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CsGy5G004330 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G004330
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description3-isopropylmalate dehydratase small subunit 3-like
Genome locationGy14Chr5:2871858..2872088
RNA-Seq ExpressionCsGy5G004330
SyntenyCsGy5G004330
Gene Ontology termsGO:0043436 - oxoacid metabolic process (biological process)
GO:0016836 - hydro-lyase activity (molecular function)
InterPro domainsIPR000573 - Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
IPR015928 - Aconitase/3-isopropylmalate dehydratase, swivel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016880.1 3-isopropylmalate dehydratase small subunit 3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.08e-2484.38Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESE RI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

XP_004152394.1 3-isopropylmalate dehydratase small subunit 3 [Cucumis sativus]1.17e-2585.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

XP_008437054.1 PREDICTED: 3-isopropylmalate dehydratase small subunit 3-like [Cucumis melo]1.30e-2585.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

XP_022972989.1 3-isopropylmalate dehydratase small subunit 3-like [Cucurbita maxima]1.08e-2484.38Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESE RI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

XP_038876127.1 3-isopropylmalate dehydratase small subunit 1-like [Benincasa hispida]2.50e-2585.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

TrEMBL top hitse value%identityAlignment
A0A0A0KPA8 Aconitase_C domain-containing protein6.02e-4497.37Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRISRILKLNNNNNN
        MKTKYSIIIVGDNFGCGSSREHVPV LGVSGAVAVVAESYAHIFLTANS+ATREIYPLESETRISRILKLNNNNNN
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRISRILKLNNNNNN

A0A0A0KPB2 Aconitase_C domain-containing protein5.67e-2685.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

A0A1S3AT32 3-isopropylmalate dehydratase small subunit 3-like6.30e-2685.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

A0A5A7T900 3-isopropylmalate dehydratase small subunit 3-like6.30e-2685.94Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESETRI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

A0A6J1ID74 3-isopropylmalate dehydratase small subunit 3-like5.24e-2584.38Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII GDNFGCGSSREH PVALG SGAVAVVAESYA IF   NS+AT EIYPLESE RI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

SwissProt top hitse value%identityAlignment
A8ETJ8 3-isopropylmalate dehydratase small subunit1.9e-0763.41Show/hide
Query:  KYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIF
        K  II+ G+NFGCGSSREH P+AL  +G  AVVA S+A IF
Subjt:  KYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIF

Q7M887 3-isopropylmalate dehydratase small subunit8.4e-0861.9Show/hide
Query:  TKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIF
        TK   I+ G+NFGCGSSREH PVAL  +G  AV+A+S+A IF
Subjt:  TKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIF

Q9LYT7 3-isopropylmalate dehydratase small subunit 35.2e-1873.44Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MK+KYS+II GDNFGCGSSREH PV LG +GA AVVAESYA IF   N +AT EI+PLESE RI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

Q9ZW84 3-isopropylmalate dehydratase small subunit 25.8e-1768.25Show/hide
Query:  KTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        ++KYSIII G+NFGCGSSREH PV LG +GA A+VAESYA IF   NS+AT E++PLESE R+
Subjt:  KTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

Q9ZW85 3-isopropylmalate dehydratase small subunit 13.1e-1871.88Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII G+NFGCGSSREH PV LG +GA AVVA+SYA IF   NS+AT E+YPL+SE R+
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

Arabidopsis top hitse value%identityAlignment
AT2G43090.1 Aconitase/3-isopropylmalate dehydratase protein2.2e-1971.88Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MKTKYSIII G+NFGCGSSREH PV LG +GA AVVA+SYA IF   NS+AT E+YPL+SE R+
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

AT2G43090.2 Aconitase/3-isopropylmalate dehydratase protein4.0e-0562.16Show/hide
Query:  GVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        G +GA AVVA+SYA IF   NS+AT E+YPL+SE R+
Subjt:  GVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

AT2G43100.1 isopropylmalate isomerase 24.1e-1868.25Show/hide
Query:  KTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        ++KYSIII G+NFGCGSSREH PV LG +GA A+VAESYA IF   NS+AT E++PLESE R+
Subjt:  KTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI

AT3G58990.1 isopropylmalate isomerase 13.7e-1973.44Show/hide
Query:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI
        MK+KYS+II GDNFGCGSSREH PV LG +GA AVVAESYA IF   N +AT EI+PLESE RI
Subjt:  MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACCAAATATTCCATCATAATTGTCGGCGACAACTTCGGTTGTGGTTCTTCACGGGAGCACGTGCCGGTTGCATTGGGAGTGTCCGGCGCCGTGGCGGTAGTGGC
TGAATCTTATGCGCATATTTTCCTCACAGCAAACTCCATGGCAACCAGAGAGATTTATCCATTGGAATCAGAGACTAGGATTTCACGTATTTTAAAATTAAACAATAATA
ATAATAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACCAAATATTCCATCATAATTGTCGGCGACAACTTCGGTTGTGGTTCTTCACGGGAGCACGTGCCGGTTGCATTGGGAGTGTCCGGCGCCGTGGCGGTAGTGGC
TGAATCTTATGCGCATATTTTCCTCACAGCAAACTCCATGGCAACCAGAGAGATTTATCCATTGGAATCAGAGACTAGGATTTCACGTATTTTAAAATTAAACAATAATA
ATAATAACTAG
Protein sequenceShow/hide protein sequence
MKTKYSIIIVGDNFGCGSSREHVPVALGVSGAVAVVAESYAHIFLTANSMATREIYPLESETRISRILKLNNNNNN