CuGenDBv2

Gene ID	CsGy4G013580
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Mediator of RNA polymerase II transcription subunit 4
Genome location	Gy14Chr4:18608847..18611475
RNA-Seq Expression	CsGy4G013580
Synteny	CsGy4G013580
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR019258 - Mediator complex, subunit Med4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004142109.1 mediator of RNA polymerase II transcription subunit 4 [Cucumis sativus]

4.48e-280

100

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA

Query:  AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS
        AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS
Subjt:  AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS

Query:  EDDD
        EDDD
Subjt:  EDDD

XP_008449288.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo]

1.47e-272

97.79

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KTEG A
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVR DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-

Query:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

XP_022143910.1 mediator of RNA polymerase II transcription subunit 4 [Momordica charantia]

7.20e-255

92.4

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQI QSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ NLSS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
         SQTQSSPST LD+TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADY+RP+R KT+ D 
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
        EN+SLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPKAVESTEKTIEPMIEPPAPV  DANPLA
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA

Query:  ---AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
           AIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RVDEPQ LRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSD
Subjt:  ---AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

XP_023518528.1 mediator of RNA polymerase II transcription subunit 4 [Cucurbita pepo subsp. pepo]

3.00e-249

90.91

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEV PNR+LWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
         SQTQS+PST LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLK+AEQVLDVLFDDYADYQ  +R KT  D 
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCS-TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL
        ENESLCS TTVASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY+FA+LDVGLPK+VESTEKTIEPMIEPPAPV  DANPL
Subjt:  ENESLCS-TTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL

Query:  A--AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        A   IQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RVDEPQLR NALPGLH+P EPIQVRHVQLDILDQDDDSSDY S+E
Subjt:  A--AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

XP_038882754.1 mediator of RNA polymerase II transcription subunit 4 [Benincasa hispida]

1.18e-262

94.59

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ N+SS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPST LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR K + DA
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-
        ENESLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLD+GLPKAVESTEKTIEPMIEPPAPV  DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-

Query:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          A+IQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPPMDSLPVTRVDEPQLRPNA PGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXB7 Mediator of RNA polymerase II transcription subunit 4

2.17e-280

100

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA

Query:  AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS
        AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS
Subjt:  AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSS

Query:  EDDD
        EDDD
Subjt:  EDDD

A0A1S3BLP6 Mediator of RNA polymerase II transcription subunit 4

7.12e-273

97.79

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KTEG A
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVR DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-

Query:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

A0A5A7TZC1 Mediator of RNA polymerase II transcription subunit 4

7.12e-273

97.79

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
        TSQTQSSPST LDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADYQRPRR KTEG A
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-
        ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVR DANPL 
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL-

Query:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
          AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
Subjt:  --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

A0A6J1CQ51 Mediator of RNA polymerase II transcription subunit 4

3.49e-255

92.4

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQI QSPARLGL NPNSPSIQNPTPPKLPPSQQSHHQNQ NLSS TPSSTLLPLLPPLPRAQALLLQMA+LASKLFEVSPNRSLWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
         SQTQSSPST LD+TPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDVLFDDYADY+RP+R KT+ D 
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA
        EN+SLCSTTVASQL+LSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLYNFA+LDVGLPKAVESTEKTIEPMIEPPAPV  DANPLA
Subjt:  ENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLA

Query:  ---AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD
           AIQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RVDEPQ LRPNALPGLHKPPEPIQVR VQLDILDQDDDSSDYTSD
Subjt:  ---AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSD

Query:  EGSSEDDD
        EGSSEDDD
Subjt:  EGSSEDDD

A0A6J1HH73 Mediator of RNA polymerase II transcription subunit 4

1.97e-247

90.42

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Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL
        MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQN SNLSS TPSSTLLPLLPPLPRAQALLLQMASLASKLFEV PNR+LWLTAFRGSLPTFL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFL

Query:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA
         SQTQS+PST LDSTPS+SKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYE+RAKDAALRAFANKLK+AEQVLDVLFDDYADYQ  +R KT  D 
Subjt:  TSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDA

Query:  ENESLCSTT-VASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL
        ENESLCSTT VASQL+LSDILSYAH+ISYTTFAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FA+LDVGLPK+VESTEKTIEPMIE PAPV  DANPL
Subjt:  ENESLCSTT-VASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL

Query:  A--AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE
        A   IQGLLPPNITVPSGWKPGMPVELP DLPMPPPGWKPGDPV LPP+DSLPV RVDEPQLR NALPGLH+P EPIQVRHVQLDILDQDDDSSDY S+E
Subjt:  A--AIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDE

Query:  GSSEDDD
        GSSEDDD
Subjt:  GSSEDDD

SwissProt top hits

e value

%identity

Alignment

Q9LZ00 Mediator of RNA polymerase II transcription subunit 4

1.5e-140

65.89

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSSTPSSTLLPLLPPLPRAQALLLQMASLASKL
        MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS H   Q Q NL              S++  SS LL LLPPLPRAQALL QMA L SKL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSSTPSSTLLPLLPPLPRAQALLLQMASLASKL

Query:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL
        F+VSPNR++WL+AFRGSLP+FL+S +   P  L + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLK+AE+VL
Subjt:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL

Query:  DVLFDDYADYQRPRRDKTEGDAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA
        D+L DDY+DY++P+R K E D E+     S  STTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Subjt:  DVLFDDYADYQRPRRDKTEGDAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA

Query:  VESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEP
        VE+ EK +E +IEPP P  P+A  ++AI  LLPPNI VPSGWKPGMPVELP DLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+PP+ 
Subjt:  VESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEP

Query:  IQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  IQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Arabidopsis top hits

e value

%identity

Alignment

AT5G02850.1 hydroxyproline-rich glycoprotein family protein

1.1e-141

65.89

Show/hide

Query:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSSTPSSTLLPLLPPLPRAQALLLQMASLASKL
        MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS H   Q Q NL              S++  SS LL LLPPLPRAQALL QMA L SKL
Subjt:  MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHH---QNQSNL--------------SSSTPSSTLLPLLPPLPRAQALLLQMASLASKL

Query:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL
        F+VSPNR++WL+AFRGSLP+FL+S +   P  L + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI++KD++L AFANKLK+AE+VL
Subjt:  FEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVL

Query:  DVLFDDYADYQRPRRDKTEGDAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA
        D+L DDY+DY++P+R K E D E+     S  STTV+SQL+L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Subjt:  DVLFDDYADYQRPRRDKTEGDAEN----ESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA

Query:  VESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEP
        VE+ EK +E +IEPP P  P+A  ++AI  LLPPNI VPSGWKPGMPVELP DLP+PPPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+PP+ 
Subjt:  VESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEP

Query:  IQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
        IQVR VQLDIL +DDDSSDY+SD+ SS+D+D
Subjt:  IQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCTTCAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCTCCTAAATTGCCTCCTTCTCAACAATC
TCATCACCAAAATCAATCCAATCTCTCTTCTTCCACCCCTTCCTCCACCCTCCTTCCCCTACTTCCTCCTCTTCCTAGAGCTCAAGCACTTCTCCTTCAAATGGCTTCAT
TAGCTTCCAAGCTCTTTGAAGTTTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCCACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACC
CTTCTTGATTCTACTCCCTCTTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTTCTTCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCA
AGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGAAGCTGAGCAGGTACTTGATGTTTTGTTTGATG
ATTATGCGGATTACCAGCGTCCTCGACGGGATAAGACAGAGGGTGATGCTGAAAATGAATCTTTGTGTTCGACTACAGTTGCATCCCAGTTGAGATTATCTGATATATTG
TCGTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCG
TGCGTCTCAGTTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACTGAGAAAACTATTGAGCCAATGATTGAGCCTCCAGCTCCGGTGCGAC
CAGATGCTAATCCTCTGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTTCCATCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTGGAGACTTACCAATG
CCCCCTCCTGGATGGAAGCCTGGGGATCCTGTGCGATTACCACCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATT
GCATAAACCTCCTGAACCAATTCAAGTTAGGCATGTTCAATTGGATATTCTTGACCAAGATGATGATAGTAGTGATTACACTAGTGATGAAGGAAGCTCTGAAGATGATG
ATTGA

mRNA sequence

Show/hide mRNA sequence

TTTTCTTTTCGGGCTGAAAATCCACTGTGAGATGAGAGAGGACGAACAACGCGCGGCTGTGTGAGGTGGACGCCGAATCTGCGAGAGAACATTTGGGTCTCCGTTCAGCG
GCAGTGCGCCGGTGGTGTGGCTACGGTTCAGTGGCTAAATCGATGTCGGTAACTGTTTTTCTTTGAGATTTTTCAGCGTGTATTTGATTGAAGCTTGAATATGTCAAGGA
TTGAGGTTTAATCGATTTCTTCGTGAGAAGGTTTATAATTGATTGGGGGGGTTTTTGATTCTGTATAACTCTGTATGATTACACTAGATATCTTGGTGTTCTTATTCTCT
AGATTGAATTTTGTTTTGGGCATATTAGAGTTTAGTTGTTTACTCTCTTTTTGTGTATGAACCCTAATAGAATTCATTGAAGTACACAAAAAATATGCTTCAGCATCAAA
TTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCTCCTAAATTGCCTCCTTCTCAACAATCTCATCACCAAAATCAA
TCCAATCTCTCTTCTTCCACCCCTTCCTCCACCCTCCTTCCCCTACTTCCTCCTCTTCCTAGAGCTCAAGCACTTCTCCTTCAAATGGCTTCATTAGCTTCCAAGCTCTT
TGAAGTTTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCCACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACCCTTCTTGATTCTACTC
CCTCTTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTTCTTCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAGAAG
ATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGAAGCTGAGCAGGTACTTGATGTTTTGTTTGATGATTATGCGGATTACCA
GCGTCCTCGACGGGATAAGACAGAGGGTGATGCTGAAAATGAATCTTTGTGTTCGACTACAGTTGCATCCCAGTTGAGATTATCTGATATATTGTCGTATGCTCATAGGA
TAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCGTGCGTCTCAGTTGTAT
AATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACTGAGAAAACTATTGAGCCAATGATTGAGCCTCCAGCTCCGGTGCGACCAGATGCTAATCCTCT
GGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTTCCATCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTGGAGACTTACCAATGCCCCCTCCTGGATGGA
AGCCTGGGGATCCTGTGCGATTACCACCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATTGCATAAACCTCCTGAA
CCAATTCAAGTTAGGCATGTTCAATTGGATATTCTTGACCAAGATGATGATAGTAGTGATTACACTAGTGATGAAGGAAGCTCTGAAGATGATGATTGACTGGAACTTGG
ACAGAATCGTCAACTAATGTCATAAGTGTTCCCTTGTTGACAAAAGAGGTGGGTATAGAGACAATCAAAAGGTTTGCCTAGAAGCAGCAACTCTTAAAGAGTGTATAATA
TAGTTTACTGACGACTCTATATGCATGGAGCTAAGCAGCAATCTGTAGGGGGAAGGTTACATTTCATACTTTCAAACTTACATGTTATCGATGATGTGTTTTGCATTCCC
AAGGTGAACTTGAAACACACAGATCTTTTCAATTTTTAATTTGAAAAGCTATAACGCTCCTGACTTCGTGTAAAAACACTCCTGACTTGATTCCTTTACTTGTGTTTTCT
TGGTTTTTAAATTTTGAATATGAGATTTAATCGAACTCTCTTAGGGTACCGGATGTGTTCTAAACCTTAGTAAACACTGATCTATCTTTTATACCATGTCGTAGAGTGCA
GTATATAAGCTTCTAGGAGTTGTTGAATCAATTATTGATTCGGTATGATCGTTTGAAGGAAACTGATTAGATTATTTTATGTTGGTGGCATTCAGAGTTGAATATGAGAT
TCTTTATGTTATGGCTTATACTTGTGAAAGAACAAAAATTCTGAAATGAAGATTATTGTTGTTGAAGCTTTTTCTCCTGACTTGAAGAATATGAAGATGTAGGATATTTC
TTTAAAAAAAGATATTGTTATTTTGTATTACATCCTTGGGTGTTTTAGAAGAGGCTTCAGATTCTGAAGTTTTGAAGCAGCTGGAAGGTGGGCATTTGTGAATCCTAAAC
TATTATGAGCTTCAATTATCGAATGTGAGAAATTATTATTTTTGTAGATGGTTGAAGAACATTTTGTGGTTTTTTTAGACTCCCTTTTGAGTACTGTATATTTTGTAGGC
ATAATTATTATTTCTTTTCCATAAATTGCACTAGTGCTTATGGGATTTTGGTAAATAATGGCCATAAGCTTGTGTTTTGTATGGTTGGTTTTTTAATAA

Protein sequence

Show/hide protein sequence

MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPST
LLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDVLFDDYADYQRPRRDKTEGDAENESLCSTTVASQLRLSDIL
SYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPLAAIQGLLPPNITVPSGWKPGMPVELPGDLPM
PPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD

CsGy4G013580 (gene) of Cucumber (Gy14) v2.1 genome