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CsGy4G020097 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G020097
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBeta-galactosidase
Genome locationGy14Chr4:26984817..26985158
RNA-Seq ExpressionCsGy4G020097
SyntenyCsGy4G020097
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040497.1 reverse transcriptase [Cucumis melo var. makuwa]3.97e-4169.03Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MT+PI S VDSKMSEND S+I + EDM E DNVDE E+ AE GGNE EQ H GNLDEYDPSLDI I LRKG +S  +HPICNY+ Y+S+S QF AF A L
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        DSIVI K+IHI+L
Subjt:  DSIVILKSIHIAL

KAA0052368.1 reverse transcriptase [Cucumis melo var. makuwa]8.21e-4470.8Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MT+PIKSC  SKMSEND  DITI EDM E D VDE E++AE  GNEAEQGH  NLDEYDP L+I I LR+G R   KHPICNY+SYD+LSLQF AFTASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        D  VI K+IHI L
Subjt:  DSIVILKSIHIAL

KAA0053590.1 reverse transcriptase [Cucumis melo var. makuwa]1.35e-3761.06Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        M +P + C ++ MSEND SD+ + E+M E +  DE E++ E   NEAEQGH+  LDEYDPSLDI IALRKG RSY KHPICNY+SYD+LS QF AFTASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        DS +IL +I+  L
Subjt:  DSIVILKSIHIAL

KAA0055539.1 Beta-galactosidase [Cucumis melo var. makuwa]4.40e-4071.68Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MTSPI SCVDSKMSEND S+I   EDM E D+VDE E+KAE  GNEAEQ  SGNLDEY+P LDI I  RKG RS  KHPICNY+SY+SLS QF AF ASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
         S VI K+IHIAL
Subjt:  DSIVILKSIHIAL

TYK01386.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]2.77e-4070.8Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MTSPI SCVDSKMSEND S+I   EDM E D+VDE E+KAE  GNEAEQ  SGNLDEY+P LDI I  RKG R   KHPICNY+SY+SLS QF AF ASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
         S VI K+IHIAL
Subjt:  DSIVILKSIHIAL

TrEMBL top hitse value%identityAlignment
A0A5A7TG08 Reverse transcriptase1.92e-4169.03Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MT+PI S VDSKMSEND S+I + EDM E DNVDE E+ AE GGNE EQ H GNLDEYDPSLDI I LRKG +S  +HPICNY+ Y+S+S QF AF A L
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        DSIVI K+IHI+L
Subjt:  DSIVILKSIHIAL

A0A5A7UAX9 Reverse transcriptase3.97e-4470.8Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MT+PIKSC  SKMSEND  DITI EDM E D VDE E++AE  GNEAEQGH  NLDEYDP L+I I LR+G R   KHPICNY+SYD+LSLQF AFTASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        D  VI K+IHI L
Subjt:  DSIVILKSIHIAL

A0A5A7UEG6 Reverse transcriptase6.53e-3861.06Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        M +P + C ++ MSEND SD+ + E+M E +  DE E++ E   NEAEQGH+  LDEYDPSLDI IALRKG RSY KHPICNY+SYD+LS QF AFTASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
        DS +IL +I+  L
Subjt:  DSIVILKSIHIAL

A0A5A7UQ02 Beta-galactosidase2.13e-4071.68Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MTSPI SCVDSKMSEND S+I   EDM E D+VDE E+KAE  GNEAEQ  SGNLDEY+P LDI I  RKG RS  KHPICNY+SY+SLS QF AF ASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
         S VI K+IHIAL
Subjt:  DSIVILKSIHIAL

A0A5D3BT40 Cysteine-rich RLK (Receptor-like protein kinase) 81.34e-4070.8Show/hide
Query:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL
        MTSPI SCVDSKMSEND S+I   EDM E D+VDE E+KAE  GNEAEQ  SGNLDEY+P LDI I  RKG R   KHPICNY+SY+SLS QF AF ASL
Subjt:  MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASL

Query:  DSIVILKSIHIAL
         S VI K+IHIAL
Subjt:  DSIVILKSIHIAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGTCCTATTAAATCATGTGTTGATAGTAAAATGAGTGAGAATGATAGTTCTGATATTACTATTTATGAAGATATGAGAGAAAATGACAATGTTGATGAGATTGA
GATCAAAGCAGAAATTGGTGGTAATGAGGCTGAACAAGGTCATTCAGGTAATCTTGATGAGTATGATCCTTCTCTAGACATTCTCATTGCGCTGAGAAAAGGTATTAGGT
CTTACATGAAACACCCTATTTGTAACTATATTTCCTATGATAGTCTATCTTTACAGTTCGGGGCCTTCACAGCTAGCCTTGACTCTATCGTGATATTGAAAAGTATTCAC
ATTGCTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGTCCTATTAAATCATGTGTTGATAGTAAAATGAGTGAGAATGATAGTTCTGATATTACTATTTATGAAGATATGAGAGAAAATGACAATGTTGATGAGATTGA
GATCAAAGCAGAAATTGGTGGTAATGAGGCTGAACAAGGTCATTCAGGTAATCTTGATGAGTATGATCCTTCTCTAGACATTCTCATTGCGCTGAGAAAAGGTATTAGGT
CTTACATGAAACACCCTATTTGTAACTATATTTCCTATGATAGTCTATCTTTACAGTTCGGGGCCTTCACAGCTAGCCTTGACTCTATCGTGATATTGAAAAGTATTCAC
ATTGCTTTATAG
Protein sequenceShow/hide protein sequence
MTSPIKSCVDSKMSENDSSDITIYEDMRENDNVDEIEIKAEIGGNEAEQGHSGNLDEYDPSLDILIALRKGIRSYMKHPICNYISYDSLSLQFGAFTASLDSIVILKSIH
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