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CsGy4G014600 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G014600
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationGy14Chr4:19418450..19419887
RNA-Seq ExpressionCsGy4G014600
SyntenyCsGy4G014600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2013589.1 hypothetical protein ES319_D09G166000v1 [Gossypium barbadense]2.13e-1243.37Show/hide
Query:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        F GF+L F   +   +  + +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

KAB2066470.1 hypothetical protein ES319_A09G162200v1 [Gossypium barbadense]1.50e-1244.58Show/hide
Query:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

KAE8649554.1 hypothetical protein Csa_018195 [Cucumis sativus]3.84e-4596Show/hide
Query:  MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTE
        MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGK   E
Subjt:  MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTE

KAG6595355.1 hypothetical protein SDJN03_11908, partial [Cucurbita argyrosperma subsp. sororia]8.82e-2258.43Show/hide
Query:  NFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCD-EIGGKCSTEFTT-SCSNLHCSPWKQY
         +K   +G +L    F NGV VVEGSSR   + P+ KL KG    YDS + AT+GIECKCCD EIGGKCST F   SCSNL CSPWK Y
Subjt:  NFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCD-EIGGKCSTEFTT-SCSNLHCSPWKQY

TYJ19036.1 hypothetical protein E1A91_A09G163400v1 [Gossypium mustelinum]1.06e-1244.05Show/hide
Query:  LFLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        +F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  LFLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

TrEMBL top hitse value%identityAlignment
A0A0A0KXD1 Uncharacterized protein8.88e-64100Show/hide
Query:  MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWKQY
        MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWKQY
Subjt:  MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWKQY

A0A2P5W5Y8 Uncharacterized protein7.27e-1344.58Show/hide
Query:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

A0A5D2FAA9 Uncharacterized protein7.27e-1344.58Show/hide
Query:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

A0A5D2P3S3 Uncharacterized protein7.27e-1344.58Show/hide
Query:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  FLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

A0A5D2XZ15 Uncharacterized protein5.13e-1344.05Show/hide
Query:  LFLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK
        +F GF+L F   +   +  I +  ++RPFSI P    Q+ +     S+IFAT+G+ CKCCD  GG+CST +T  CS L C PWK
Subjt:  LFLGFLLTF---VPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTGTGAATTTCAAGTGTTTGTTTCTGGGTTTTCTTCTAACCTTTGTTCCTTTTAGAAATGGAGTTATTGTAGTGGAAGGTAGCAGTAGGCCCTTTTCAATTTC
CCCAATACTCAAGCTTCAAAAAGGTTTTAAGGGATATTATGATTCACAAATTTTTGCAACAATGGGAATTGAATGCAAGTGTTGTGATGAGATTGGAGGTAAATGCTCTA
CTGAGTTTACTACTTCTTGCTCTAATCTCCATTGTTCTCCTTGGAAACAATATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAGGAAACTTCCTTCACATTTCCAACCAACCCTCAATGAAAAGACATTGCAATTTTTAAAAACAAGAAAACGTGTTGTATATTCCCACTTCCTTCCCTCTTTTACAAT
AATAACAACACACCACATTATATTCATCTACCTCATTCTTCCTTTTAAGTTTCCTTCTTACTTACTTAAGTTTAAAGCTATTTCCTTTTTTTAGGTCTTATTCAGATGGG
TTTTGTGAATTTCAAGTGTTTGTTTCTGGGTTTTCTTCTAACCTTTGTTCCTTTTAGAAATGGAGTTATTGTAGTGGAAGGTAGCAGTAGGCCCTTTTCAATTTCCCCAA
TACTCAAGCTTCAAAAAGGTTTTAAGGGATATTATGATTCACAAATTTTTGCAACAATGGGAATTGAATGCAAGTGTTGTGATGAGATTGGAGGTAAATGCTCTACTGAG
TTTACTACTTCTTGCTCTAATCTCCATTGTTCTCCTTGGAAACAATATTAATATTAAATCCAATAATCCCTCAGTTCTTTCCTTTAGTTATAGCAAACATCATTATTTTG
AATACAAGAGTACTTTAACTTTGGTCATGACTTTGGATACTATTTGGGTGTAGCTCATTCAATCTCTCAACATAAAAAGCTCAATAATGTTTTTAATTAACAAGAAAAAG
AAGAAGAAGAAAAGTTTGTTGTCATGTTACAAATTATTATAGTTGGACAACACTAAACTGAACTATTAAATATAGGTGCACAGTTCATGATATTTGTAAGTATTTTCTTG
GTATTGTATATCGTTATGTATATTATTTTTGTTAACTTTAACCAATTATACAAATGAGTTAACTTTGGTTAGGCATATATATAACATCAAGACATATAGATAGAAGTTCA
AAATTTCAATTTTTTTTTTTTTTAAGTCAAGAGGGTATATTTAATTTACTTCAACTGTATAAAGCATATATGGACAATTATAGTATTTGAATGCCTTGAAATTAGATATG
TAACACTTTAAAGGATCGACTATGGGTTCTAGGAGAAGCTCCTCAAACTGTATAGTTGTGTTTATGTTTATGTTATTTGCTCTATTTACTATTTTGATTCGAAAGTTTAA
CAAAAATTAAAGGAAAAGATAAAAAAAAAAAGATAGATTTTGAAGAATGAAAAAATAGGTGTGTTTTTTCAATGTACAAGTTCATGATTTGTTTTCCTATTTTTAATGAA
TGCCCTACATTTGGAATGAGGTGGTAGAATGAAAGGTGTTGATGTTGATCAATTGATGCAAAACTAGAATAAATGTAATTTTGTTATACTAATCACTGTTAAGAACAAAA
AATATATATATAT
Protein sequenceShow/hide protein sequence
MGFVNFKCLFLGFLLTFVPFRNGVIVVEGSSRPFSISPILKLQKGFKGYYDSQIFATMGIECKCCDEIGGKCSTEFTTSCSNLHCSPWKQY