| GenBank top hits | e value | %identity | Alignment |
|---|
| ALM88234.1 RNA-dependent RNA polymerase 1b [Cucumis sativus] | 1.25e-206 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| BAL63010.1 RNA-dependent RNA polymerase 1 [Cucumis sativus] | 1.25e-206 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| NP_001267682.1 RNA-dependent RNA polymerase 1-like [Cucumis sativus] | 1.25e-206 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| XP_038877934.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] | 1.11e-192 | 89.51 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTPVPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEP+KAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAKLFSIAVDFPKTG+PALIPANLRV+EYPDFMDKADKVTYES+NVLGKLFRMLD+IGPNIKNIRSF YTP++AR+ YDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHY+KIKTEAELISGGSLTSSLSFT KNEAESI +AVKSLRKEARGWFNE ADLHYGH TNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| XP_038877939.1 RNA-dependent RNA polymerase 1-like isoform X2 [Benincasa hispida] | 4.25e-195 | 89.51 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP QVEPMDYTPVPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEP+KAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAKLFSIAVDFPKTG+PALIPANLRV+EYPDFMDKADKVTYES+NVLGKLFRMLD+IGPNIKNIRSF YTP++AR+ YDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHY+KIKTEAELISGGSLTSSLSFT KNEAESI +AVKSLRKEARGWFNE ADLHYGH TNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0S1YCZ7 RNA-dependent RNA polymerase | 6.06e-207 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| A0A6J1D0F4 RNA-dependent RNA polymerase | 8.99e-172 | 86.25 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD+EPKKAMS P
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAKLFSIAVDFPKTGVPALIPANLRV+EYPDFMDKADKVTY+SENVLGKLFRMLD I P I +IRSF T ++ARQ YDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
K NYDMRLGNLM+Y++IK EAELISGGSL+ SLS T KNEAESI AV+SLRKEAR WFNE A+LH+ H NVYARASAWYFVTYHH+YWG
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
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| A0A6J1FR02 RNA-dependent RNA polymerase | 1.31e-167 | 80.98 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DC+VFPQKG RPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPS++LDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFAD P+KAMS P
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAKLFSIAVDFPKTGVPALI A+LRV+ YPDFMDK DK +Y+S NVLGKLFRMLD I P I +I+S +T E+ARQ YDPDMEV+GFEEYLDDA+YH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLM Y+KIKTEAELISG SLT S SFT KNEAESII+AVKSLRKEARGWFNE A LH+GH N YARASAWYFVTYH++YWG E+ +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| E9NWK7 RNA-dependent RNA polymerase | 6.06e-207 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| H3K3Y9 RNA-dependent RNA polymerase | 6.06e-207 | 96.39 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG +
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWGGLMAERIMA
Query: IFLAF
FL+F
Subjt: IFLAF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O82504 RNA-dependent RNA polymerase 2 | 3.3e-64 | 42.66 | Show/hide |
Query: IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPC
+DC++FPQKG RPHPNECSG DLDGD +FV WD +IP + PMDY +++DHDVT+EE+ ++F +YM++D+LG+I+ AH AD++P+KA S C
Subjt: IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPC
Query: IQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQD---YDPDMEVEGFEEYLDDAI
++LA L S AVDF KTG PA +P L+ +E+PDF+++ +K TY SE+V GKL+R + S K PE +D YD +E GFE +++ A
Subjt: IQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQD---YDPDMEVEGFEEYLDDAI
Query: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
H++ Y +L +LM Y+ E E+++G T + N + I L+VK L KEA GWF + + ASAWY+VTY+
Subjt: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
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| Q0DXS3 Probable RNA-dependent RNA polymerase 1 | 1.6e-103 | 63.36 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M +CVVFPQ+G RPHPNECSGSDLDGDIYFV WDP LIPP+ V PMDYTP P++ LDHDVT+EEV+EYF NY+VN+SLG+IANAH FADKE KA S+P
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAKLFSIAVDFPKTGVPALIP L VKEYPDFM+K DKVTYES+ V+GKL+R + P+IK ++T E+AR+ YD DM V+G+E+Y+ +A+
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGH-HTNVYARASAWYFVTYHHTYWG
K+ YD +LGNLM ++ IK+EAE+ISG L + +FT K++A++I LAV+SLRKEAR F+E + GH H A+ASAWY VTYH +WG
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGH-HTNVYARASAWYFVTYHHTYWG
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| Q7XM31 Probable RNA-dependent RNA polymerase 2 | 1.6e-66 | 44.67 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DC+VFPQ+G RPHPNECSG DLDGD+YF+ WD LIP + PMDYT +++DH VT+EE+Q++F +YM+NDSLG I+ AH AD+ P KA S
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
C+QLA L S+AVDF KTG PA +P LR +EYPDFM++ +K Y S VLGKL+R + + + + YDPD+EV G +E+L A +
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
Y+ +L LM+Y++ + E E+++G L N+ + I+ AV +L +EARGW L + ASAWY VTYH
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
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| Q8LHH9 Probable RNA-dependent RNA polymerase SHL2 | 3.1e-54 | 40.33 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--QQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMS
++DC+VFPQKG RPH NE SGSDLDGD+YFV WD LIPP + PMDY+P ++ L V+ ++ ++F M++++LG I NAH AD AM
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--QQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMS
Query: NPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAI
CI LA+L + AVDFPKTG A++P +L+ K YPDFM K D +Y+SE +LG+L+R + N + TP YD D+EV G ++L A
Subjt: NPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAI
Query: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEA-------ESIILAVKSLRKEARGWF----NEKADLHYGHHTNVY-ARASAWYFVTYH
K +YD +L L+ ++++TEAEL++G ++F +KN + + + A +LRKE + F +++ ++ +Y +ASAWY VTYH
Subjt: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEA-------ESIILAVKSLRKEARGWF----NEKADLHYGHHTNVY-ARASAWYFVTYH
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| Q9LQV2 RNA-dependent RNA polymerase 1 | 1.8e-110 | 66.67 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+ EPMDYTP P+Q+LDHDVT+EEV+EYFANY+VNDSLGIIANAHTAFADKEP KA S+P
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAK FS AVDFPKTGV A+IP +L VKEYPDFM+K DK TYES+NV+GKLFR + P + +I+SF T ++A + YD DMEV+GFEEY+D+A Y
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
K NYD +LGNLM Y+ IKTEAE++SGG + S SFT + +AESI AV++LRKE FN + N A+ASAWY VTYH +YWG
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G14790.1 RNA-dependent RNA polymerase 1 | 1.3e-111 | 66.67 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
M+DCVVFPQKG RPHPNECSGSDLDGDIYFVCWD +L+PP+ EPMDYTP P+Q+LDHDVT+EEV+EYFANY+VNDSLGIIANAHTAFADKEP KA S+P
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNP
Query: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
CI+LAK FS AVDFPKTGV A+IP +L VKEYPDFM+K DK TYES+NV+GKLFR + P + +I+SF T ++A + YD DMEV+GFEEY+D+A Y
Subjt: CIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAIYH
Query: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
K NYD +LGNLM Y+ IKTEAE++SGG + S SFT + +AESI AV++LRKE FN + N A+ASAWY VTYH +YWG
Subjt: KNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYHHTYWG
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| AT2G19910.1 RNA-dependent RNA polymerase family protein | 5.5e-14 | 28.98 | Show/hide |
Query: VVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP-QQVEPMDYTPVPSQV--------LDHDVTMEEVQEYF--ANYMVNDSLGIIANAHTAFAD---
V FPQKG R +E +G D DGD+YF+ +P L+ + EP + PS++ L + EE+ + F A + D +G+ A+ D
Subjt: VVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP-QQVEPMDYTPVPSQV--------LDHDVTMEEVQEYF--ANYMVNDSLGIIANAHTAFAD---
Query: -------KEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDS
KE + N ++L ++ A+D PK G +P +L +K +P +M++ K + S ++LG +F +DS
Subjt: -------KEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDS
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| AT2G19930.1 RNA-dependent RNA polymerase family protein | 7.9e-13 | 23.55 | Show/hide |
Query: VVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP-QQVEP-MDYTP--------VPSQVLDHDVTMEEVQEYF--ANYMVNDSLGIIANAHTAFADK-
V FPQKG R +E +G D DGD+YF+ +P+L+ + EP + TP PSQ+ ++ EE+ E F A + ++ +GI A++ D+
Subjt: VVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP-QQVEP-MDYTP--------VPSQVLDHDVTMEEVQEYF--ANYMVNDSLGIIANAHTAFADK-
Query: --------EPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDP
E K M ++L ++ A+D PK G +P L+ +P +M++ K ++S ++LG + F++ ++ P
Subjt: --------EPKKAMSNPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDP
Query: DMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFV
E+ + D+ + + RL Y +TE +T ++ A +I K A G+ + K L +Y +A A Y +
Subjt: DMEVEGFEEYLDDAIYHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEAESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFV
Query: TYHHTYWGGL
Y + G+
Subjt: TYHHTYWGGL
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| AT3G49500.1 RNA-dependent RNA polymerase 6 | 5.1e-52 | 39.86 | Show/hide |
Query: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--QQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMS
M DC++FPQKG RPH NE SGSDLDGD+YFV WD LIPP + M Y + L V +++ ++FA + N+ LG I NAH AD+ AM
Subjt: MIDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPP--QQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMS
Query: NPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAI
C+ LA+L + AVDFPKTG +P +L+ K YPDFM K D TY+S +LG+L+R + + S T A YD +E+ GFE+ + +A
Subjt: NPCIQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQDYDPDMEVEGFEEYLDDAI
Query: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEA---ESIILAVKSLRKEARGWFNEKADLHYG---HHTNVY--ARASAWYFVTYH
HK YD +L L+ +K++ E E+++ G + S +T K + E + + SL+KE R F E H N+ +ASAWY VTYH
Subjt: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNEA---ESIILAVKSLRKEARGWFNEKADLHYG---HHTNVY--ARASAWYFVTYH
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| AT4G11130.1 RNA-dependent RNA polymerase 2 | 2.3e-65 | 42.66 | Show/hide |
Query: IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPC
+DC++FPQKG RPHPNECSG DLDGD +FV WD +IP + PMDY +++DHDVT+EE+ ++F +YM++D+LG+I+ AH AD++P+KA S C
Subjt: IDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPDLIPPQQVEPMDYTPVPSQVLDHDVTMEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPC
Query: IQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQD---YDPDMEVEGFEEYLDDAI
++LA L S AVDF KTG PA +P L+ +E+PDF+++ +K TY SE+V GKL+R + S K PE +D YD +E GFE +++ A
Subjt: IQLAKLFSIAVDFPKTGVPALIPANLRVKEYPDFMDKADKVTYESENVLGKLFRMLDSIGPNIKNIRSFNYTPEMARQD---YDPDMEVEGFEEYLDDAI
Query: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
H++ Y +L +LM Y+ E E+++G T + N + I L+VK L KEA GWF + + ASAWY+VTY+
Subjt: YHKNNYDMRLGNLMHYHKIKTEAELISGGSLTSSLSFTMKNE-----AESIILAVKSLRKEARGWFNEKADLHYGHHTNVYARASAWYFVTYH
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