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CsGy5G004660 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G004660
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description60S ribosomal protein L36
Genome locationGy14Chr5:3040469..3042618
RNA-Seq ExpressionCsGy5G004660
SyntenyCsGy5G004660
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013242.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]7.89e-6599.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

KAG7014765.1 60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.26e-6498.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

XP_004140771.1 60S ribosomal protein L36-2 [Cucumis sativus]1.87e-65100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

XP_022923053.1 60S ribosomal protein L36-2-like isoform X1 [Cucurbita moschata]2.19e-6498.18Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVR+LIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

XP_022945858.1 60S ribosomal protein L36-2-like [Cucurbita moschata]7.64e-6599.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L6L0 60S ribosomal protein L369.08e-66100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

A0A1S3AYD7 60S ribosomal protein L369.08e-66100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

A0A5A7UN62 60S ribosomal protein L369.08e-66100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

A0A6J1H2C5 60S ribosomal protein L363.70e-6599.09Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGG EKKK
Subjt:  RAGGGAEKKK

E5GCU5 60S ribosomal protein L369.08e-66100Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGGAEKKK
        RAGGGAEKKK
Subjt:  RAGGGAEKKK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-12.4e-4083.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

P52866 60S ribosomal protein L362.2e-3382.42Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE
        MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGK+SKR  FVR+LIREVAGF PYEKRITELLKVGKDKRALKV + K+G H +  K+ E
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKRE

Q9LRB8 60S ribosomal protein L362.8e-2870.83Show/hide
Query:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE
        VGLNKGH VTKK   PRPS RKG  S+RV  VR+++REVAG+APYE+R+ ELLKVGKDKRALK+ KRKLGTH R KKKREEM+ VLRKM+A    E
Subjt:  VGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAE

Q9LZ57 60S ribosomal protein L36-39.1e-4082.69Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GA
        TGLFVGLNKGH+VTK+E  PRP++RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+GG GA
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGG-GA

Query:  EKKK
         +KK
Subjt:  EKKK

Q9M352 60S ribosomal protein L36-21.3e-4180.36Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.7e-4183.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

AT2G37600.2 Ribosomal protein L36e family protein1.7e-4183.81Show/hide
Query:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--
        TGLFVGLNKGH+VT++ELAPRP+ RKGK+SKR +F+R LIREVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKMR+ GG  
Subjt:  TGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGG--

Query:  -AEKK
         AEKK
Subjt:  -AEKK

AT3G53740.2 Ribosomal protein L36e family protein9.1e-4380.36Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

AT3G53740.3 Ribosomal protein L36e family protein9.1e-4380.36Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK

AT3G53740.4 Ribosomal protein L36e family protein9.1e-4380.36Show/hide
Query:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM
        M   Q  TGLFVGLNKGH+VT++ELAPRP  RKGK+SKR +F+R+LI+EVAG APYEKRITELLKVGKDKRALKVAKRKLGTHKRAK+KREEMSSVLRKM
Subjt:  MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKM

Query:  RAGGG--AEKKK
        R+GGG   EKKK
Subjt:  RAGGG--AEKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGAAACAGCCGAATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAAAATCAAG
TAAAAGAGTCCTCTTTGTCCGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGA
AGGTAGCCAAAAGAAAGCTTGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGCTGAGAAGAAGAAG
TGA
mRNA sequenceShow/hide mRNA sequence
GTCAGATTCATCGAAACAGGTGAGAATCCGTTGCTTTTAGAGTCGTTGTTCTTTGGTTAGTTATCAATTTTGCAATCGTTGTTCATTGGTAATGGCTCCGAAACAGCCGA
ATACTGGCCTTTTTGTTGGTCTGAACAAGGGCCACATTGTCACCAAGAAGGAGTTGGCCCCACGGCCCTCAGATCGTAAAGGAAAATCAAGTAAAAGAGTCCTCTTTGTC
CGGAGTTTGATCCGGGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAGGACAAGCGTGCTCTGAAGGTAGCCAAAAGAAAGCT
TGGAACCCACAAGAGAGCGAAGAAGAAGAGAGAGGAAATGTCCAGTGTTCTAAGAAAGATGAGGGCCGGTGGAGGTGCTGAGAAGAAGAAGTGAGATCTACACTTGCTCA
TTCATTCAAAGTCTTGCACTGTGGCTACTCATTTTTGTTTGTTTTAGGTTTCAATTTGTCAGAGACTGAGACCGAGCTGGAGCTTATAATCAATTTCAGTTTTGTGATCT
TTGAACTTGTTTTACTAACACCCAATTTTGTTATGGCTCCGTTTGTTTCAATGATGCATTGTGGTTTGATGAATTAATTAGCCAGTCGTGTCATTTTTTGAGTTTGTGGT
TTATGTCTTCCCCTTGATTCATCAGTTTATTCTATATTGGGTTTTAAAATATTTGAGAATTTTAAGTATTTTTATGAACTTTATATACTTACATAACAAAATCTTTCTAG
ATATGTTCATTCATAGGGTTGGAACATTTTGTCAACATTCGTATTTAAAACTTTTGATAATAATAGAAGCATATTTGAAAGTGATTTTGTTGGAGTTAGAAGTTATTTTG
AAATAGTAAAGTGAATCAAAGCATTTATAAACAGAAAGTATTTGATAGATAGTAATTGATAAAGACTAACATGTTTAGAATTTTTGTTGTTTCATTTATATCATATATTT
TAC
Protein sequenceShow/hide protein sequence
MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK