; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G014830 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G014830
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationGy14Chr4:19549593..19557728
RNA-Seq ExpressionCsGy4G014830
SyntenyCsGy4G014830
Gene Ontology termsGO:0006614 - SRP-dependent cotranslational protein targeting to membrane (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]2.02e-90100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

XP_004147628.1 signal recognition particle 19 kDa protein [Cucumis sativus]5.10e-8696.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]1.20e-91100Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]1.25e-8696.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]1.07e-8797.78Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein2.38e-8596.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein6.06e-8796.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein1.04e-8595.59Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSK-GKGGRKKK
        AELVPRHPGRTKKQEPASSS TAGPSK GKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSK-GKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein4.98e-8695.56Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYP+YINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein3.51e-8696.3Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        AELVPRHPGR KKQEPASSS TAGPSKGKGGRKKK
Subjt:  AELVPRHPGRTKKQEPASSSSTAGPSKGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein5.6e-2348.46Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        +   RT+K   A  S   G    KG  KKK
Subjt:  RHPGRTKKQEPASSSSTAGPSKGKGGRKKK

P49964 Signal recognition particle 19 kDa protein2.7e-4972.87Show/hide
Query:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTCVEI DCC HLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVP+
Subjt:  NIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPR

Query:  HPGRTKKQEPASSSSTAGPSKGKGGRKKK
        H GRTKKQEPA +SSTAG SKGKGG+KKK
Subjt:  HPGRTKKQEPASSSSTAGPSKGKGGRKKK

Q5RBR1 Signal recognition particle 19 kDa protein5.6e-2348.46Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASSSSTAGPSKGKGGRKKK
        +   RT+K   A  S   G    KG  KKK
Subjt:  RHPGRTKKQEPASSSSTAGPSKGKGGRKKK

Q943Z6 Signal recognition particle 19 kDa protein6.3e-5169.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKGGRKKK
        AELVPRHP R         KKQEP +++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKGGRKKK

Q9D7A6 Signal recognition particle 19 kDa protein9.5e-2348.09Show/hide
Query:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R++ +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C  + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML +AE++P
Subjt:  RWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  RHPGRTKKQEPASS--SSTAGPSKGKGGRKK
        +   RT+K   A        G  KGKG +KK
Subjt:  RHPGRTKKQEPASS--SSTAGPSKGKGGRKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative4.5e-5269.66Show/hide
Query:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+WVV+YP+YINSKKT+AEGRRI VSK+CENP C+EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKGGRKKK
        AELVPRHP R         KKQEP +++ST+G S   GKGG+KK+
Subjt:  AELVPRHPGR--------TKKQEPASSSSTAGPS--KGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATTCCCAACATAAAGAGATGGGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACGATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCATG
CGAGAATCCTACGTGTGTTGAGATCGGGGATTGCTGCGGTCATCTCAAACTGCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGGAGAG
TGCGGGTTCTGCTGAAGAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGG
ACAAAGAAGCAGGAGCCTGCATCATCATCATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGGAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
CTCGGACCGGCCAAATTTATTACTTTCAGGTTCACGGTTCAACCCCACCTTCATCTTACTCTTCCAAGTCTTCCATCTCCGTCGTCTCGTCTGTCCGACATCCGGTTTCA
GTCTCTCTGATCGTCACGGTTTCAGCTGTTCTTCATTCTGTGAGGTATCTTTCATGTGCTATCGTAGGAATTTGGTTGGAACATGGATGGAGAAATTCCCAACATAAAGA
GATGGGTAGTACTGTATCCCATCTATATTAATTCAAAGAAGACGATTGCTGAAGGAAGACGTATAGGTGTTAGCAAAGCATGCGAGAATCCTACGTGTGTTGAGATCGGG
GATTGCTGCGGTCATCTCAAACTGCCTTTTGCTATTGAGATTGATAAAGCTTATCCTCGTGATTTCATGCAAAGAGGGAGAGTGCGGGTTCTGCTGAAGAAGGAGGATGG
AACTCTGTCTAATCCAGCTATTACTTCCAGAAAACAACTGATGCTTCGTATAGCCGAACTTGTTCCTAGACATCCTGGAAGGACAAAGAAGCAGGAGCCTGCATCATCAT
CATCAACTGCAGGACCTTCAAAAGGCAAGGGTGGAAGGAAGAAGAAATAGTTATAATACATAATTACAAGAAACAGATTGTTATTGACCAGGCCTCATATCTTAATTCTT
AATGACACTTGAGTATCGGTGTTCTGCTCCGCCCCCAACGAAACTAGACAATCGGTTTGTTTTGAACAATTTTGTAAAATAGTGGATCCTGGAGTTTTTTTTTTACCGAG
ATAGGAGAAAAGTGGATGAGAATTAGGTTTGAATTATTCGATCTTTTGCTTAAATCCTTACAGTTGAAATAACCTATCTGTGAGCATGGTTTACATGTTTGGAGATTGAA
AAATGTGGAAATTTCTCAATACTTTGTTGTCATAGTCAGAATCTGGAAATATGAAAATTTTGAGACTTGATTATAATCTTAGTAACAAACAGACTTGAAACTCTCCATAA
GCTGAACTTTGGAAATCGTAGGTTTGGAAAAGGGCAAGTTTTTCACTATCAGATTGTTCTACATTGGGTTGTGTTCCTGGTGCACAAATGCATTCTTTTCTCAAATTGAA
TTTATAGCGGGTTATTTTACTCTCAAG
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWVVLYPIYINSKKTIAEGRRIGVSKACENPTCVEIGDCCGHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPRHPGR
TKKQEPASSSSTAGPSKGKGGRKKK