; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G006240 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G006240
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationGy14Chr5:4172581..4175282
RNA-Seq ExpressionCsGy5G006240
SyntenyCsGy5G006240
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034049.1 putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]3.67e-18096.2Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF
        A MVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF

XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]1.76e-188100Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

XP_008445852.2 PREDICTED: probable RNA-binding protein ARP1 isoform X1 [Cucumis melo]6.55e-17996.55Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
        A MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

XP_008445853.2 PREDICTED: probable RNA-binding protein ARP1 isoform X2 [Cucumis melo]5.19e-17896.54Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
        A MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]1.39e-187100Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein8.50e-189100Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
        AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X22.51e-17896.54Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
        A MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X13.17e-17996.55Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
        A MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X11.78e-18096.2Show/hide
Query:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTMMTTTTN+N   TNAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ
        ASLGARRGGSRSASATPPQAPQPGSN GGPRTT+AATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGY+NGHYTQMYPGQ
Subjt:  ASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQ

Query:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF
        A MVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF
Subjt:  A-MVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPF

A0A6J1CCJ5 probable RNA-binding protein ARP11.23e-15287.3Show/hide
Query:  NSSTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS
        N+S NAGL FGDTTLTKVFVGGLAWETPKEAMRDHF KFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACED+APIINGRRANCNLASLGARRG  
Subjt:  NSSTNAGL-FGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGS

Query:  RSASATPPQAPQ-PGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNG--HYTQMYPGQAMVGANT
         +++ATPPQAP  PGSN GG   +++A +P NHVQWYYPAGT PTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKL YMNG  HY+Q+YPGQAMVGANT
Subjt:  RSASATPPQAPQ-PGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNG--HYTQMYPGQAMVGANT

Query:  LMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP
        LMPMYPLYHYHQSHAMGMPAHIFPPSPT AGPFAAVPPTSIMSKP +VGPNP
Subjt:  LMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNP

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 381.2e-2156.47Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q5ZMA3 RNA-binding protein 244.7e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q6GQD3 RNA-binding protein 24-A4.7e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q9I8B3 RNA-binding protein 24-B4.7e-2150.49Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP
        DTT TK+FVGGL + T   ++R +F  FG+I EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+           P+  
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAP

Query:  QPG
        QPG
Subjt:  QPG

Q9M1S3 Probable RNA-binding protein ARP19.0e-5752.42Show/hide
Query:  TTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        TT+NN N     G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG 
Subjt:  TTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP
        R    +S + T PQ         GP+  + AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P
Subjt:  RRGGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP

Query:  ------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
                          G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  ------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-3540.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P YP
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP

Query:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPFL
            H       P   F    ++  P    PPT  M +  T  P   P +
Subjt:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPFL

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein3.4e-3541.39Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P YP
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMYP

Query:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP
            H       P   F    ++  P    PPT  M +   V P
Subjt:  LYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.3e-3641.7Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA
        GDTT TKVFVGGLAWET KE M+ HF +FGEILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +R        + P  
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQA

Query:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY-
        P  G   GG               +  P    P  F H PH P+  +GYSP SP Y +   +     G  +G    +Y       G     A +  P Y 
Subjt:  PQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSP-SPTYIATDISYNHKLGYMNGHYTQMY------PGQAMVGANTLMPMY-

Query:  --------------PLYHYHQSHAMGMPAHIFPPS
                      P YH+  S+    P H  PP+
Subjt:  --------------PLYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.4e-5852.42Show/hide
Query:  TTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        TT+NN N     G FGDT LTKVFVGGLAW+T KEAM DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG 
Subjt:  TTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP
        R    +S + T PQ         GP+  + AT P  GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P
Subjt:  RRGGSRSASATPPQAPQPGSNAGGPRTTSAATAP--GNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP

Query:  ------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
                          G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  ------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.9e-4448.05Show/hide
Query:  MRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGN
        M DHF K+G+ILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                     GN
Subjt:  MRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGN

Query:  HVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHY
        H QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N K+G     YMNG+Y QM P                  G+ MVG A+ ++P Y +Y Y
Subjt:  HVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLG-----YMNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHY

Query:  HQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS
        HQS A+G       P P+ + P + + PP S
Subjt:  HQSHAMGMPAHIFPPSPTTAGPFA-AVPPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATGATGACCACCACCACCAACAACAACAACAGTAGTACCAATGCAGGTTTGTTCGGCGATACCACTTTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGG
GAAACACCAAAGGAAGCCATGAGAGATCACTTCCACAAGTTCGGTGAAATTCTCGAAGCGGTTATCATCTCTGATAAACTCACCGGCAGATCCAAGGGATATGGA
TTCGTTACATTCAAAGACGCGGAATCCGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTCGCTTCACTTGGAGCT
CGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGATCCAACGCTGGAGGACCGAGAACGACATCAGCAGCAACCGCACCGGGA
AATCATGTGCAGTGGTATTACCCGGCGGGGACTCATCCAACGCCGTTTCATCATCAGCCTCATCAACCCGTCCCTTTTTATGGATATTCCCCAAGCCCCACATAC
ATCGCAACCGATATCAGTTACAACCACAAATTGGGGTATATGAACGGGCACTACACACAAATGTATCCAGGGCAGGCTATGGTAGGAGCGAACACATTGATGCCA
ATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCCACGACGGCGGGCCCATTTGCCGCTGTCCCACCC
ACTTCCATTATGTCCAAACCAACTACCGTTGGTCCCAACCCAGGTCCGTTTTTACTTAACCCTTCTCCATTATCTTAA
mRNA sequenceShow/hide mRNA sequence
GATTAGAAAAGAAAAAAATGGTTGTGTGTGTGTGTTCACGTTGATGATAGATAGCCTTGAGCAATTGCCTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCCA
TTTCTTTATTTCCATACCACTCTGTTTCTTCACAACACTTCTCTTTATTTAACCTTCTTCTTCTCTTCATCACCACCATTTTTCCTCCCATTTTAACTTAACTAC
TTCTAATTACTTCCTCATTAGCTGTTTTGTTCCATGACGATGATGACCACCACCACCAACAACAACAACAGTAGTACCAATGCAGGTTTGTTCGGCGATACCACT
TTGACGAAAGTCTTCGTTGGTGGGTTAGCTTGGGAAACACCAAAGGAAGCCATGAGAGATCACTTCCACAAGTTCGGTGAAATTCTCGAAGCGGTTATCATCTCT
GATAAACTCACCGGCAGATCCAAGGGATATGGATTCGTTACATTCAAAGACGCGGAATCCGCGAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGT
CGAGCTAACTGTAATCTCGCTTCACTTGGAGCTCGGCGCGGCGGTTCTAGGTCGGCTTCCGCTACTCCTCCTCAAGCTCCTCAACCAGGATCCAACGCTGGAGGA
CCGAGAACGACATCAGCAGCAACCGCACCGGGAAATCATGTGCAGTGGTATTACCCGGCGGGGACTCATCCAACGCCGTTTCATCATCAGCCTCATCAACCCGTC
CCTTTTTATGGATATTCCCCAAGCCCCACATACATCGCAACCGATATCAGTTACAACCACAAATTGGGGTATATGAACGGGCACTACACACAAATGTATCCAGGG
CAGGCTATGGTAGGAGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCCATGGGGATGCCGGCCCACATCTTCCCTCCTAGTCCC
ACGACGGCGGGCCCATTTGCCGCTGTCCCACCCACTTCCATTATGTCCAAACCAACTACCGTTGGTCCCAACCCAGGTCCGTTTTTACTTAACCCTTCTCCATTA
TCTTAACTCAAGTTTGTAGATTATTGTGTTATTTTGACGACGGTTGGCGTTTGTTTGCACATTGTTTTTGGTTACTGCATGTGGTAAAAACGAAAACAAAAACAA
AAAAAAAAACTCGAAAAATGGTCAATAGTCAAACGTTATTAACAAGAAGAAGAGAAAGAAAGAACGAAAGAAAAAAAAAAGATGAGGCCGGGAGGGAGGCAAAAA
ACAACAGATCAGAGTGTGGTCGTTGTTCACGTGAAAGGGTGATTTAGTAAAAGCGTCTTCTCCGTCAGTGCCAACTGGCGTGGCTGGGTCCCACGTGGCCAGCTT
GATTCGCCGGTCGTGCGTTGGTCTAGCTGTCCCTACTCCAATTCCTCTTAATAATCCTTAACTTGAAGGACTCTTTTGCAATATCAACTACTTTTCTAGACCATT
TTTTTTCAAAAACTAAACCACCCATAGTAATATTGGTGCGTACAACTGTTTAGATGATGAGGTGAAGTGTTTGTAAATTTTGTATACAAGAGCCTTTATATTTCT
TGTTGATCAGCATATTATTGGTTGTATTATCAGTTTTTGTTTTAAATGAAGTGTATAATTCTGGAGTAAGAAATAATGTTGATCATTAAACTGATATTACAAAGA
AACAGTTTGCTTGGTTGTGGAATAAATAGGTACAGTTGGAGGCAGGGGATGAAGAAGATGCTGATGATGCATGGTAAAAGAAGAGCAGATAGAAGAATTTTAAGT
ATAAAAATGGGGAGAGGGCAGGCTAAGAGGGACTATTTTTTTTAATTTATTTTTTTCTTTTTTAAATTTTTAATCAGAACATCTCATTCTCTTAGTACATGGCAG
GCAAGAAAGAAAGAAGAACAAAAAAAAAAGAAAAGAAAAATAACAGAGACAATGTGAAGCTGGTTGGGGGGGCTGCTCAGAACTACATTATTTTTAGGCTGATCT
GTTGTAGCTCTTTATTTATTTCTTTCTTCTTTTAATTATAAAAAACTAATTTTATTGTTTTTTTCCCTCTCCATTCTTCTCTCCTTCCCTATCATTTCCACAAAC
CAACACCTCTCTATATTACTTTCTATCTCGGTACTTTCGACCACCCTAAAAATGTTCATTTTCAGCCATAATGGCATTTATATGTGCAAAACACTGCTTGTGGTT
TATATTTTTTCACTGCTAAAAGTTTTTATTTTCATAATCATACAATGATTCGTTTTGAAGAAAGGAATTAAAATGGCTATTTCTTTTA
Protein sequenceShow/hide protein sequence
MTMMTTTTNNNNSSTNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
RRGGSRSASATPPQAPQPGSNAGGPRTTSAATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYTQMYPGQAMVGANTLMP
MYPLYHYHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMSKPTTVGPNPGPFLLNPSPLS