; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G002960 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G002960
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionF-box/LRR-repeat protein
Genome locationGy14Chr5:1928626..1929127
RNA-Seq ExpressionCsGy5G002960
SyntenyCsGy5G002960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042782.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]3.79e-4186.52Show/hide
Query:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILLTTT PLHAARR P SAPQPENDSL   PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6579492.1 hypothetical protein SDJN03_23940, partial [Cucurbita argyrosperma subsp. sororia]7.86e-2766.29Show/hide
Query:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQN  P  SL LFLF+ILLTTT PL A RR  T+   PENDSL   PP T++FSF QPP  VE+Q  S+NY VS RKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

KAG6606114.1 Methyl-CpG-binding domain-containing protein 13, partial [Cucurbita argyrosperma subsp. sororia]3.61e-1155.95Show/hide
Query:  MASQNSIPPNSLFLFLFMI-LLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAG
        MAS N   PNS FL LF++ +L TT  L AA      A QP NDSL   PPT+STFS  + P AVED I  +N+ VSLRKVPAG
Subjt:  MASQNSIPPNSLFLFLFMI-LLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAG

KGN50125.1 hypothetical protein Csa_000058 [Cucumis sativus]1.66e-56100Show/hide
Query:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

KJB39643.1 hypothetical protein B456_007G023000 [Gossypium raimondii]3.43e-0434.94Show/hide
Query:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        N  F+F+F  ++ +T  L + RR       PE  +      +T+ F F     P  +V ++I+   Y VS R VP GPNPLHN
Subjt:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KKA9 Uncharacterized protein8.05e-57100Show/hide
Query:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

A0A0D2QKA3 Uncharacterized protein1.66e-0434.94Show/hide
Query:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        N  F+F+F  ++ +T  L + RR       PE  +      +T+ F F     P  +V ++I+   Y VS R VP GPNPLHN
Subjt:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

A0A5A7THA6 F-box/LRR-repeat protein1.83e-4186.52Show/hide
Query:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        MASQNS PP SLFLFLF+ILLTTT PLHAARR P SAPQPENDSL   PPTT+TFSF QPPAAV+DQITSRNYGVSLRKVPAGPNPLHN
Subjt:  MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

A0A5D2IGZ4 Uncharacterized protein2.34e-0434.94Show/hide
Query:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        N  F+F+F  ++ +T  L + RR       PE  +      +T+ F F     P  +V ++I    Y VS R VP GPNPLHN
Subjt:  NSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFT---QPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

A0A6N2KRL1 Uncharacterized protein5.16e-0533.33Show/hide
Query:  PNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN
        PN    FLF++++   + L + R    +     N ++S H   +  F    P  + +D+I    YG S RK P GPNPLHN
Subjt:  PNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAAAACTCCATTCCTCCTAATTCTCTCTTCCTCTTCCTCTTCATGATTCTCCTCACCACCACCACCCCTCTCCACGCCGCCCGCCGTCCACCCACCTCCGC
CCCACAACCGGAAAACGATTCTCTCAGTCTCCACCCACCCACCACCTCAACATTTTCATTCACGCAGCCGCCGGCCGCCGTGGAAGACCAAATCACTTCCCGAAACTACG
GCGTTTCACTCCGCAAAGTCCCCGCCGGTCCCAACCCACTTCATAACTAA
mRNA sequenceShow/hide mRNA sequence
ATTCCTTCACTTCTTCTTCTAATTCACTCTCAAAAACCTCTCTCTCTCCTCCATTGAAAAACCTTAATTAGAAACACCTCTCTCAAATAAAAATGGCTTCTCAAAACTCC
ATTCCTCCTAATTCTCTCTTCCTCTTCCTCTTCATGATTCTCCTCACCACCACCACCCCTCTCCACGCCGCCCGCCGTCCACCCACCTCCGCCCCACAACCGGAAAACGA
TTCTCTCAGTCTCCACCCACCCACCACCTCAACATTTTCATTCACGCAGCCGCCGGCCGCCGTGGAAGACCAAATCACTTCCCGAAACTACGGCGTTTCACTCCGCAAAG
TCCCCGCCGGTCCCAACCCACTTCATAACTAATCGCATCAACCTCCGAAGATCTTAAGGGAAAAATTATTCAATGTGAAGGTCTCTCGTAACAATTCTTCCATACAGGTT
CGAAATACAAATTTTCGAATTCTCAGTCACATTAATTATTTTAATTAGATTTTTTTTGCAGT
Protein sequenceShow/hide protein sequence
MASQNSIPPNSLFLFLFMILLTTTTPLHAARRPPTSAPQPENDSLSLHPPTTSTFSFTQPPAAVEDQITSRNYGVSLRKVPAGPNPLHN