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CsGy5G002090 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G002090
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionarabinogalactan peptide 22-like
Genome locationGy14Chr5:1302948..1303371
RNA-Seq ExpressionCsGy5G002090
SyntenyCsGy5G002090
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579545.1 Arabinogalactan protein 16, partial [Cucurbita argyrosperma subsp. sororia]4.14e-2372.37Show/hide
Query:  MAVVACKVPFG---GILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS
        MAVVA K+PFG   G++FV+A++L     A AQSL+PAQPPA  DGTSIDQGIAYVLMLLALVLTYIIHSADL +S
Subjt:  MAVVACKVPFG---GILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS

KAG7017004.1 Arabinogalactan peptide 16 [Cucurbita argyrosperma subsp. argyrosperma]1.45e-2373.97Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS
        MAVVA K+PFG + F V  VL  +  A AQSL+PAQPPA  DGTSIDQGIAYVLMLLALVLTYIIHSADL +S
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS

XP_004143956.1 arabinogalactan protein 41 [Cucumis sativus]2.46e-40100Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

XP_008437371.1 PREDICTED: arabinogalactan peptide 22-like [Cucumis melo]1.09e-3490.54Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALVLTYIIHSAD YVSL
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

XP_022996281.1 arabinogalactan peptide 22-like [Cucurbita maxima]7.93e-1767.14Show/hide
Query:  KVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        KVP+G +L  VA VL  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLLAL+LTYIIH A+L +SL
Subjt:  KVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

TrEMBL top hitse value%identityAlignment
A0A0A0KK44 Uncharacterized protein1.19e-40100Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

A0A1S3ATI9 arabinogalactan peptide 22-like5.27e-3590.54Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALVLTYIIHSAD YVSL
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

A0A5D3C2F1 Arabinogalactan peptide 22-like5.27e-3590.54Show/hide
Query:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        MAVVACK+PF GILFVVALVLTRLS A AQSLSPAQPPAT DGTSIDQGIAY LMLLALVLTYIIHSAD YVSL
Subjt:  MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

A0A6J1CXM0 arabinogalactan peptide 22-like1.05e-1569.49Show/hide
Query:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS
        FV+   L   + A  +S+SPAQP AT DGTSIDQGIAY LMLLALVLTYIIHSADL +S
Subjt:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVS

A0A6J1K4A3 arabinogalactan peptide 22-like3.84e-1767.14Show/hide
Query:  KVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL
        KVP+G +L  VA VL  L  +SA   SLSPAQPP   DGTS+DQGIAYVLMLLAL+LTYIIH A+L +SL
Subjt:  KVPFGGILFVVALVLTRL--SSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 161.3e-0865.45Show/hide
Query:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD
        FV A++   LS A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD

Q8L9T8 Arabinogalactan protein 414.8e-0858.62Show/hide
Query:  FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH
        F G+  +V+++    L  A+AQS +PA P  T DGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH

Q9FK16 Arabinogalactan protein 227.6e-0650Show/hide
Query:  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH
        + + K P   +   V + +  L  A + S SPA P  T DGTSIDQGIAYVLM++AL LTY IH
Subjt:  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH

Q9M373 Arabinogalactan protein 201.8e-0758.62Show/hide
Query:  ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD
        ++ + A V   +S  A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 168.9e-1065.45Show/hide
Query:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD
        FV A++   LS A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  FVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD

AT3G61640.1 arabinogalactan protein 201.3e-0858.62Show/hide
Query:  ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD
        ++ + A V   +S  A AQSL+PA P  T DGTSIDQGIAY+LM++ALVLTY+IH  D
Subjt:  ILFVVALVLTRLSS-AYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSAD

AT5G24105.1 arabinogalactan protein 413.4e-0958.62Show/hide
Query:  FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH
        F G+  +V+++    L  A+AQS +PA P  T DGT+IDQGIAYVLML+ALVLTY+IH
Subjt:  FGGILFVVALVLT-RLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH

AT5G53250.1 arabinogalactan protein 225.4e-0750Show/hide
Query:  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH
        + + K P   +   V + +  L  A + S SPA P  T DGTSIDQGIAYVLM++AL LTY IH
Subjt:  VVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCGTTGCTTGTAAGGTCCCTTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTTGTCTCCGGCTCAACC
GCCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTACGTCAGTT
TATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCGTTGCTTGTAAGGTCCCTTTTGGTGGCATTTTGTTTGTTGTTGCTTTAGTTTTGACCAGGCTTTCCTCTGCTTATGCTCAATCGTTGTCTCCGGCTCAACC
GCCTGCTACTGGCGATGGAACAAGCATAGATCAGGGGATTGCCTATGTATTGATGTTGTTGGCGTTGGTGCTCACCTACATTATCCATTCAGCGGATCTTTACGTCAGTT
TATAAATTCCTTCACAAAACTAATTCAGATTCAGATTCAGATTTCAAATGGGGTTGAAGAATTTATGATAGGAAAATATGATCTCATGGACTAAACTTTA
Protein sequenceShow/hide protein sequence
MAVVACKVPFGGILFVVALVLTRLSSAYAQSLSPAQPPATGDGTSIDQGIAYVLMLLALVLTYIIHSADLYVSL