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CsGy5G010463 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G010463
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionReverse transcriptase
Genome locationGy14Chr5:10726689..10727324
RNA-Seq ExpressionCsGy5G010463
SyntenyCsGy5G010463
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036882.1 uncharacterized protein E6C27_scaffold2534G00010 [Cucumis melo var. makuwa]1.63e-4651.76Show/hide
Query:  KKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRHE
        K + IERLK LG   FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR E
Subjt:  KKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRHE

Query:  FLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        FL L+Q SL VA+YERK+TE+ R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  FLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

KAA0037547.1 uncharacterized protein E6C27_scaffold277G001660 [Cucumis melo var. makuwa]2.07e-4752.05Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LG T FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EF+ L+Q SL VA+YERK+TEL  +V  I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

KAA0037805.1 uncharacterized protein E6C27_scaffold918G00190 [Cucumis melo var. makuwa]2.40e-4752.63Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LG T FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EFL L+Q SL VA+YERK+TEL R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

KAA0050492.1 uncharacterized protein E6C27_scaffold175G001240 [Cucumis melo var. makuwa]1.50e-4651.74Show/hide
Query:  NDKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKR
        ++K + IERLK LG T FE STDP D + WLN+LE+CF VMNCLEE+KV+LATF+LQKE +GWW S                    +D+ YP   CE KR
Subjt:  NDKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKR

Query:  HEFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
         EFL L+Q SL V +YERK+TEL R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  HEFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

KAA0051483.1 uncharacterized protein E6C27_scaffold174G00020 [Cucumis melo var. makuwa]1.68e-4652.05Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LGVT FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE E WW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EFL L+Q SL VA+YERK+TEL R+   IVAS+          L+ +I+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

TrEMBL top hitse value%identityAlignment
A0A5A7T0C1 Retrotrans_gag domain-containing protein7.89e-4751.76Show/hide
Query:  KKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRHE
        K + IERLK LG   FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR E
Subjt:  KKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRHE

Query:  FLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        FL L+Q SL VA+YERK+TE+ R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  FLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

A0A5A7T7M1 Retrotrans_gag domain-containing protein1.00e-4752.05Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LG T FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EF+ L+Q SL VA+YERK+TEL  +V  I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

A0A5A7T8K4 Retrotrans_gag domain-containing protein1.16e-4752.63Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LG T FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE EGWW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EFL L+Q SL VA+YERK+TEL R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

A0A5A7U3T0 CCHC-type domain-containing protein7.28e-4751.74Show/hide
Query:  NDKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKR
        ++K + IERLK LG T FE STDP D + WLN+LE+CF VMNCLEE+KV+LATF+LQKE +GWW S                    +D+ YP   CE KR
Subjt:  NDKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKR

Query:  HEFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
         EFL L+Q SL V +YERK+TEL R+   I+ASE          L+ EI+TPV   +KW  FSQLVET LRV
Subjt:  HEFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

A0A5A7U6G1 Retrotrans_gag domain-containing protein8.14e-4752.05Show/hide
Query:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH
        +K + IERLK LGVT FE STDP D + WLN+LE+CF VMNC EE+KV+LATF+LQKE E WW S                    +D+ YP   CE KR 
Subjt:  DKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFST-------------------KDRSYPKVCCETKRH

Query:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV
        EFL L+Q SL VA+YERK+TEL R+   IVAS+          L+ +I+TPV   +KW  FSQLVET LRV
Subjt:  EFLRLRQNSLLVAKYERKFTELFRHVGPIVASER---------LKQEIQTPVATTSKWEYFSQLVETTLRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAAAACTTTGGAAAGTGAATCAAGTACGAGGCATGGTGGAATGGATAAACAAAGCTACCAAAAAATGTTCCAAAGATTTAGGGATCCAATGGGAACCATGCA
AATTAGAAATGATAAGAAACATAGCATTGAAAGATTGAAATCTTTAGGTGTTACAAATTTTGAAGAATCCACAGATCCGACTGACACAAAAACATGGTTGAATATATTAG
AGAGGTGTTTTAAAGTAATGAATTGTCTTGAAGAGAAGAAAGTCAAGTTAGCAACTTTCGTACTGCAAAAGGAAGTAGAAGGATGGTGGTTTTCAACTAAAGATAGATCT
TATCCCAAGGTCTGTTGTGAAACAAAGAGGCATGAATTCCTAAGATTAAGACAAAATTCATTGTTGGTGGCTAAGTACGAGAGAAAGTTCACAGAACTCTTTCGACATGT
TGGACCAATTGTGGCATCCGAAAGACTTAAACAAGAAATTCAGACTCCAGTAGCAACAACATCAAAGTGGGAGTATTTCTCACAGTTAGTTGAAACTACTTTAAGAGTCT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGAAAACTTTGGAAAGTGAATCAAGTACGAGGCATGGTGGAATGGATAAACAAAGCTACCAAAAAATGTTCCAAAGATTTAGGGATCCAATGGGAACCATGCA
AATTAGAAATGATAAGAAACATAGCATTGAAAGATTGAAATCTTTAGGTGTTACAAATTTTGAAGAATCCACAGATCCGACTGACACAAAAACATGGTTGAATATATTAG
AGAGGTGTTTTAAAGTAATGAATTGTCTTGAAGAGAAGAAAGTCAAGTTAGCAACTTTCGTACTGCAAAAGGAAGTAGAAGGATGGTGGTTTTCAACTAAAGATAGATCT
TATCCCAAGGTCTGTTGTGAAACAAAGAGGCATGAATTCCTAAGATTAAGACAAAATTCATTGTTGGTGGCTAAGTACGAGAGAAAGTTCACAGAACTCTTTCGACATGT
TGGACCAATTGTGGCATCCGAAAGACTTAAACAAGAAATTCAGACTCCAGTAGCAACAACATCAAAGTGGGAGTATTTCTCACAGTTAGTTGAAACTACTTTAAGAGTCT
AA
Protein sequenceShow/hide protein sequence
MEEKTLESESSTRHGGMDKQSYQKMFQRFRDPMGTMQIRNDKKHSIERLKSLGVTNFEESTDPTDTKTWLNILERCFKVMNCLEEKKVKLATFVLQKEVEGWWFSTKDRS
YPKVCCETKRHEFLRLRQNSLLVAKYERKFTELFRHVGPIVASERLKQEIQTPVATTSKWEYFSQLVETTLRV