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CsGy4G016690 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G016690
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionConserved oligomeric Golgi complex subunit 6
Genome locationGy14Chr4:21717693..21727729
RNA-Seq ExpressionCsGy4G016690
SyntenyCsGy4G016690
Gene Ontology termsGO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsIPR010490 - Conserved oligomeric Golgi complex subunit 6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608028.1 Conserved oligomeric Golgi complex subunit 6, partial [Cucurbita argyrosperma subsp. sororia]5.92e-3482.02Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA E  KSKG+G ISRRGR  + S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLINCL AIQQP+SGHEVAAEYVKKL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
XP_004142643.1 conserved oligomeric Golgi complex subunit 6 [Cucumis sativus]3.82e-3685.39Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQSSPA A+Q+ ETPSKIFLINCLCAIQQPLS HEVAAEYV KL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
XP_008444218.2 PREDICTED: conserved oligomeric Golgi complex subunit 6 [Cucumis melo]1.58e-3787.64Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVAAEYVKKL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
XP_022135456.1 conserved oligomeric Golgi complex subunit 6 [Momordica charantia]1.72e-3484.09Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMI
        QMCEQA E  KSKG+G ISRRGRT S S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVA+EYVKKL  MI
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMI
XP_038899282.1 conserved oligomeric Golgi complex subunit 6 [Benincasa hispida]3.40e-3989.89Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGSG ISRRGRT SGSGQNSKSSVDALLSQSSPA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVAAEYVKKL V+IN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
TrEMBL top hitse value%identityAlignment
A0A0A0KY46 Conserved oligomeric Golgi complex subunit 62.32e-51100Show/hide
Query:  MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
Subjt:  MCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
A0A0A0L1U3 Conserved oligomeric Golgi complex subunit 61.85e-3685.39Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQSSPA A+Q+ ETPSKIFLINCLCAIQQPLS HEVAAEYV KL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
A0A1S3BAN8 Conserved oligomeric Golgi complex subunit 67.65e-3887.64Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVAAEYVKKL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
A0A5A7UEV6 Conserved oligomeric Golgi complex subunit 67.65e-3887.64Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
        QMCEQA EI KSKGS  ISRRGRT SGS QNSKSSVDALLSQS PA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVAAEYVKKL VMIN
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMIN
A0A6J1C0T5 Conserved oligomeric Golgi complex subunit 68.34e-3584.09Show/hide
Query:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMI
        QMCEQA E  KSKG+G ISRRGRT S S QNSKSSVDALLSQSSPA ASQ+ ETPSKIFLINCLCAIQQPLSGHEVA+EYVKKL  MI
Subjt:  QMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAEYVKKLEVMI
SwissProt top hitse value%identityAlignment
Q6NMI3 Conserved oligomeric Golgi complex subunit 63.7e-1855.05Show/hide
Query:  AHGEGSFHKPIVKLVSVSSNSQMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAE
        A GE     P++  + +    +MCEQA E  KSK SG + RR RT+S S Q   +SVDALLS SSP+   QN ETPSKIFLINCLCAIQQPL  H+VA++
Subjt:  AHGEGSFHKPIVKLVSVSSNSQMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAE

Query:  YVKKLEVMI
        YV  + +MI
Subjt:  YVKKLEVMI
Arabidopsis top hitse value%identityAlignment
AT1G31780.1 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex COG6 (InterPro:IPR010490); Has 384 Blast hits to 379 proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa - 151; Fungi - 156; Plants - 42; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).2.7e-1955.05Show/hide
Query:  AHGEGSFHKPIVKLVSVSSNSQMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAE
        A GE     P++  + +    +MCEQA E  KSK SG + RR RT+S S Q   +SVDALLS SSP+   QN ETPSKIFLINCLCAIQQPL  H+VA++
Subjt:  AHGEGSFHKPIVKLVSVSSNSQMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVAAE

Query:  YVKKLEVMI
        YV  + +MI
Subjt:  YVKKLEVMI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCATTCCGATGGCCGGACTTTTCATTTTCAAGCACATGGCGAAGGTTCTTTTCACAAGCCAATCGTTAAACTCGTATCGGTGTCTTCCAACTCTCAGATGTGTGA
GCAAGCAACAGAAATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGT
CCCAAAGCAGCCCTGCTCTAGCCTCTCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCA
GCTGAATATGTCAAGAAACTTGAAGTAATGATAAATTAG
mRNA sequenceShow/hide mRNA sequence
TGCCCAAAATTTTATTTTCAAGCTGTCCTGTAATCGCCCTCTTTTTTCGTACTTAACTTGACGATCGACCCCAGTCTTCGCCGGGCTCTGGTTGACATATGCCTCATTCC
GATGGCCGGACTTTTCATTTTCAAGCACATGGCGAAGGTTCTTTTCACAAGCCAATCGTTAAACTCGTATCGGTGTCTTCCAACTCTCAGATGTGTGAGCAAGCAACAGA
AATTCGCAAGTCTAAGGGATCTGGCCTCATATCAAGAAGGGGTAGGACGACTTCTGGTTCCGGTCAGAATAGCAAATCATCAGTAGATGCACTATTGTCCCAAAGCAGCC
CTGCTCTAGCCTCTCAGAACATTGAAACACCTTCAAAGATCTTTCTGATCAACTGTCTATGTGCCATCCAACAGCCATTATCTGGCCACGAGGTTGCAGCTGAATATGTC
AAGAAACTTGAAGTAATGATAAATTAGTCACATGAGTGTGCTTGTTGAAAAGGAAGTTGGGAGGTGCGGCTTATCTCAAAAGATGACGTATTTCCATAAAATCTCACAAA
CAGGCAATGCAACGGGATGGACCGAGATTCAAGACACGTCTCTCCCGCTTCACTTTCAGAGAGCTTGAAAGCTTTCTTTGGGCATGTTTTGGGAAGTGAGAGTTTCCTTC
CTAAGTTTGAGCTATTACAGGTTCCTAAACTGCGAACGGAAGCCTGTGTTCAAGTGGCTCGATCACTCTCTGAAGCGTACAAACTTATATACGACACAATCATGGATCCA
AACAACAGGTACCCAGACCCCACTGCGTGCAAGGCATCCTCCAAACCAGATAAGAACGATTTTGGGAATATAACTATAGAGATTTAATTGGTGATATCATTGCATCGAAT
AGGTTGCTGTTTAGTGTTACTTTTAAGAGTCTAAAGCTTTAGATTAAATGGTTTTAACTTAATTCATCATTAATACACTAATAATGAATAAAACTATAGGTTTTTTTTTT
CTTTCCTGAAAAGAAGCTATACATTTAAGTTTATTTAAGTTGATTTAGGGTATGACCTAATTTTTAATCTAGGCTTAAAATATGTTTACTGTGATTTATAGTTTTGAAAA
GCTTTAAATTGACATCACCAAGTGTCATCACTCATTACTAATGATTCAACTAACTAAATACAAATATGTCTTCCTATTTCTATTTTGCCTTTTGTCAATTAGGAAAAAAG
ACAGAATAATTTCAGCAACCAACGTGTTGATGAAAGTGAGAATGAACAATGCCAATTCGGCCAGAAATTATTAGTGTACATAAGTCAACCGTTACTATTTCAAAAGTCGA
TTATTGGCTCTTTTATTATGCCCACATTCAATTAAATGAAATAGAAAGAAAACAGAGTTTTAAAAAATTATATAGTGAAATCTTGAACTTTAACAAATATATAAAATAAT
TAAATTCTAATCCAAAGAATTGAAATTGATATAATTATTTGCTGATGGACTATTGACATAAACTGTTGGTTAAGGGCGTAAATTTAACATTCTAATTGCAATACCTTAAC
TAACTAAGGTTGGAATATTCATTTAAAAAAACTAATCAAGGTTGGAACAATAATTTAAAAATAACTAAAACAGTGAAGAAGACATTGGTGACCATGGAAAGAAAATTTTC
ATTTTGGTACCAACATTATCTACGTGGAACAAATTTGGTAGGTTTTAAACTTTGAACTCACGACAACTATTAGTATACTAATAATAATAAATCTTAGCTGGACGACTATA
AAAAGTAAATTACAAATTTATC
Protein sequenceShow/hide protein sequence
MPHSDGRTFHFQAHGEGSFHKPIVKLVSVSSNSQMCEQATEIRKSKGSGLISRRGRTTSGSGQNSKSSVDALLSQSSPALASQNIETPSKIFLINCLCAIQQPLSGHEVA
AEYVKKLEVMIN