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CsGy4G020055 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G020055
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionAuxin-responsive family protein
Genome locationGy14Chr4:26953796..26954420
RNA-Seq ExpressionCsGy4G020055
SyntenyCsGy4G020055
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024703.1 hypothetical protein SDJN02_13521, partial [Cucurbita argyrosperma subsp. argyrosperma]1.80e-6772.84Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE-------------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALID
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCE+  E+ E+  E             ++VSGSNVI+YVGSTRK+Y I+SKYLSHPLLNALID
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE-------------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALID

Query:  KSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        KSK  K  +DDDDD       +CI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  KSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]8.48e-8690.32Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSN-VILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG+N V+LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD D
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSN-VILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD

Query:  D-----DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        D     DDG  DDE+CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  D-----DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]4.67e-9699.33Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DD-GHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        DD GHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DD-GHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]9.54e-6974.84Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE----------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSK
        M K+NSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC++  E+ E++ E          +KVSGSNVI+YVGSTRK+YAI+SKYLSHPLLNALIDKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIE----------QKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSK

Query:  SKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
          K  ++DDDD       ECI VRCEVVLFDHLLWMLENSDPNI FDSNLEELAELYVF
Subjt:  SKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]1.93e-7482.35Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQIEQ--KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVD
        MKKIN LLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC  + +EEDFEQQ +Q  KVSG++VILYVGSTRK+YAI+SKYLSHPLLNALIDKSKSKKL+ 
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVC--EKQEEDFEQQIEQ--KVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVD

Query:  DDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        +DDD++     E+CI VRCEVVLFDHLLWMLENSDPNI+FDSNLEELAELYVF
Subjt:  DDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A0A0L464 Uncharacterized protein1.65e-4864.43Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVG                                    
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
                        +VLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A1S3B9J9 uncharacterized protein LOC1034876594.11e-8690.32Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSN-VILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQ +QKVSG+N V+LYVGSTRKKYAINSKYL HPLLNALIDKSKSKKLVDD D
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSN-VILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDD

Query:  D-----DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        D     DDG  DDE+CILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
Subjt:  D-----DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

A0A2C9UHW2 Uncharacterized protein2.15e-4862.67Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRED+W  +K  +D +++ E         ++VGSTRK+Y INSKYLSHPL+NALI+KSK K        
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDP-NITFDSNLEELAELYVF
               EE ++V+CEVVLFDHLLWMLEN+DP N++ DS LEELA+LYVF
Subjt:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDP-NITFDSNLEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073983.27e-6674.52Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSK
        MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW +C       E++EED +QQ  +KV GSNVI+YVGSTRKKY I+SK+LSHPL+NALIDKSKSK
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLW-VC-------EKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSK

Query:  KLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
                     +D E I VRCEVVLFDHLLWMLENSDPNITFDSNLEELA+LYVF
Subjt:  KLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

B9RI47 Uncharacterized protein4.15e-5063.76Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD
        MKKIN +LRKCKSLSRQLGRSSSYSSLRSKSTRE+LW   K+E++  Q            L+VGSTRK+Y I+SKYLSHPL+NALI KSK ++       
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDD

Query:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
               EE ++V+CEVVLFDHLLWMLEN+DPN++FDS LEELAELYVF
Subjt:  DDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR762.3e-0940.23Show/hide
Query:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y ++S  +SHPL   L               D G   ++  I V CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY

Q9C9E1 Auxin-responsive protein SAUR781.4e-1141.11Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S S+ +          E D E I+V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

Q9LQI6 Auxin-responsive protein SAUR776.4e-1238.95Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++         D+E +LV CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family4.5e-1338.95Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF
        ++YVG +R+ Y ++S  ++HPL   L+D  +S + +++         D+E +LV CEVVLF+HLLWML+NS     D +     ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENS-----DPNITFDSNLEELAELYVF

AT1G72430.1 SAUR-like auxin-responsive protein family1.0e-1241.11Show/hide
Query:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF
        ++YVG TR+ Y +    +SHPL   L+D+S S+ +          E D E I+V CEVVLF+HLLWML++         ++EELAE Y +
Subjt:  ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF

AT3G12955.1 SAUR-like auxin-responsive protein family2.2e-2345.27Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNV-ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDD
        ++  +LR+CKS+S QLGRS SY+SLRSKS R D        +D  Q ++Q  + S    + VG T+K Y I+ K+L HPLLNAL++K   ++  ++DD++
Subjt:  KINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNV-ILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDD

Query:  DGHEDDEECIL-VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV
        DG      CI+ V+CEVVLFDHLLWMLE  D  +    +L++ A LY+
Subjt:  DGHEDDEECIL-VRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYV

AT5G20810.1 SAUR-like auxin-responsive protein family5.0e-0427.91Show/hide
Query:  VSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSN
        V   N+ +YVG   +++ I + YLSH L   L++K+          +++   D    + + CEV  F +LL  +EN+  ++  D N
Subjt:  VSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSN

AT5G20820.1 SAUR-like auxin-responsive protein family1.6e-1040.23Show/hide
Query:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY
        +YVG TR+ Y ++S  +SHPL   L               D G   ++  I V CEVVLF+HLLWMLEN+D + +   ++ EL E Y
Subjt:  LYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEECILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAGAGAAGATCTTTG
GGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAATATGCAATAAATT
CAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGGACATGAAGATGATGAAGAATGT
ATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATTGGCTGAACTTTA
TGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
AAACCCAACCCCCCCATCTCTCTTTTCTCTCTCTTTTTTCCTCAATTTCAGATTCTCCTTCAAGTCTCCTATATAAATCTCTCTCAAATCAAATCAAGAAAAGAAAACTT
AAAAAGTAAATAATGAAAAAAATAAATTCTCTATTGAGAAAATGCAAAAGCCTTTCAAGGCAATTGGGAAGATCTTCATCATACAGCAGCTTGAGATCAAAGTCCACAAG
AGAAGATCTTTGGGTTTGTGAAAAACAAGAAGAAGACTTTGAGCAACAAATTGAGCAAAAGGTGAGTGGCAGTAATGTAATTTTATATGTTGGAAGTACAAGAAAGAAAT
ATGCAATAAATTCAAAATATTTGAGCCATCCTTTGTTAAATGCTCTTATTGATAAATCCAAGTCTAAGAAATTAGTTGATGATGATGATGATGATGATGGACATGAAGAT
GATGAAGAATGTATTTTAGTGAGATGTGAAGTTGTTTTATTTGATCATCTTCTGTGGATGTTGGAAAATTCAGATCCAAATATTACTTTTGATTCTAATTTGGAGGAATT
GGCTGAACTTTATGTTTTTTAGGATTTCATGTATGGAAATTCAATGGAAAAAGTTGTTATGTATCCGAGTTTCCT
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYSSLRSKSTREDLWVCEKQEEDFEQQIEQKVSGSNVILYVGSTRKKYAINSKYLSHPLLNALIDKSKSKKLVDDDDDDDGHEDDEEC
ILVRCEVVLFDHLLWMLENSDPNITFDSNLEELAELYVF