; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G019380 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G019380
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description54S ribosomal protein L37, mitochondrial-like
Genome locationGy14Chr4:25729578..25732147
RNA-Seq ExpressionCsGy4G019380
SyntenyCsGy4G019380
Gene Ontology termsGO:0005762 - mitochondrial large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR013870 - Ribosomal protein L37, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649745.1 hypothetical protein Csa_012025 [Cucumis sativus]3.78e-8099.24Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        MSQ+RLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADLKRFIKLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
XP_004144674.3 39S ribosomal protein L54, mitochondrial [Cucumis sativus]1.47e-8199.24Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        MSQ+RLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADLKRFIKLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]5.92e-7793.13Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]1.46e-7693.13Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]3.68e-7188.55Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        MSQ+RLFRR+I V+SK+LIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP WLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        N E+LPY DLKRF+KLDTRA+IKENNS KAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
TrEMBL top hitse value%identityAlignment
A0A0A0KYS4 Uncharacterized protein5.02e-82100Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADLKRFIKLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X22.87e-7793.13Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
A0A1S4DUD4 39S ribosomal protein L54, mitochondrial isoform X17.05e-7793.13Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
A0A5D3CXE8 39S ribosomal protein L547.05e-7793.13Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        +SQ+R FRRNIIVSSK+LIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLW+LL+KHPPLSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        NAESLPYADL+RF+KLDTRARIKENNSIKAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like2.93e-6380.92Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK
        MSQ+RLFRR+++ ++K+LI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYP WLW L++K P LSELRRK
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRK

Query:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
        +A++LPY DLKRF+KLDTRARIKENNS KAK
Subjt:  NAESLPYADLKRFIKLDTRARIKENNSIKAK
SwissProt top hitse value%identityAlignment
Q9CPW3 39S ribosomal protein L54, mitochondrial6.0e-0638.54Show/hide
Query:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRARIKENNSI
        KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+  +N  PP  +L     ES  Y  L R   +    R+ +N  +
Subjt:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADLKRFIKLDTRARIKENNSI
Arabidopsis top hitse value%identityAlignment
AT3G01740.1 Mitochondrial ribosomal protein L372.9e-4065.15Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRR
        M+++ L R +   SSK++++    RTF AA  K+KKG KGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPKI+ DS+YP WLW+LL+K P LSELRR
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRR

Query:  KNAESLPYADLKRFIKLDTRARIKENNSIKAK
        KN E+LPY DLKRF+KLDTR +IKENNSIKAK
Subjt:  KNAESLPYADLKRFIKLDTRARIKENNSIKAK
AT5G14290.1 Mitochondrial ribosomal protein L372.4e-3459.09Show/hide
Query:  MSQVRLFRRNIIVSSKNLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRR
        M+ +R+F  + I  SK++++    RTFA A GK+KK  +G    DAPKAS LSKE+KS+ VV AN LK+G DPKI+ +S++P +LW+LL+K P LSELRR
Subjt:  MSQVRLFRRNIIVSSKNLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRR

Query:  KNAESLPYADLKRFIKLDTRARIKENNSIKAK
        KN E+L + DLKRF+KLDTRARIKEN+SIKAK
Subjt:  KNAESLPYADLKRFIKLDTRARIKENNSIKAK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAAGTTAGATTGTTTAGAAGGAACATTATTGTTAGTAGCAAAAATCTAATACAACTGACATCTGTACGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATC
TAAAGGGGGTGCAGCTGCCGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAATCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAA
TTATGGCAGACTCGGAGTATCCTGCTTGGCTGTGGAATTTGCTTAATAAGCATCCACCTCTGAGTGAATTACGAAGAAAGAATGCTGAAAGTCTTCCCTACGCAGATCTC
AAACGCTTTATTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAA
mRNA sequenceShow/hide mRNA sequence
GGTTTATTACCTTTGTTTCTTTAAACCCACCATCAGTAGCAGCCACCTCCATCTCACTCATCTCGCATCTCCTCTTTCGTCCCCTCTTCTTCCATCTCTTTGATCTCCAA
CGACACGCGGCCAATATCATCGTCTCCTCTTCTTCCATCTCTCAACACACTTCCCAACATCAATCCAAAATCAAACTAGCACAAGCCATGAACTTGAAGAAATGAAAATT
TGAAAGATAATAAAATTTCAATCTTACGAATTTTAAGAGGAGAGGGGAAAAACATCAGCAGGCGTACGAGAGCTGACTACGGAGGCAAGCGAGAGAAAAAGAAAAATATG
AGCCAAGTTAGATTGTTTAGAAGGAACATTATTGTTAGTAGCAAAAATCTAATACAACTGACATCTGTACGAACATTTGCTGCCGGAGGCAAATCAAAGAAGGGATCTAA
AGGGGGTGCAGCTGCCGATGCTCCTAAAGCATCAATTCTAAGTAAAGAGGTGAAATCTACGACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAAAAATTA
TGGCAGACTCGGAGTATCCTGCTTGGCTGTGGAATTTGCTTAATAAGCATCCACCTCTGAGTGAATTACGAAGAAAGAATGCTGAAAGTCTTCCCTACGCAGATCTCAAA
CGCTTTATTAAATTGGATACTCGAGCAAGGATCAAGGAAAACAATTCTATTAAGGCCAAGTAACAATATAGTAGACGAAGACTTTCTTTTTGTTTCTTTTGTGAATGTAA
TGCAACTCTTTCTCAAACTCTGCATCAATGTGCAAGTCCTCACTTGCATTCTCCCTTTTATTTTTCTAAGCCATTTTAATGTACTACTTTCAGATGAAATTCGCCCAGTT
TGGCTTAATTTGAAGGCCAATCTTGTTATTTTTCTTTTGCTTTTGCAGTAAAAAATATGAGAGTGGGAGAAGTCAAGTCAATCTTGTTATATTTCTTTCGAATGCATAAA
TGTCCCCTTTGAGCAAATTTATGAAAATAGAATCTAAAAGTTTTTTTTTTCTTTTAAACAACAGTTTCCAT
Protein sequenceShow/hide protein sequence
MSQVRLFRRNIIVSSKNLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPAWLWNLLNKHPPLSELRRKNAESLPYADL
KRFIKLDTRARIKENNSIKAK