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CsGy5G008940 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G008940
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
Genome locationGy14Chr5:6949674..6950114
RNA-Seq ExpressionCsGy5G008940
SyntenyCsGy5G008940
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067024.1 uncharacterized protein E6C27_scaffold38G00600 [Cucumis melo var. makuwa]1.53e-7885.03Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLI PPP   L RPSTAFFP LR TP+LSSPWL HR AEA  EPRCVSQGGWG+SV   EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS
        MGEDEGR+PTDYNRRAKIFSTSSEVFQALKQH D VAPPP PP HHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS

XP_008456969.1 PREDICTED: uncharacterized protein LOC103496760 [Cucumis melo]1.69e-7785.03Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLI PPP   L RPSTAFFP LR TP+LSSPWL HR AEA  EPRCVSQGGWG+SV   EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS
        MGEDEGR+PTDYNRRAKIFSTSSEVFQALKQH D VAPPP PP HHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS

XP_011655051.1 uncharacterized protein LOC105435471 [Cucumis sativus]3.47e-103100Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS
        MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS

XP_023547061.1 uncharacterized protein LOC111805978 [Cucurbita pepo subsp. pepo]2.20e-6477.37Show/hide
Query:  SASLISPPP-PPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMG
        SASLI PPP PP LHR ST  FP LRP  ++S PW C R   A A PRCVSQGGWG SV   E +IEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIMG
Subjt:  SASLISPPP-PPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMG

Query:  EDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPP
        EDEGR+PTDYNRRAKIFSTSSEVFQALKQHSDA   P
Subjt:  EDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPP

XP_038892559.1 uncharacterized protein LOC120081603 [Benincasa hispida]1.29e-7581.21Show/hide
Query:  MQLSASLI-SPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGA-EPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKE
        MQ+SASLI  PPPPP  HRPSTA FP  RPTP +SSPWL HR   AGA EPRCVSQGGWG SV   E+DIEEWLK G+LEEKCGGGGKG+VELLECLEKE
Subjt:  MQLSASLI-SPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGA-EPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKE

Query:  AIMGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS
        AIMGEDEG+DPTDYNRRAKIFSTSS+VFQALKQHSDA APPP PP HHS
Subjt:  AIMGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS

TrEMBL top hitse value%identityAlignment
A0A0A0KQQ4 Uncharacterized protein1.68e-103100Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS
        MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS

A0A1S3C540 uncharacterized protein LOC1034967608.18e-7885.03Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLI PPP   L RPSTAFFP LR TP+LSSPWL HR AEA  EPRCVSQGGWG+SV   EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS
        MGEDEGR+PTDYNRRAKIFSTSSEVFQALKQH D VAPPP PP HHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS

A0A5D3DSR0 Uncharacterized protein7.40e-7985.03Show/hide
Query:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI
        MQLSASLI PPP   L RPSTAFFP LR TP+LSSPWL HR AEA  EPRCVSQGGWG+SV   EVDIEEWLKLGRLEEKCG GGKGIVELLECLEKEAI
Subjt:  MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAI

Query:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS
        MGEDEGR+PTDYNRRAKIFSTSSEVFQALKQH D VAPPP PP HHS
Subjt:  MGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPP-HHS

A0A6J1FW01 uncharacterized protein LOC1114478171.33e-6475.54Show/hide
Query:  LSASLISPPP-PPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIM
        +SASLI+PPP PP  HR ST  F  LRP  ++S  WLC R   A A PRCVSQGGWG SV   E +IEEWLKLGRLEEKCGGGGKG+VELLECLE+EAIM
Subjt:  LSASLISPPP-PPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIM

Query:  GEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPP
        GEDEGR+PTDYNRRAKIFSTSSEVFQALKQHSDA   PP
Subjt:  GEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPPP

A0A6J1JM89 uncharacterized protein LOC1114859332.41e-6373.91Show/hide
Query:  LSASLISPPPPP-LLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIM
        +SASLI PPP P   HR ST  FP +RP  ++S PW C R   A A PRCVSQGGWG SV   E +IEEWLKLGRL+EKCGGGGKG+VELLECLE+EAIM
Subjt:  LSASLISPPPPP-LLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIM

Query:  GEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPP
        GEDEGR+PTDYNRRAKIFSTSSEVFQALKQHSDA   P
Subjt:  GEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSDAVAPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G05220.1 unknown protein1.3e-1549.44Show/hide
Query:  AEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGG-GKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSD
        A  RCV+ G    +  +  +  EE  +L +    CGG   +G+ ELLECLEKEAIMG D+GRDP DYNRRAKIF  SS++F+ L +  D
Subjt:  AEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGG-GKGIVELLECLEKEAIMGEDEGRDPTDYNRRAKIFSTSSEVFQALKQHSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTCAGCATCTCTCATATCTCCACCACCTCCTCCCCTCCTCCACCGCCCCTCCACCGCCTTCTTCCCCAACCTCAGGCCAACTCCATCCCTTTCCTCACCATG
GCTCTGCCATCGACCTGCGGAGGCAGGGGCAGAGCCAAGATGTGTTAGTCAGGGTGGATGGGGAAGCTCTGTGGGTGTGGGGGAGGTGGACATAGAAGAGTGGCTGAAGC
TAGGGAGATTGGAGGAGAAGTGCGGCGGCGGAGGAAAGGGAATTGTGGAGCTACTTGAATGTTTGGAAAAAGAAGCCATTATGGGAGAAGATGAAGGGAGAGACCCAACA
GATTATAATAGAAGAGCTAAGATTTTCAGTACCAGTTCTGAAGTTTTCCAAGCTCTCAAGCAACATTCTGACGCTGTTGCTCCTCCTCCTTCTCCTCCTCACCATTCTTG
A
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTCAGCATCTCTCATATCTCCACCACCTCCTCCCCTCCTCCACCGCCCCTCCACCGCCTTCTTCCCCAACCTCAGGCCAACTCCATCCCTTTCCTCACCATG
GCTCTGCCATCGACCTGCGGAGGCAGGGGCAGAGCCAAGATGTGTTAGTCAGGGTGGATGGGGAAGCTCTGTGGGTGTGGGGGAGGTGGACATAGAAGAGTGGCTGAAGC
TAGGGAGATTGGAGGAGAAGTGCGGCGGCGGAGGAAAGGGAATTGTGGAGCTACTTGAATGTTTGGAAAAAGAAGCCATTATGGGAGAAGATGAAGGGAGAGACCCAACA
GATTATAATAGAAGAGCTAAGATTTTCAGTACCAGTTCTGAAGTTTTCCAAGCTCTCAAGCAACATTCTGACGCTGTTGCTCCTCCTCCTTCTCCTCCTCACCATTCTTG
A
Protein sequenceShow/hide protein sequence
MQLSASLISPPPPPLLHRPSTAFFPNLRPTPSLSSPWLCHRPAEAGAEPRCVSQGGWGSSVGVGEVDIEEWLKLGRLEEKCGGGGKGIVELLECLEKEAIMGEDEGRDPT
DYNRRAKIFSTSSEVFQALKQHSDAVAPPPSPPHHS