; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G007930 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G007930
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionElf4 domain-containing protein
Genome locationGy14Chr5:5703704..5704093
RNA-Seq ExpressionCsGy5G007930
SyntenyCsGy5G007930
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0009649 - entrainment of circadian clock (biological process)
GO:0009909 - regulation of flower development (biological process)
GO:0010017 - red or far-red light signaling pathway (biological process)
GO:0010114 - response to red light (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0048573 - photoperiodism, flowering (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0042803 - protein homodimerization activity (molecular function)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031907.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]2.56e-8196.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

KAE8648025.1 hypothetical protein Csa_005775 [Cucumis sativus]3.32e-77100Show/hide
Query:  MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
        MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA
Subjt:  MKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTA

Query:  FHNHKPRTGKRGTTNPDA
        FHNHKPRTGKRGTTNPDA
Subjt:  FHNHKPRTGKRGTTNPDA

XP_004149248.1 protein EARLY FLOWERING 4 [Cucumis sativus]2.77e-85100Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

XP_008463236.2 PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]2.59e-8096.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

XP_038892867.1 protein EARLY FLOWERING 4-like [Benincasa hispida]6.68e-7390.84Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTT-SDDAPHHA-FPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
        MADNNPRRKSKMKPSATTTTTTTTTT SDD PH   FPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTT-SDDAPHHA-FPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVV

Query:  SMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        SMYSDFSSDFS+AF NHKPR GKRG+ NP+A
Subjt:  SMYSDFSSDFSTAFHNHKPRTGKRGTTNPDA

TrEMBL top hitse value%identityAlignment
A0A0A0KM35 Elf4 domain-containing protein1.34e-85100Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

A0A1S3CIT1 uncharacterized protein LOC1035014401.26e-8096.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

A0A5A7SR92 Protein EARLY FLOWERING 41.24e-8196.9Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MADNNPRRKSKMKPSATTTTTTTTTTSDD PH AFPDEYD EVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFSTAFHNHKPR+GKRGTTNPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

A0A6J1GYX8 protein EARLY FLOWERING 4-like5.62e-6986.05Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MAD NPRRKSK KPSATTTTTTTTTTSDD  H  FPDE D +VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFS+ F+N+K R GKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

A0A6J1IH33 protein EARLY FLOWERING 4-like2.79e-6986.05Show/hide
Query:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
        MA+ N RRKSK KPSATTTTTTTTTTSDD  H  FPDE DP+VWASFDQTFRQVQSVLDRNR LIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM
Subjt:  MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSM

Query:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA
        YSDFSSDFS+ F+NHK R GKRG++NPDA
Subjt:  YSDFSSDFSTAFHNHKPRTGKRGTTNPDA

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 46.3e-2470.13Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK
        DP +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK

O80877 Protein ELF4-LIKE 14.8e-1652.33Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + RT K G T
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTT

Q570U6 Protein ELF4-LIKE 41.2e-1147.14Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Q8S8F5 Protein ELF4-LIKE 35.0e-1339.33Show/hide
Query:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +           G  N
Subjt:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTN

Q94BS8 Protein ELF4-LIKE 24.0e-1043.06Show/hide
Query:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        + D ++  +F ++F QVQ +LD+NR LI ++N+NH+S+   ++  NV LI+ELN NI  V S+Y D S  F+
Subjt:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 48.8e-1347.14Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT1G17455.2 ELF4-like 48.8e-1347.14Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS
        D ++  SF ++F  VQ +LD+NR LI ++N+NH+S+ P N+  NV LI+ELN NI +V S+Y D S  F+
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFS

AT2G06255.1 ELF4-like 33.6e-1439.33Show/hide
Query:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTN
        + D ++  +F+++F QVQ++LD NR LI ++N+NH+S+IP N+  NV LI+ELN N+ +V  +Y D S++FS +           G  N
Subjt:  EYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTTN

AT2G29950.1 ELF4-like 13.4e-1752.33Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTT
        D EVW +    F++ Q  LD+NR LIQ+VNENH SRIP N+  NV LI E+NGNIS+V+ +YSD S +F+  F + + RT K G T
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRTGKRGTT

AT2G40080.1 Protein of unknown function (DUF1313)4.5e-2570.13Show/hide
Query:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK
        DP +W + D+ FRQVQSVLDRNR+LIQQVN+NHQSR+  NM  NVALIQELNGNISKVV+MYSD ++ FS+ FH  K
Subjt:  DPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGA
CGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAAT
CTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACT
GCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATAACAATCCCCGCCGCAAATCCAAAATGAAGCCTTCTGCAACCACCACCACTACCACTACCACCACCACCAGCGACGACGCCCCACATCACGCTTTCCCTGA
CGAATACGACCCCGAGGTATGGGCCTCTTTTGACCAAACCTTCCGCCAAGTCCAATCAGTGCTCGACAGAAACAGAACTCTCATTCAACAGGTGAATGAGAATCACCAAT
CTCGAATCCCAAGCAACATGGTTGACAACGTTGCTTTGATCCAAGAACTTAATGGAAACATCTCTAAAGTTGTTTCCATGTACTCTGATTTCTCCTCTGATTTCTCTACT
GCTTTCCATAACCACAAACCCAGAACTGGTAAAAGAGGCACCACCAACCCAGATGCTTGA
Protein sequenceShow/hide protein sequence
MADNNPRRKSKMKPSATTTTTTTTTTSDDAPHHAFPDEYDPEVWASFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFST
AFHNHKPRTGKRGTTNPDA