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CsGy5G007498 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G007498
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUBC core domain-containing protein
Genome locationGy14Chr5:5254116..5255015
RNA-Seq ExpressionCsGy5G007498
SyntenyCsGy5G007498
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0061631 - ubiquitin conjugating enzyme activity (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1203779.1 putative ubiquitin-conjugating enzyme E2 18 [Morella rubra]7.43e-1689.74Show/hide
Query:  LRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        LRWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  LRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

KAE8648008.1 hypothetical protein Csa_021407 [Cucumis sativus]2.03e-4398.63Show/hide
Query:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV
        MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCI LLCIIISIAMVTFV
Subjt:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV

KAG0496935.1 hypothetical protein HPP92_001626 [Vanilla planifolia]2.04e-1677.36Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMV
        RW+IEV GA GTL ANETYQLQVDFPEHYPME PQVI F    LCI+I IAMV
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMV

XP_021907893.1 probable ubiquitin-conjugating enzyme E2 16 isoform X5 [Carica papaya]1.71e-1589.47Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

XP_031741252.1 pentatricopeptide repeat-containing protein At2g03380, mitochondrial-like [Cucumis sativus]3.30e-4098.63Show/hide
Query:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV
        MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCI LLCIIISIAMVTFV
Subjt:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ5 UBC core domain-containing protein2.75e-3895.89Show/hide
Query:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV
        MGAENILRSSSSYIGKLRWVIEVNGA GTL ANETYQLQVDFPEHYPMETPQVIYFCI LLCIIISIAMVTFV
Subjt:  MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV

A0A251R943 UBC core domain-containing protein1.34e-1589.47Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

A0A5E4F468 PREDICTED: ubiquitin-conjugating1.34e-1589.47Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

A0A6A1UTN9 Putative ubiquitin-conjugating enzyme E2 183.59e-1689.74Show/hide
Query:  LRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        LRWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  LRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

A0A7N2KT02 UBC core domain-containing protein8.70e-1689.47Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RWVIEVNGA GTL ANETYQLQVDFPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

SwissProt top hitse value%identityAlignment
O23239 Probable ubiquitin-conjugating enzyme E2 177.0e-1278.95Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

P42743 Ubiquitin-conjugating enzyme 154.6e-1173.68Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Q9FMM0 Probable ubiquitin-conjugating enzyme E2 184.6e-1176.32Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Q9FWT2 Probable ubiquitin-conjugating enzyme E2 164.1e-1281.58Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

Arabidopsis top hitse value%identityAlignment
AT1G45050.1 Ubiquitin-conjugating enzyme family protein3.2e-1273.68Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +W I+V GA GTL ANETYQLQV+FPEHYPME PQV++
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT1G75440.1 ubiquitin-conjugating enzyme 162.9e-1381.58Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV GA GTL AN+TYQLQVDFPEHYPME+PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT4G36410.1 ubiquitin-conjugating enzyme 175.0e-1378.95Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        RW+IEV+G  GTL ANETYQLQV+FPEHYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY

AT5G42990.1 ubiquitin-conjugating enzyme 183.2e-1276.32Show/hide
Query:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY
        +WVIEV GA GTL ANETY LQV+FP+HYPME PQVI+
Subjt:  RWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATTGGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCA
GCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCCACAGGTTATATATTTCTGCATCCACCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCT
AG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCCGAAAACATTTTGAGATCAAGTAGCTCTTACATTGGAAAACTGAGGTGGGTGATTGAAGTCAACGGTGCCCTGGGAACTCTCTGTGCTAATGAAACCTATCA
GCTTCAGGTCGACTTTCCTGAGCATTACCCAATGGAAACCCCACAGGTTATATATTTCTGCATCCACCTCCTCTGCATCATCATATCTATAGCAATGGTCACATTTGTCT
AG
Protein sequenceShow/hide protein sequence
MGAENILRSSSSYIGKLRWVIEVNGALGTLCANETYQLQVDFPEHYPMETPQVIYFCIHLLCIIISIAMVTFV