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CsGy4G017930 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G017930
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRibonuclease
Genome locationGy14Chr4:23161410..23161803
RNA-Seq ExpressionCsGy4G017930
SyntenyCsGy4G017930
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016442 - RISC complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649665.1 hypothetical protein Csa_012973 [Cucumis sativus]1.21e-65100Show/hide
Query:  MYSSFFFTIVLSFESICYVEGENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQF
        MYSSFFFTIVLSFESICYVEGENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQF
Subjt:  MYSSFFFTIVLSFESICYVEGENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQF

Query:  SSDN
        SSDN
Subjt:  SSDN

KAG6589331.1 Ribonuclease TUDOR 2, partial [Cucurbita argyrosperma subsp. sororia]1.53e-3483.13Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEV N A VESKQKEVLKVIVTEVL G KFYVQTI DQ  TSLQ+QL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

XP_004138013.1 ribonuclease TUDOR 1 [Cucumis sativus]7.13e-3485.54Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  F+PKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

XP_008464356.1 PREDICTED: staphylococcal nuclease domain-containing protein 1 [Cucumis melo]2.81e-3486.75Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

XP_038878676.1 ribonuclease TUDOR 1-like [Benincasa hispida]2.81e-3486.75Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

TrEMBL top hitse value%identityAlignment
A0A0A0LRJ8 Ribonuclease3.45e-3485.54Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  F+PKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

A0A1S3CL97 Ribonuclease1.36e-3486.75Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

A0A5D3BH85 Ribonuclease1.36e-3486.75Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

A0A6J1E6F3 ribonuclease TUDOR 1-like5.57e-3383.13Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEV N A VESKQKEVLKVIVTEVL G KFYVQTI DQ  TSLQ+QL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

E5GBL0 Ribonuclease1.36e-3486.75Show/hide
Query:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVSN A VESKQKEVLKVIVTEVL G KFYVQTI DQ ATSLQQQL  LNLQEVPLI  FSPKKGDIVLAQFS+DN
Subjt:  ENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

SwissProt top hitse value%identityAlignment
Q8VZG7 Ribonuclease TUDOR 11.1e-2162.35Show/hide
Query:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVS  N  TVE++QKE LKV+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+GDIVLAQFS DN
Subjt:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

Q9FLT0 Ribonuclease TUDOR 22.1e-2264.29Show/hide
Query:  ENYVEGEEVSNRAT-VESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEV N ++ VE++QKE LKV+VTEVL G +FYVQT+ DQ   S+Q QL  L+L++ P+I  F+PKKGDIVLAQFS DN
Subjt:  ENYVEGEEVSNRAT-VESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

Q9W0S7 Staphylococcal nuclease domain-containing protein 17.7e-0433.33Show/hide
Query:  NYVEGEEVSNRATVESKQKEVL--------KVIVTEVLDGDKFYVQTIPDQTATSLQQQLETL--NLQEVPLICG-FSPKKGDIVLAQFSSDN
        NYVE        T E K+ +V+         VIVTE+ +   F+ Q++  ++ + L+  +  L  + Q  P I G ++PK+GD+V AQF+ DN
Subjt:  NYVEGEEVSNRATVESKQKEVL--------KVIVTEVLDGDKFYVQTIPDQTATSLQQQLETL--NLQEVPLICG-FSPKKGDIVLAQFSSDN

Arabidopsis top hitse value%identityAlignment
AT5G07350.1 TUDOR-SN protein 17.6e-2362.35Show/hide
Query:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVS  N  TVE++QKE LKV+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+GDIVLAQFS DN
Subjt:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

AT5G07350.2 TUDOR-SN protein 17.6e-2362.35Show/hide
Query:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEVS  N  TVE++QKE LKV+VTEVL G +FYVQ+  DQ   S+Q QL +L++++ P+I  F+PK+GDIVLAQFS DN
Subjt:  ENYVEGEEVS--NRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN

AT5G61780.1 TUDOR-SN protein 21.5e-2364.29Show/hide
Query:  ENYVEGEEVSNRAT-VESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN
        ENYVEGEEV N ++ VE++QKE LKV+VTEVL G +FYVQT+ DQ   S+Q QL  L+L++ P+I  F+PKKGDIVLAQFS DN
Subjt:  ENYVEGEEVSNRAT-VESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTCTTCTTTCTTTTTTACCATTGTTTTATCTTTTGAGTCCATTTGTTATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGA
AAGCAAACAGAAAGAAGTGCTCAAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGGACCAAACAGCCACTTCTCTACAGCAGCAAC
TAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATCTGTGGTTTTAGTCCTAAAAAAGGTGATATCGTCCTAGCTCAATTTAGTTCAGACAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTCTTCTTTCTTTTTTACCATTGTTTTATCTTTTGAGTCCATTTGTTATGTTGAAGGGGAGAACTATGTTGAAGGGGAGGAAGTGTCCAATCGTGCAACTGTTGA
AAGCAAACAGAAAGAAGTGCTCAAGGTAATTGTCACCGAGGTTTTGGATGGTGACAAGTTTTATGTTCAGACAATTCCGGACCAAACAGCCACTTCTCTACAGCAGCAAC
TAGAGACTTTGAATCTTCAAGAAGTCCCTTTAATCTGTGGTTTTAGTCCTAAAAAAGGTGATATCGTCCTAGCTCAATTTAGTTCAGACAACTAG
Protein sequenceShow/hide protein sequence
MYSSFFFTIVLSFESICYVEGENYVEGEEVSNRATVESKQKEVLKVIVTEVLDGDKFYVQTIPDQTATSLQQQLETLNLQEVPLICGFSPKKGDIVLAQFSSDN