAGAATCAGGGGTGAGAGGGCTTAGATTTAGAGGTTGTGATGGTATTTGCA
TCTAGTTTTAGTGTTTTATATATTACTGCACGATTCTAGTTTAAGATCGTGTTATTGATCTTGTTTGCTACCTGTTTGATGAAATCAACTCTGTAAAATTCCTTAAGTTT
AATGGTTAATTGACG

Protein sequence

Show/hide protein sequence

MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNL
CAIHAKRVTIMPKDIQLARRIRGERA

CsGy4G013300 (gene) of Cucumber (Gy14) v2.1 genome