| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035050.1 putative retrotransposon [Cucumis melo var. makuwa] | 8.38e-62 | 54.59 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKKKNDGEKVLM--GDSDTCDIKG--
M+ +KGLEENL+EFQKI+VDLNNI EKMSD NQ VILLNSL + YREV A IKY +SLTM++ L+ALKTRNLEIKK++ E++LM G SD KG
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKKKNDGEKVLM--GDSDTCDIKG--
Query: ----------------------------------------TGS------VKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKG
GS V+IA HDEMI LT+VKYV ELK NLISLGELDRS Y K++N + KVTKG
Subjt: ----------------------------------------TGS------VKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKG
Query: SLIKLKGTLRNGLYVLEDTAVSGSVATTS
SLIKL+GTLRNGLYVLE TAVSG + S
Subjt: SLIKLKGTLRNGLYVLEDTAVSGSVATTS
|
|
| KAA0036441.1 hypothetical protein E6C27_scaffold147G00070 [Cucumis melo var. makuwa] | 1.72e-72 | 57.71 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENLN+FQKI+VDLNNI+EK+SD NQA+ILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTR LEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ------------------------------KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKV
K+DG KVL+GD+ TC++KGTGSV IATHD MIR LT+V+YV ELK N IS+GELD SGY K+EN ++KV
Subjt: ------------------------------KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKV
Query: TKGSLIKLKGTLRNGLYVLEDTAVSGS
TKGSL+KL+ TLRNGLYVLE TAVSGS
Subjt: TKGSLIKLKGTLRNGLYVLEDTAVSGS
|
|
| KAA0046503.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.99e-61 | 45.27 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
+D SK LEENLNEFQKI+VDLNNI EKMSD NQ +ILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSG
K+DG KVL+GD+ TC++KGTGSV IATHD MIR LT+V+YV ELK NLISLG+LDRSGY K+EN ++KVTKGSL+KL+GTLRNGLYVLE TAVSG
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSG
|
|
| KAA0047995.1 retrotransposon protein, putative, Ty1-copia sub-class [Cucumis melo var. makuwa] | 3.12e-61 | 45.39 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENL+EFQKI+VDLNNI EKMSD NQAVILLNSLP+TYREVKAAIKY W+SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
K DG KVL+GD+ TCD+KGTGSV+IATHD M+R LT+V+YV +LK NLISLGELDRSG K EN ++KVTKGSL+KL+GTLR+GLYVLE T VSGS A
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
Query: TSEK
S K
Subjt: TSEK
|
|
| TYK10877.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 4.60e-61 | 44.7 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENL EFQKI+VDLNNI EKMSD NQAVILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
K DG KVL+GD+ TCD+KGTGSV+IATHD M+R LT+V+YV +LK NLISLGELDRSG K EN ++KVTKGS +KL+GTLR+GLYVLE T VSGS A
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
Query: TS
S
Subjt: TS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SVM2 Putative retrotransposon | 4.06e-62 | 54.59 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKKKNDGEKVLM--GDSDTCDIKG--
M+ +KGLEENL+EFQKI+VDLNNI EKMSD NQ VILLNSL + YREV A IKY +SLTM++ L+ALKTRNLEIKK++ E++LM G SD KG
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKKKNDGEKVLM--GDSDTCDIKG--
Query: ----------------------------------------TGS------VKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKG
GS V+IA HDEMI LT+VKYV ELK NLISLGELDRS Y K++N + KVTKG
Subjt: ----------------------------------------TGS------VKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKG
Query: SLIKLKGTLRNGLYVLEDTAVSGSVATTS
SLIKL+GTLRNGLYVLE TAVSG + S
Subjt: SLIKLKGTLRNGLYVLEDTAVSGSVATTS
|
|
| A0A5A7U2U7 Retrotransposon protein, putative, Ty1-copia sub-class | 1.51e-61 | 45.39 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENL+EFQKI+VDLNNI EKMSD NQAVILLNSLP+TYREVKAAIKY W+SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
K DG KVL+GD+ TCD+KGTGSV+IATHD M+R LT+V+YV +LK NLISLGELDRSG K EN ++KVTKGSL+KL+GTLR+GLYVLE T VSGS A
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
Query: TSEK
S K
Subjt: TSEK
|
|
| A0A5D3BP49 Uncharacterized protein | 8.35e-73 | 57.71 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENLN+FQKI+VDLNNI+EK+SD NQA+ILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTR LEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ------------------------------KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKV
K+DG KVL+GD+ TC++KGTGSV IATHD MIR LT+V+YV ELK N IS+GELD SGY K+EN ++KV
Subjt: ------------------------------KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKV
Query: TKGSLIKLKGTLRNGLYVLEDTAVSGS
TKGSL+KL+ TLRNGLYVLE TAVSGS
Subjt: TKGSLIKLKGTLRNGLYVLEDTAVSGS
|
|
| A0A5D3BRV3 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.87e-61 | 45.27 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
+D SK LEENLNEFQKI+VDLNNI EKMSD NQ +ILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSG
K+DG KVL+GD+ TC++KGTGSV IATHD MIR LT+V+YV ELK NLISLG+LDRSGY K+EN ++KVTKGSL+KL+GTLRNGLYVLE TAVSG
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSG
|
|
| A0A5D3CFX6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.23e-61 | 44.7 | Show/hide |
Query: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
MD SK LEENL EFQKI+VDLNNI EKMSD NQAVILLNSLP+TYREVKAAIKY +SLTMS+ L+ALKTRNLEIKK
Subjt: MDPSKGLEENLNEFQKIIVDLNNISEKMSDVNQAVILLNSLPQTYREVKAAIKYSWNSLTMSVALNALKTRNLEIKK-----------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
K DG KVL+GD+ TCD+KGTGSV+IATHD M+R LT+V+YV +LK NLISLGELDRSG K EN ++KVTKGS +KL+GTLR+GLYVLE T VSGS A
Subjt: KNDGEKVLMGDSDTCDIKGTGSVKIATHDEMIRKLTHVKYVIELKCNLISLGELDRSGYVFKYENELLKVTKGSLIKLKGTLRNGLYVLEDTAVSGSVAT
Query: TS
S
Subjt: TS
|
|
