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CsGy5G010050 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G010050
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPectinesterase
Genome locationGy14Chr5:8991088..8991789
RNA-Seq ExpressionCsGy5G010050
SyntenyCsGy5G010050
Gene Ontology termsGO:0042545 - cell wall modification (biological process)
GO:0030599 - pectinesterase activity (molecular function)
InterPro domainsIPR000070 - Pectinesterase, catalytic
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055283.1 putative pectinesterase/pectinesterase inhibitor 41 [Cucumis melo var. makuwa]6.61e-3958.33Show/hide
Query:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHHCF---------VGDN----------------------TASKANVKIYLGRLWRQYSR
        SNNFLA+SL+FEN  GPQNGQ VAVLDQARF AYHKCR     CF         + +N                       ASKANVK+YL R WRQYSR
Subjt:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHHCF---------VGDN----------------------TASKANVKIYLGRLWRQYSR

Query:  VVFMESFLNEEVLPEEWSEWPRVPMTNLFYEE
        VVFMESFLNEEVLPE WSEW  VP  NLFY E
Subjt:  VVFMESFLNEEVLPEEWSEWPRVPMTNLFYEE

KAA0055287.1 putative pectinesterase/pectinesterase inhibitor 41 [Cucumis melo var. makuwa]4.28e-4148.09Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH--CFVGDNT-------------------------------------------------
        +NF+A+SL+FEN  GPQNGQAVAVLDQARF AYHKCRFL      +VG  +                                                 
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH--CFVGDNT-------------------------------------------------

Query:  ------------------ASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV
                          ASKANVKIYL R WRQYSRVVFMESFL+EEVLPE WSEWP VP  NLFY EFNNRG GA+VSK V
Subjt:  ------------------ASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV

KAA0055288.1 putative pectinesterase/pectinesterase inhibitor 41 [Cucumis melo var. makuwa]3.28e-4046.15Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------
        NNFLA+SL+FEN  GPQNGQAVAVLDQA F AYHKC+FL                                                             
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------

Query:  -----HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV
              +C V    +   +KANVKIYLGR WRQYS+VVFMESFL++EV+PE WSEWP VP+ NLFY EFNNRG GA+VSK V
Subjt:  -----HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV

KAE8648077.1 hypothetical protein Csa_018832 [Cucumis sativus]1.37e-3541.62Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------
        NNFLAQSL+F+N  GPQNGQAVAVLD+A F  Y+KCRFL                                                             
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------

Query:  ------HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMVLC
               +C +    +  A+KA+VKIYLGR WRQYS+VVFMESFL++EV+P+ W +W  VP+ NLFY EFNNRG GA+VSK + C
Subjt:  ------HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMVLC

TYJ99206.1 putative pectinesterase/pectinesterase inhibitor 41 [Cucumis melo var. makuwa]9.10e-3958.02Show/hide
Query:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH---CFV---------------------------GDNTASKANVKIYLGRLWRQYSRV
        SNNFLA+SL+FEN  GPQNGQ VAVLDQARF AYHKCRFLD     CF                             +  ASKA+VK+YL R WRQYSRV
Subjt:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH---CFV---------------------------GDNTASKANVKIYLGRLWRQYSRV

Query:  VFMESFLNEEVLPEEWSEWPRVPMTNLFYEE
        VF++SFLNEEVLPE WSEW  VP  NLFY E
Subjt:  VFMESFLNEEVLPEEWSEWPRVPMTNLFYEE

TrEMBL top hitse value%identityAlignment
A0A1S3CP85 Pectinesterase3.92e-3139.89Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD----------HHCFVGDN------------------------------------------
        NNF+A+SL+FEN  GPQNGQAVAV D+A   AY+KCRFL           +  F   N                                          
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD----------HHCFVGDN------------------------------------------

Query:  -----------------TASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV
                         +++K NVK++LGRLWRQYS VVFMESFL++ V  E W EW  VP+ NLFY EFNN G GA+VSK V
Subjt:  -----------------TASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV

A0A5A7UH51 Pectinesterase3.20e-3958.33Show/hide
Query:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHHCF---------VGDN----------------------TASKANVKIYLGRLWRQYSR
        SNNFLA+SL+FEN  GPQNGQ VAVLDQARF AYHKCR     CF         + +N                       ASKANVK+YL R WRQYSR
Subjt:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHHCF---------VGDN----------------------TASKANVKIYLGRLWRQYSR

Query:  VVFMESFLNEEVLPEEWSEWPRVPMTNLFYEE
        VVFMESFLNEEVLPE WSEW  VP  NLFY E
Subjt:  VVFMESFLNEEVLPEEWSEWPRVPMTNLFYEE

A0A5D3BHF7 Pectinesterase2.07e-4148.09Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH--CFVGDNT-------------------------------------------------
        +NF+A+SL+FEN  GPQNGQAVAVLDQARF AYHKCRFL      +VG  +                                                 
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH--CFVGDNT-------------------------------------------------

Query:  ------------------ASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV
                          ASKANVKIYL R WRQYSRVVFMESFL+EEVLPE WSEWP VP  NLFY EFNNRG GA+VSK V
Subjt:  ------------------ASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV

A0A5D3BJD0 Pectinesterase4.41e-3958.02Show/hide
Query:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH---CFV---------------------------GDNTASKANVKIYLGRLWRQYSRV
        SNNFLA+SL+FEN  GPQNGQ VAVLDQARF AYHKCRFLD     CF                             +  ASKA+VK+YL R WRQYSRV
Subjt:  SNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHH---CFV---------------------------GDNTASKANVKIYLGRLWRQYSRV

Query:  VFMESFLNEEVLPEEWSEWPRVPMTNLFYEE
        VF++SFLNEEVLPE WSEW  VP  NLFY E
Subjt:  VFMESFLNEEVLPEEWSEWPRVPMTNLFYEE

A0A5D3BKF8 Pectinesterase1.59e-4046.15Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------
        NNFLA+SL+FEN  GPQNGQAVAVLDQA F AYHKC+FL                                                             
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLD------------------------------------------------------------

Query:  -----HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV
              +C V    +   +KANVKIYLGR WRQYS+VVFMESFL++EV+PE WSEWP VP+ NLFY EFNNRG GA+VSK V
Subjt:  -----HHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTNLFYEEFNNRGSGANVSKMV

SwissProt top hitse value%identityAlignment
O49006 Pectinesterase/pectinesterase inhibitor 31.0e-1033.01Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS
        P +GQ   V  Q R         +   C +G   D  + K +   YLGR W++YS+ V M+S +++ + PE WSEW     +  L Y E++N G+GA  +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS

Query:  KMV
          V
Subjt:  KMV

O49298 Probable pectinesterase/pectinesterase inhibitor 61.0e-1027.68Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HCFV--------GDNTASKANVKI---------------------
        N F+AQ ++FEN  GP+  QAVA+   + F  ++ C F  +              +C +        GD TA   N  I                     
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HCFV--------GDNTASKANVKI---------------------

Query:  -------------------YLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV
                           YLGR WR +SR VFM+  L   V P  W  W     ++ L+Y E+ N G+GA+VS  V
Subjt:  -------------------YLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV

P85076 Pectinesterase1.0e-1025.4Show/hide
Query:  LISNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HC-------FVGDNTAS---KANV------------------
        ++   F+A+ +SFEN+ GP   QAVA+   A F A+++C F+ +               C       F+  N A+   K N+                  
Subjt:  LISNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HC-------FVGDNTAS---KANV------------------

Query:  -----------------------------KIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV
                                     K YLGR W++YSR VF+ S +   + P  W EW     +T L+Y E+ N G G+N +  V
Subjt:  -----------------------------KIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV

Q42534 Pectinesterase 26.0e-1134.95Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS
        P +GQ   V  Q R         +  +C +G   D  A K     YLGR W++YSR V M+S +++ + PE W EW     +  L Y E+ NRG GA  +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS

Query:  KMV
          V
Subjt:  KMV

Q8RXK7 Probable pectinesterase/pectinesterase inhibitor 412.9e-1336.54Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVS
        P   Q  A+  Q R           H+C +    D  +S   VK YLGR W++YSR VFM+S+++E V P  W EW     ++ L+Y E+NN GSG++ +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVS

Query:  KMVL
          V+
Subjt:  KMVL

Arabidopsis top hitse value%identityAlignment
AT1G02810.1 Plant invertase/pectin methylesterase inhibitor superfamily1.6e-1142.03Show/hide
Query:  DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVSKMV
        D  +S   VK YLGR W++YSR V+M+S+++  V P  W EW     ++ L+Y E+NN G G+N +  V
Subjt:  DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVSKMV

AT1G23200.1 Plant invertase/pectin methylesterase inhibitor superfamily7.3e-1227.68Show/hide
Query:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HCFV--------GDNTASKANVKI---------------------
        N F+AQ ++FEN  GP+  QAVA+   + F  ++ C F  +              +C +        GD TA   N  I                     
Subjt:  NNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDH--------------HCFV--------GDNTASKANVKI---------------------

Query:  -------------------YLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV
                           YLGR WR +SR VFM+  L   V P  W  W     ++ L+Y E+ N G+GA+VS  V
Subjt:  -------------------YLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVSKMV

AT1G53830.1 pectin methylesterase 24.3e-1234.95Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS
        P +GQ   V  Q R         +  +C +G   D  A K     YLGR W++YSR V M+S +++ + PE W EW     +  L Y E+ NRG GA  +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS

Query:  KMV
          V
Subjt:  KMV

AT3G14310.1 pectin methylesterase 37.3e-1233.01Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS
        P +GQ   V  Q R         +   C +G   D  + K +   YLGR W++YS+ V M+S +++ + PE WSEW     +  L Y E++N G+GA  +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFVG---DNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWP-RVPMTNLFYEEFNNRGSGANVS

Query:  KMV
          V
Subjt:  KMV

AT4G02330.1 Plant invertase/pectin methylesterase inhibitor superfamily2.0e-1436.54Show/hide
Query:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVS
        P   Q  A+  Q R           H+C +    D  +S   VK YLGR W++YSR VFM+S+++E V P  W EW     ++ L+Y E+NN GSG++ +
Subjt:  PQNGQAVAVLDQARFGAYHKCRFLDHHCFV---GDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEW-PRVPMTNLFYEEFNNRGSGANVS

Query:  KMVL
          V+
Subjt:  KMVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGTAGATCTGCAACCCTTGATAAGTAATAATTTTCTTGCACAATCATTGAGTTTTGAAAACTTCGTCGGTCCTCAAAATGGCCAAGCAGTGGCAGTTCTT
GACCAAGCTCGCTTCGGTGCTTATCACAAGTGCAGATTCTTAGACCATCATTGTTTCGTTGGAGATAACACAGCCAGCAAAGCTAACGTCAAAATCTATCTTGGC
CGACTGTGGAGACAATATTCACGAGTAGTGTTCATGGAGTCATTTCTTAATGAGGAAGTGTTGCCTGAAGAATGGTCAGAGTGGCCAAGGGTACCAATGACCAAT
TTGTTTTACGAAGAGTTTAATAACCGTGGTTCTGGGGCAAATGTCTCTAAAATGGTACTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCGTAGATCTGCAACCCTTGATAAGTAATAATTTTCTTGCACAATCATTGAGTTTTGAAAACTTCGTCGGTCCTCAAAATGGCCAAGCAGTGGCAGTTCTT
GACCAAGCTCGCTTCGGTGCTTATCACAAGTGCAGATTCTTAGACCATCATTGTTTCGTTGGAGATAACACAGCCAGCAAAGCTAACGTCAAAATCTATCTTGGC
CGACTGTGGAGACAATATTCACGAGTAGTGTTCATGGAGTCATTTCTTAATGAGGAAGTGTTGCCTGAAGAATGGTCAGAGTGGCCAAGGGTACCAATGACCAAT
TTGTTTTACGAAGAGTTTAATAACCGTGGTTCTGGGGCAAATGTCTCTAAAATGGTACTTTGTTAA
Protein sequenceShow/hide protein sequence
MIVDLQPLISNNFLAQSLSFENFVGPQNGQAVAVLDQARFGAYHKCRFLDHHCFVGDNTASKANVKIYLGRLWRQYSRVVFMESFLNEEVLPEEWSEWPRVPMTN
LFYEEFNNRGSGANVSKMVLC