; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G009990 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G009990
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionC2H2-type domain-containing protein
Genome locationGy14Chr5:8880620..8881045
RNA-Seq ExpressionCsGy5G009990
SyntenyCsGy5G009990
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648113.1 hypothetical protein Csa_004735 [Cucumis sativus]5.77e-87100Show/hide
Query:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPK
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPK
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPK

TYK14444.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa]1.26e-4965.33Show/hide
Query:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS
        MN  KQ SGGS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+   I TDLRWVVPSA AEG  RDRNRGKG K       V+EL LF 
Subjt:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSN KKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_004140464.1 probable transcriptional regulator RABBIT EARS [Cucumis sativus]4.10e-95100Show/hide
Query:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_008465230.1 PREDICTED: uncharacterized protein LOC103502886 [Cucumis melo]2.54e-4965.33Show/hide
Query:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS
        MN  KQ SGGS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+   I TDLRWVV SA AEG  RDRNRGKG K       V+EL LF 
Subjt:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

XP_022141797.1 transcriptional regulator TAC1-like [Momordica charantia]1.18e-1337.2Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK
        +EC+ CK+ F +A+ALGGHM +H   +  AK+KQS+                    IST  R  WV+PS   EG  R  +RG              KGK 
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK

Query:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT
        VQ+LQLF +K S + +K            SD+K      QH +  +ELDLELRLG  P+ STP+
Subjt:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT

TrEMBL top hitse value%identityAlignment
A0A0A0KR10 C2H2-type domain-containing protein1.99e-95100Show/hide
Query:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
        MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK
Subjt:  MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKK

Query:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
Subjt:  QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A1S3CNE2 uncharacterized protein LOC1035028861.23e-4965.33Show/hide
Query:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS
        MN  KQ SGGS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+   I TDLRWVV SA AEG  RDRNRGKG K       V+EL LF 
Subjt:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A5A7VBW4 Transcriptional regulator TAC1-like1.23e-4965.33Show/hide
Query:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS
        MN  KQ SGGS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+   I TDLRWVV SA AEG  RDRNRGKG K       V+EL LF 
Subjt:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSNPKKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A5D3CTX8 Transcriptional regulator TAC1-like6.11e-5065.33Show/hide
Query:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS
        MN  KQ SGGS S SW +EC+ICK+SFKSAKALGGHM +H+  EID KLK QS+   I TDLRWVVPSA AEG  RDRNRGKG K       V+EL LF 
Subjt:  MNLEKQKSGGSHSTSW-HECSICKKSFKSAKALGGHMRVHNTGEIDAKLK-QSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKK-------VQELQLFS

Query:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF
        +KPS LKK   ++   GQSSQ DNV +E+DLELRLGSN KKST T FKFF
Subjt:  QKPSKLKKKQSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPTIFKFF

A0A6J1CKV7 transcriptional regulator TAC1-like5.72e-1437.2Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK
        +EC+ CK+ F +A+ALGGHM +H   +  AK+KQS+                    IST  R  WV+PS   EG  R  +RG              KGK 
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGP-----------------ISTDLR--WVVPSAIAEGSSRDRNRG--------------KGKK

Query:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT
        VQ+LQLF +K S + +K            SD+K      QH +  +ELDLELRLG  P+ STP+
Subjt:  VQELQLFSQKPSKLKKK-----------QSDEKAGGQSSQHDNVDNELDLELRLGSNPKKSTPT

SwissProt top hitse value%identityAlignment
Q9LHS9 Probable transcriptional regulator RABBIT EARS1.9e-0533.57Show/hide
Query:  QKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQ
        ++ GG     W    + CS C + FKSA+ALGGHM VH      A+LKQ SL P STD      +   E   + +    G KV  +Q  ++KP+  K++ 
Subjt:  QKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQ

Query:  SDE------KAGGQSSQHDNVDNELDLELRLGS---NPKK
        SD       ++  +  +HDN + + DL + L S   +P+K
Subjt:  SDE------KAGGQSSQHDNVDNELDLELRLGS---NPKK

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 103.6e-0454.29Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS
        + CS C++ FKSA+ALGGHM VH      A+LKQ+
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-0451.43Show/hide
Query:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS
        + CS CK+ F+SA+ALGGHM VH       +L+QS
Subjt:  HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQS

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein2.8e-0435.85Show/hide
Query:  EKQKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSS
        E+   G    T+W    + C+ C++ F+SA+ALGGHM VH      ++  Q S
Subjt:  EKQKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSS

AT5G03510.1 C2H2-type zinc finger family protein2.1e-0442.37Show/hide
Query:  MNLEKQKSGGSHS-TSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPIST
        ++L+   S GS      HECSICK  F S +ALGGHMR H    I+A    +    IS+
Subjt:  MNLEKQKSGGSHS-TSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPIST

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-0633.57Show/hide
Query:  QKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQ
        ++ GG     W    + CS C + FKSA+ALGGHM VH      A+LKQ SL P STD      +   E   + +    G KV  +Q  ++KP+  K++ 
Subjt:  QKSGGSHSTSW----HECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQ

Query:  SDE------KAGGQSSQHDNVDNELDLELRLGS---NPKK
        SD       ++  +  +HDN + + DL + L S   +P+K
Subjt:  SDE------KAGGQSSQHDNVDNELDLELRLGS---NPKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTAGAGAAACAAAAAAGTGGTGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCG
AGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATTGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTC
GAGATCGAAACCGAGGGAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCA
TCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTAGAGAAACAAAAAAGTGGTGGGAGTCATTCAACATCTTGGCATGAGTGTAGTATTTGCAAGAAGAGCTTCAAAAGTGCAAAAGCTTTAGGAGGACATATGCG
AGTGCATAACACTGGGGAGATAGACGCTAAGTTAAAGCAATCATCATTGGGACCAATCTCCACAGATTTGAGATGGGTAGTCCCGTCAGCTATTGCAGAAGGTAGTAGTC
GAGATCGAAACCGAGGGAAGGGTAAGAAGGTACAAGAACTTCAACTTTTCAGCCAAAAACCCTCCAAGTTGAAGAAAAAGCAGTCCGATGAGAAGGCAGGAGGACAATCA
TCTCAACATGATAATGTTGACAATGAGTTGGATCTTGAACTTAGATTAGGATCTAACCCAAAGAAGTCAACTCCAACTATATTTAAGTTCTTCTGA
Protein sequenceShow/hide protein sequence
MNLEKQKSGGSHSTSWHECSICKKSFKSAKALGGHMRVHNTGEIDAKLKQSSLGPISTDLRWVVPSAIAEGSSRDRNRGKGKKVQELQLFSQKPSKLKKKQSDEKAGGQS
SQHDNVDNELDLELRLGSNPKKSTPTIFKFF