; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy4G022320 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy4G022320
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionCalcium-binding EF-hand
Genome locationGy14Chr4:28809014..28809724
RNA-Seq ExpressionCsGy4G022320
SyntenyCsGy4G022320
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064377.1 Calcium-binding EF-hand [Cucumis melo var. makuwa]3.28e-5695.56Show/hide
Query:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        MAL+FVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFRARQSLKAADADGDGYVTLDELD LLDYA+
Subjt:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

KAG6591371.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]7.36e-5391.01Show/hide
Query:  ALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        A+SF+F NGVSDYKRCPVPFSR+QLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFRARQSLKAAD+DGDGYVTLDELDRLLDY++
Subjt:  ALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

KAG6608480.1 putative calcium-binding protein CML10, partial [Cucurbita argyrosperma subsp. sororia]1.16e-4480.95Show/hide
Query:  FSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        F +G+ DYKRCPVPF+++QLR+IFL+HD DGDGRLSRLELK+AFESLGSNWSRFRARQ LKAAD++GDGYVTLDELD LLDYA+
Subjt:  FSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]7.89e-2455.26Show/hide
Query:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA
        YKR  VPFS +QL  +F  HDGDGDG+L++ ELK AF+ LGS +S FR  ++L+AAD DGDG++++ E+D+L+ YA
Subjt:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA

KGN55186.1 hypothetical protein Csa_012423 [Cucumis sativus]3.41e-5898.89Show/hide
Query:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA+
Subjt:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein1.65e-5898.89Show/hide
Query:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA+
Subjt:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

A0A0A0LRB6 Uncharacterized protein2.07e-2152.63Show/hide
Query:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA
        YKR  VPFS +QL ++F  HD DGDG L++ ELK AFE LGS +  FR  ++L+AAD +GDG +++DE+ +L+ YA
Subjt:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA

A0A2N9FYQ0 Uncharacterized protein7.05e-2250Show/hide
Query:  VSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        V  +KR  +PF+ +QL +IF  HD DGDG+LS+ E+K AF+ LGS W  +RA Q++  ADAD DGY+  +EL +L+ YA+
Subjt:  VSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein3.60e-2253.95Show/hide
Query:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA
        YKR  VPFS +QL ++F  HD DGDG L++ ELK AFE LGS +S FR  ++L+AAD +GDG +++DE+ +L+ YA
Subjt:  YKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYA

A0A5A7VBH2 Calcium-binding EF-hand1.59e-5695.56Show/hide
Query:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI
        MAL+FVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAF+SLGSNWSRFRARQSLKAADADGDGYVTLDELD LLDYA+
Subjt:  MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAI

SwissProt top hitse value%identityAlignment
A0T2M3 Polcalcin Cup a 48.5e-0640.35Show/hide
Query:  QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE
        +L ++F K D +GDG++S  EL     S+GS       +  ++ AD DGDGYV+L E
Subjt:  QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE

O64943 Polcalcin Jun o 24.5e-0739.44Show/hide
Query:  QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIGVSNL
        +L ++F K D +GDG++S  EL     SLGS+      +  ++ ADADGDGYV+L E   L +    V +L
Subjt:  QLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIGVSNL

Q6L4D4 Probable calcium-binding protein CML155.9e-0740.32Show/hide
Query:  PFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE
        P + D+   +F K D +GDGR+SR EL + F S+G   +     + ++ AD+DGDGY++L E
Subjt:  PFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDE

Q8RZB5 Probable calcium-binding protein CML108.2e-0941.89Show/hide
Query:  PVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIG
        P P   +++  +F K D +GDGR+SR EL + FESLG   +     + +  ADADGDG+++LDE   L   A G
Subjt:  PVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIG

Q9LE22 Probable calcium-binding protein CML272.9e-0635.48Show/hide
Query:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL
        ++L+ +F + D +GDG++S LEL   F+++G++++     + L+  D D DGY+ LDE   L
Subjt:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein2.1e-0735.48Show/hide
Query:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL
        ++L+ +F + D +GDG++S LEL   F+++G++++     + L+  D D DGY+ LDE   L
Subjt:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL

AT1G18210.2 Calcium-binding EF-hand family protein2.1e-0735.48Show/hide
Query:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL
        ++L+ +F + D +GDG++S LEL   F+++G++++     + L+  D D DGY+ LDE   L
Subjt:  DQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRL

AT3G03410.1 EF hand calcium-binding protein family8.7e-0636.07Show/hide
Query:  LRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLL
        L+++F+  D DGDG++   E      SLG  ++   + + ++AAD DGDGY+  DE   L+
Subjt:  LRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLL

AT3G50770.1 calmodulin-like 415.1e-0633.85Show/hide
Query:  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLL
        S+++LR +F   D DGDG++S  EL+  F S+G   S   A++++   D D DG +  ++   L+
Subjt:  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLL

AT5G37770.1 EF hand calcium-binding protein family1.5e-0534.29Show/hide
Query:  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIG
        S D ++ +F + D +GDG++S  ELK    +L    S       +K  D DG+G++ LDE   L    IG
Subjt:  SRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGAGTTTCGTCTTCAGCAACGGCGTTAGCGACTACAAGCGATGTCCTGTTCCTTTCTCCAGAGATCAGCTTCGTGATATTTTCCTCAAGCACGACGGCGACGG
CGATGGCCGTCTTTCACGTCTGGAGTTGAAATCGGCCTTTGAATCCTTAGGGTCTAATTGGAGCCGTTTCAGAGCTCGCCAGTCACTCAAAGCCGCGGATGCCGACGGCG
ATGGTTACGTTACTCTCGATGAACTTGATCGCCTTCTTGATTACGCTATCGGAGTTTCAAATCTTTCCGTTCCCCCCGCCGCGAGTTCGCCACTTGTTGTAGTTTGA
mRNA sequenceShow/hide mRNA sequence
CAACATATTTCTTCAACCTCCTCCTCATCATCATCCCGTAAACTTATAATAATAATAATAATAATAATAATAATAAAAAGAAAATTCCATGGCTTTGAGTTTCGTCTTCA
GCAACGGCGTTAGCGACTACAAGCGATGTCCTGTTCCTTTCTCCAGAGATCAGCTTCGTGATATTTTCCTCAAGCACGACGGCGACGGCGATGGCCGTCTTTCACGTCTG
GAGTTGAAATCGGCCTTTGAATCCTTAGGGTCTAATTGGAGCCGTTTCAGAGCTCGCCAGTCACTCAAAGCCGCGGATGCCGACGGCGATGGTTACGTTACTCTCGATGA
ACTTGATCGCCTTCTTGATTACGCTATCGGAGTTTCAAATCTTTCCGTTCCCCCCGCCGCGAGTTCGCCACTTGTTGTAGTTTGAAGTCTACATGTATTATATACTCAAA
ATAAATTTCAATAACTGCCCTTCACCTTCTATTATTTCCTTTTTTTATCTTTTATACTTTCAAGCTTTTTGCTTGATCTTAGATGAGACCAACTTTTTTATCTTTTATAT
TCGATGGGGCAATTTACATGCCCTAATTGAGCTGATTAACAAT
Protein sequenceShow/hide protein sequence
MALSFVFSNGVSDYKRCPVPFSRDQLRDIFLKHDGDGDGRLSRLELKSAFESLGSNWSRFRARQSLKAADADGDGYVTLDELDRLLDYAIGVSNLSVPPAASSPLVVV