; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G021745 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G021745
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionHistidine-rich glycoprotein-like isoform X2
Genome locationGy14Chr4:28358666..28359100
RNA-Seq ExpressionCsGy4G021745
SyntenyCsGy4G021745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064320.1 histidine-rich glycoprotein-like isoform X2 [Cucumis melo var. makuwa]1.51e-4572.66Show/hide
Query:  MIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQVEHHHEHHVQVEHHHEH----
        MI+AT+SIVIV  PMGA+AIPLVGPIAQCIQGCT+SLSTLTPGYCMN+CGAEY PL N +++T         HQ+HHVQVEHHHEHHV  EHHHEH    
Subjt:  MIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQVEHHHEHHVQVEHHHEH----

Query:  -HVQVEHHHEHHVQVEHHHGQHHIHGVN
         HVQVEHHHEHHVQVEHH  Q   HGVN
Subjt:  -HVQVEHHHEHHVQVEHHHGQHHIHGVN

KAE8649837.1 hypothetical protein Csa_012364 [Cucumis sativus]1.07e-87100Show/hide
Query:  MINLGKMSRTSRMVTIVPIMTMIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQ
        MINLGKMSRTSRMVTIVPIMTMIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQ
Subjt:  MINLGKMSRTSRMVTIVPIMTMIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQ

Query:  VEHHHEHHVQVEHHHEHHVQVEHHHEHHVQVEHHHGQHHIHGVN
        VEHHHEHHVQVEHHHEHHVQVEHHHEHHVQVEHHHGQHHIHGVN
Subjt:  VEHHHEHHVQVEHHHEHHVQVEHHHEHHVQVEHHHGQHHIHGVN

KAG6591952.1 hypothetical protein SDJN03_14298, partial [Cucurbita argyrosperma subsp. sororia]1.61e-0952.46Show/hide
Query:  IMTMIIATVSIVIVLFPMGADA-IPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLA
        ++TM++A   I++ L PM A+A +P  G ++QCIQGCTKSL+ LT GYC+ LC AE+ PL+
Subjt:  IMTMIIATVSIVIVLFPMGADA-IPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLA

KAG6607883.1 hypothetical protein SDJN03_01225, partial [Cucurbita argyrosperma subsp. sororia]9.86e-0652.54Show/hide
Query:  MTMIIATVSIV-IVLFPMGADA-IPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSP
        M +IIA ++ V IVL PM A+A IP VG I +CI+ C  SL +L P YC +LC AE+ P
Subjt:  MTMIIATVSIV-IVLFPMGADA-IPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSP

TrEMBL top hitse value%identityAlignment
A0A5A7VAR8 Histidine-rich glycoprotein-like isoform X27.33e-4672.66Show/hide
Query:  MIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQVEHHHEHHVQVEHHHEH----
        MI+AT+SIVIV  PMGA+AIPLVGPIAQCIQGCT+SLSTLTPGYCMN+CGAEY PL N +++T         HQ+HHVQVEHHHEHHV  EHHHEH    
Subjt:  MIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQVEHHHEHHVQVEHHHEH----

Query:  -HVQVEHHHEHHVQVEHHHGQHHIHGVN
         HVQVEHHHEHHVQVEHH  Q   HGVN
Subjt:  -HVQVEHHHEHHVQVEHHHGQHHIHGVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAATTTAGGTAAAATGTCAAGAACATCTAGAATGGTCACGATCGTTCCCATCATGACGATGATTATTGCTACTGTTAGCATTGTCATTGTCTTGTTTCCGATGGG
GGCGGACGCTATCCCGCTTGTCGGTCCAATTGCTCAATGCATCCAAGGGTGCACAAAATCATTGTCAACTTTAACTCCTGGTTATTGCATGAATCTTTGTGGAGCTGAGT
ATAGCCCTTTAGCAAACACTGTAAAAAATACCGCTCTAGCAAACACTGTACAAAATATTCATCAAGAGCATCATGTTCAAGTCGAACATCATCATGAGCATCATGTTCAA
GTCGAGCATCATCATGAGCATCATGTACAAGTCGAACATCATCATGAGCATCATGTTCAAGTCGAACATCATCATGGTCAACACCATATTCATGGTGTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAATTTAGGTAAAATGTCAAGAACATCTAGAATGGTCACGATCGTTCCCATCATGACGATGATTATTGCTACTGTTAGCATTGTCATTGTCTTGTTTCCGATGGG
GGCGGACGCTATCCCGCTTGTCGGTCCAATTGCTCAATGCATCCAAGGGTGCACAAAATCATTGTCAACTTTAACTCCTGGTTATTGCATGAATCTTTGTGGAGCTGAGT
ATAGCCCTTTAGCAAACACTGTAAAAAATACCGCTCTAGCAAACACTGTACAAAATATTCATCAAGAGCATCATGTTCAAGTCGAACATCATCATGAGCATCATGTTCAA
GTCGAGCATCATCATGAGCATCATGTACAAGTCGAACATCATCATGAGCATCATGTTCAAGTCGAACATCATCATGGTCAACACCATATTCATGGTGTTAATTAA
Protein sequenceShow/hide protein sequence
MINLGKMSRTSRMVTIVPIMTMIIATVSIVIVLFPMGADAIPLVGPIAQCIQGCTKSLSTLTPGYCMNLCGAEYSPLANTVKNTALANTVQNIHQEHHVQVEHHHEHHVQ
VEHHHEHHVQVEHHHEHHVQVEHHHGQHHIHGVN