CuGenDBv2

Gene ID	CsGy4G024370
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Protein FAM33A
Genome location	Gy14Chr4:30150331..30155015
RNA-Seq Expression	CsGy4G024370
Synteny	CsGy4G024370
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

8.15e-87

85.99

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MG+DH L QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQ
        SMG PFVSD DDPAF +FKQITEEWTTQVQSK  GEDGQEDA+C+DVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQ

XP_004145489.1 spindle and kinetochore-associated protein 2 [Cucumis sativus]

2.28e-107

100

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

XP_008452819.1 PREDICTED: spindle and kinetochore-associated protein 2 [Cucumis melo]

1.08e-98

94.3

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA +EFKQITEEWTTQVQSKF GED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

XP_022141272.1 spindle and kinetochore-associated protein 2 [Momordica charantia]

2.14e-87

86.54

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MG+ HHL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L+AKQDVID+ARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVV
        SMGIP VSDLDD AF++FK+ITEEWTTQVQSK  G+DGQEDAD NDVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVV

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

7.60e-92

91.5

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Query:  HLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIP
        HL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYPESANPMKLVSRIKKI+DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNMLQK+QASMG+P
Subjt:  HLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIP

Query:  FVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        FVSDLDDPAF+EFKQITEEWT QVQSKF GEDGQEDAD NDVNKLLFSAVVQA
Subjt:  FVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5I9 Protein FAM33A

1.10e-107

100

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

A0A1S3BUQ8 Protein FAM33A

5.25e-99

94.3

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA +EFKQITEEWTTQVQSKF GED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

A0A5A7VFB8 Protein FAM33A

5.25e-99

94.3

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MGIDHHL QHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVL AKQDVID+ARTVLLGNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA
        SMGIPFVSDLDDPA +EFKQITEEWTTQVQSKF GED QEDADC++VNKLLFSAVVQA
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

A0A6J1CJF1 Protein FAM33A

1.04e-87

86.54

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MG+ HHL QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKLVSRIKKI+DDISTL+EQCRE+L+AKQDVID+ARTVL+GNRNMLQKMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVV
        SMGIP VSDLDD AF++FK+ITEEWTTQVQSK  G+DGQEDAD NDVNKLLFSAVV
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

1.32e-85

85.35

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Query:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA
        MG+DH L QHHQAADGL NLFTKAN DLSVVQYRLEKEFQQIYP+SANPMKL  RIKKI+DDISTLKEQCREVL+AKQDVID+ARTVL+GNRNM+ KMQA
Subjt:  MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQA

Query:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQ
        SMG PFVSD DDPAF +FKQITEEWTTQVQSK  GEDGQEDA+ +DVNKLLFSAVVQ
Subjt:  SMGIPFVSDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQ

SwissProt top hits

e value

%identity

Alignment

Q4R8E8 Spindle and kinetochore-associated protein 2

5.2e-04

26.89

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Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLD
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  ++    TL  + + V + +++   +    +    N++QK+Q        +DL+
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDLD

Query:  -DPAFSEFKQITEEWTTQV
          P   E K   E++ + +
Subjt:  -DPAFSEFKQITEEWTTQV

Q8WVK7 Spindle and kinetochore-associated protein 2

2.3e-04

31.82

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Query:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQ
        D L  +F KA  DL  +QYRLE E +  +P+SA   NP+ L+  +  I+    TL  + + V + +++   +    +    NM+QK+Q
Subjt:  DGLMNLFTKANLDLSVVQYRLEKEFQQIYPESA---NPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

1.1e-41

55.41

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Query:  DQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFV
        + HHQA D L+N+F++A+ DL+VV  +L+KEFQQ+YP +ANPMKL+ RIKK+Q+D++ LK QC ++L AKQD+ID+A+T L+GN N++QKM AS+G    
Subjt:  DQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFV

Query:  SDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAV
         D DD A ++F QI +EWT QV+S+  GE   EDAD  D+NK+LFSA+
Subjt:  SDLDDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAV

Sequences

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CDS sequence

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ATGGGGATCGATCATCATCTTGATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTCTCAGTAGTTCAGTACAGGCTCGAGAA
GGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAACATTGAAAGAGCAGTGTCGTGAAGTTT
TAATAGCTAAACAGGATGTAATCGATCAGGCCCGGACGGTTCTTCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCATACCCTTTGTTAGTGATCTC
GATGATCCTGCATTTTCGGAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTTCAGGGGAAGATGGCCAAGAGGACGCCGATTGCAATGATGT
CAACAAGTTGCTATTCTCGGCCGTGGTGCAGGCTTGA

mRNA sequence

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CGCGAAAACCCTAGCGGAGAGAGAGTATGGGGATCGATCATCATCTTGATCAACATCATCAAGCGGCCGATGGATTGATGAATTTGTTCACGAAGGCCAATCTCGATCTC
TCAGTAGTTCAGTACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGAAAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACAGGATGATATATCAAC
ATTGAAAGAGCAGTGTCGTGAAGTTTTAATAGCTAAACAGGATGTAATCGATCAGGCCCGGACGGTTCTTCTTGGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCA
TGGGCATACCCTTTGTTAGTGATCTCGATGATCCTGCATTTTCGGAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAATTTTCAGGGGAAGATGGC
CAAGAGGACGCCGATTGCAATGATGTCAACAAGTTGCTATTCTCGGCCGTGGTGCAGGCTTGATTTGTAGAGTTTCAGAAGCAAAATTAAGTTGCATGTATTCAGGTACC
TTAATATCAGTTTGGCAACGGTAAAAGATGTCAAGAGGTTAAATGAAACAGGTCTGTGAGCCGAATGAAATTTGAGTATGAACAATTTACTGAAAAGCACAGTTTTTACA
AAAATTTGGAAACAACATATTTGCATTAAAAAAACATCAAAAGCAGCATTATTAAGCTAAAACAATTAAAATTATGTAACAAAGC

Protein sequence

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MGIDHHLDQHHQAADGLMNLFTKANLDLSVVQYRLEKEFQQIYPESANPMKLVSRIKKIQDDISTLKEQCREVLIAKQDVIDQARTVLLGNRNMLQKMQASMGIPFVSDL
DDPAFSEFKQITEEWTTQVQSKFSGEDGQEDADCNDVNKLLFSAVVQA

CsGy4G024370 (gene) of Cucumber (Gy14) v2.1 genome