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CsGy4G020460 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G020460
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCYSTM domain-containing protein
Genome locationGy14Chr4:27360733..27362294
RNA-Seq ExpressionCsGy4G020460
SyntenyCsGy4G020460
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032928.1 extensin-like [Cucumis melo var. makuwa]2.00e-2993.1Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]2.65e-2773.97Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFST--PVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPPS T P  Y APPPAGYPT++G  +S   P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFST--PVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]8.84e-3586.3Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS QPA V YPPPS T+PTSY+APPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]5.12e-3484.93Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTP--VPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPPS T P SY+APPPAGYPTR+GGDFS P  VPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTP--VPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]1.29e-45100Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein6.23e-46100Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A5D3DX21 Extensin-like9.69e-3093.1Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFS--TPVPAETKSRGDGFWKG

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like2.48e-3484.93Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTP--VPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPPS T P SY+APPPAGYPTR+GGDFS P  VPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTP--VPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein3.68e-2772.6Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFST--PVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPPS T P  Y APPPAGYPT++G  +S   P P ETKSRGDGFWKGCCAALCCCCV+DACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFST--PVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein9.02e-2873.97Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDF--STPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPPS TVP  Y APPPAGYPT++G  +  + P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDF--STPVPAETKSRGDGFWKGCCAALCCCCVLDACF

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH26.9e-0440.68Show/hide
Query:  PPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        PP       Y   P  GYP      +  P   + +    GF +GC AALCCCC+LDACF
Subjt:  PPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein1.1e-1257.35Show/hide
Query:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPV-PAETKSRGDGFWKGCCAALCCCCVLDACF
        Q AG N PPP ST     S PPP GYPT +    S      ETKS+GDGF+KGC AA+CCCC LD CF
Subjt:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPV-PAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32190.1 unknown protein1.3e-1358.57Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y  PPP GYPT +    +T  P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32210.1 unknown protein2.2e-1358.57Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y APPP GYPT +    +T    ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)1.1e-0955.93Show/hide
Query:  PSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF
        PS T    Y++PPP GYPTR+      P  A ET S+G    +GCCAA+CCCCVLDACF
Subjt:  PSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22240.1 unknown protein1.0e-1555.56Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF
        M+ ++   ++   PS T    Y++PPP GYPTR+      P  A ETKS+GDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPA-ETKSRGDGFWKGCCAALCCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCTGCTCAACCTGCAGGTGTTAATTATCCTCCACCGTCGTCCACGGTGCCAACCTCTTATTCAGCTCCTCCACCGGCGGGGTATCCGACGAGAGAAGGCGGAGA
CTTCTCTACCCCTGTTCCGGCTGAAACAAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGATGCCTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
AAAGCACCTCTTCTCTTTTGTCTTTATATATTCTCCCTTCCTTTCACGCGGTTTCGCCGCCCTTGGCCGGTCCCTCTCCGCCGCCTCCATATCTCTCCCCCACATATCCT
CTCTCTCCCTATATATATATATATATAATCCGATCTCTCCTAAACCATCAAACTTAATTAAACCCCAAAGTTTAAAACAACAGAAAACATTTCTGATTTTCCTGACTTGT
TCTCTTGCAAATTAAACATGAGTTCTGCTCAACCTGCAGGTGTTAATTATCCTCCACCGTCGTCCACGGTGCCAACCTCTTATTCAGCTCCTCCACCGGCGGGGTATCCG
ACGAGAGAAGGCGGAGACTTCTCTACCCCTGTTCCGGCTGAAACAAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGA
TGCCTGCTTCTAGAGAGAGATTATGGATATAATTAATCAGCATTATTGTTGTTATTTTAGTGTTTTTATTTTAATTTGTGAATTTTTGGATTAATCATGTCATGATGTTG
TAATAATAAATTTGGGTGTTTGAAATTTCTTGCTGATGAAACTATATTGGACTAATTCTGTGATCATATCCCATATATATATATATGTATATTTGTTATTCTTTTTGGTG
TGGAGTTGTTGGGTTTTGTTTGTTTAAATATGATAATGACACGTGGCATATTATTTTAATGAAACGTGTGCGTTGAGAAGATAAGGATGAGAAAGAGAGAATTTTTTTTA
TTTTCTTATTTTATTTATTTGGTATTTGGTTACCTATTCAACTTGTTTACGCATATTATTATTATTATTATTCCCTATATTTTATAATAAGGTTTTCTCACAAATGTATG
GAATAGATTCACTTTTTTTTTTTTGATACTGATTTGATTTGATCCTAAAGTTGGAATATATTGTATAAAGATATTATATTGATTAATTAATAAAGGATCAAGTATTGAAT
TTCATCTTAATTAAATTTAGCACTTACACTCAAAATGAATAT
Protein sequenceShow/hide protein sequence
MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTREGGDFSTPVPAETKSRGDGFWKGCCAALCCCCVLDACF