CuGenDBv2

Gene ID	CsGy5G002110
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ubiquitin-conjugating enzyme E2
Genome location	Gy14Chr5:1319986..1326237
RNA-Seq Expression	CsGy5G002110
Synteny	CsGy5G002110
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domains	IPR000608 - Ubiquitin-conjugating enzyme E2 IPR016135 - Ubiquitin-conjugating enzyme/RWD-like IPR023313 - Ubiquitin-conjugating enzyme, active site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0042700.1 ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa]

3.13e-71

95.5

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQFL
        KVV L I   L
Subjt:  KVVTLCINQFL

KJB39460.1 hypothetical protein B456_007G014500 [Gossypium raimondii]

3.54e-70

93.64

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQF
        KV+ L I+++
Subjt:  KVVTLCINQF

MBA0685307.1 hypothetical protein [Gossypium aridum]

3.78e-71

93.64

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQF
        KV+ L I+++
Subjt:  KVVTLCINQF

RCW18836.1 hypothetical protein GLYMA_19G253000v4 [Glycine max]

4.95e-70

98.08

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVT
        KV+T
Subjt:  KVVT

XP_021644853.1 SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis]

4.16e-70

95.28

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLC
        K++  C
Subjt:  KVVTLC

TrEMBL top hits

e value

%identity

Alignment

A0A0D2T778 UBC core domain-containing protein

1.72e-70

93.64

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQF
        KV+ L I+++
Subjt:  KVVTLCINQF

A0A368UHD6 UBC core domain-containing protein

2.40e-70

98.08

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVT
        KV+T
Subjt:  KVVT

A0A5A7TH72 Ubiquitin-conjugating enzyme E2-17 kDa

1.52e-71

95.5

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQFL
        KVV L I   L
Subjt:  KVVTLCINQFL

A0A6J1K529 ubiquitin-conjugating enzyme E2-17 kDa-like

2.43e-70

99.03

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

A0A7J8XDG8 UBC core domain-containing protein (Fragment)

1.83e-71

93.64

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVVTLCINQF
        KV+ L I+++
Subjt:  KVVTLCINQF

SwissProt top hits

e value

%identity

Alignment

P35131 Ubiquitin-conjugating enzyme E2 8

4.9e-54

95.15

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

P35132 SUMO-conjugating enzyme UBC9

1.7e-54

96.12

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

P35133 Ubiquitin-conjugating enzyme E2 10

2.2e-54

96.12

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Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

P35135 Ubiquitin-conjugating enzyme E2-17 kDa

5.7e-55

97.09

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

Q94F47 Ubiquitin-conjugating enzyme E2 28

2.2e-54

95.15

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

Arabidopsis top hits

e value

%identity

Alignment

AT1G64230.1 ubiquitin-conjugating enzyme 28

1.5e-55

95.15

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

AT1G64230.2 ubiquitin-conjugating enzyme 28

1.5e-55

95.15

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

AT4G27960.1 ubiquitin conjugating enzyme 9

1.2e-55

96.12

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

AT4G27960.2 ubiquitin conjugating enzyme 9

1.2e-55

96.12

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

AT5G53300.1 ubiquitin-conjugating enzyme 10

1.5e-55

96.12

Show/hide

Query:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
        MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS
Subjt:  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTIS

Query:  KVV
        KV+
Subjt:  KVV

Sequences

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CDS sequence

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ATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAAT
TATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCT
TTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTT
TTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAG

mRNA sequence

Show/hide mRNA sequence

CCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGAGCTTCCACTCTTTTGGATTTTGGTTATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAA
AGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTG
TCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATA
CTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGA
TATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAGGGAAGAGTGTCTAGACTGCTTAACAAAACTTTTAAAATAATTTTCCTCGATAAACTAAAGG
GGGCTGGTGCATGAAATCCTTGGATGGTACAGGGAATAAATTATAGAGAAAAAAATATCAAGTGGATGCTATGGATGAATGGCCCAAGCATGTCAATTAATTATCATTTT
CATGTTGGTGCCTACAGGGAATATGAAATCTAATTACCTCTTTACTTCATGCATTATGGCCTTCCATTAGACTATTACTAGTTTTGTTCATAGTGGTTTCGCTTTGTTCT
GTAAACTTAAAGACTTGTTTTCTTCATCCATTCAATCCAACACATTGATTATACATATACTTGGTAACATGTGTTTGTACTCCAGGTGTTACTTTCGATCTGCTCGCTGC
TAACGGACCCAAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTACAAGACTGACAGAAGCAAGTACGAAGCAACTGCCAGAAGCTGGACCCAGAAATATGCT
ATGGGTTAGTGTTTGCTGCTTTGCTCTTAGTGTTGTTTAGAGGAGGGGCGGCTTCTTTCCCAAATGGCCTTTTACTTGGAATTATATCTTTGAATCTGCTTCTTCTTTTA
TCCAATGGGGTTTAGGTATGTTTCCCTCCTGAAAAAGATAAAAACTCTGCCTGTTCTAAAACTTGTTTGTATGGATAAACAAATTTATCTTTAATCGTGAGAGTATTCCA
ATAAAAACTTGGACCTACCCTTCATGCTAAAATCTATGCTCAATTATGTACTAATGCCTCTCAAGTGAGCCTCTTGGATTTGGAAAGCTTGGCTAAACACACAACCAATG
TCTTTCTTATGTTTGTGTCGGAGAAAATTTCTAACACTAAATCAGTATCATACTTCATTTCATTTCTTCACACTATATATTTTTATTTATAAATATTTATGGAGTCAACA
TTAATGTTCGTAGATCTTGAACTATACATGTATCGGCAGACAATAAATTGTAGCATATATAGAAAATTTTGATTTGTGTGGATGTGTGTTTGGTGATTTAACCGGGGAGA
GGTCTGTAAGAGGCTGACTATTTTCTTAATTGATAAAAACGTTAGTGTGAAATTTTTAGGTAGTTTGATCATTTGGATTTTAGTTTTTCTTTTTTCATAGCCTTTTAAAC
TTCATTTGGTATCAAGTTGAATTTTGTTTGGTTCTTTATTTTTCTGCTATCTGAAATCAACTTTACTCTCATTTTCTAACCTGTAGTTTGTTAATTTATTTCATTTATTT
CTTAAATATGTTTATTCAAATTTAGTATCACATGAAGGTCAAAGGTTCGTGGGTTTTTTTAGAAATAAAAAAGTTAGAGACCCATTTTGAAATTTACCGTCTTAAATCCT
GTTTTTCCTTTTTCCTTTTTAATTTATTATGAATTCAATGTTCTTTAAGGAATGGGAAAGAAATTGTTAGAAAACAAAAAAATGATTCAAATAGATATCCACAAGCTCAA
AGAAAAACTACTCTCATCCATGTGTTCTCTAATAATTTCTAAATTCATTTCAATAATTGAAAAATAAAAGTTTCTACTATG

Protein sequence

Show/hide protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF
LRGGKYLLLFDSYFDILIKILCFFFYFLLI

CsGy5G002110 (gene) of Cucumber (Gy14) v2.1 genome