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CsGy5G011010 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G011010
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionFimbrin-5
Genome locationGy14Chr5:11653214..11656754
RNA-Seq ExpressionCsGy5G011010
SyntenyCsGy5G011010
Gene Ontology termsGO:0051017 - actin filament bundle assembly (biological process)
GO:0051639 - actin filament network formation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005884 - actin filament (cellular component)
GO:0032432 - actin filament bundle (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR001715 - Calponin homology domain
IPR036872 - CH domain superfamily
IPR039959 - Fimbrin/Plastin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058971.1 fimbrin-5 [Cucumis melo var. makuwa]9.86e-2782.54Show/hide
Query:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSE+AN +V+ELVEKLDYKRYI+PKDIVEG+ NLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

KAA0059149.1 fimbrin-5 [Cucumis melo var. makuwa]1.15e-2688.71Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSERANMVL+L EKLD KRYITPKDIVEGSPNLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

KAE8648188.1 hypothetical protein Csa_023894 [Cucumis sativus]5.34e-44100Show/hide
Query:  MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
Subjt:  MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

XP_008455508.1 PREDICTED: fimbrin-5 [Cucumis melo]1.15e-2688.71Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSERANMVL+L EKLD KRYITPKDIVEGSPNLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

XP_038888540.1 fimbrin-5-like [Benincasa hispida]1.15e-2688.71Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDP+ERANMVLEL EKLD KRYITPKDIVEGSPNLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

TrEMBL top hitse value%identityAlignment
A0A0A0KL95 Uncharacterized protein1.97e-3198.21Show/hide
Query:  MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGS
        MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEG 
Subjt:  MERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGS

A0A1S4E0J8 fimbrin-55.58e-2788.71Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSERANMVL+L EKLD KRYITPKDIVEGSPNLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

A0A5A7UZR3 Fimbrin-54.77e-2782.54Show/hide
Query:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSE+AN +V+ELVEKLDYKRYI+PKDIVEG+ NLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

A0A5A7V024 Fimbrin-55.58e-2788.71Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSERANMVL+L EKLD KRYITPKDIVEGSPNLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

A0A5D3CJI9 Fimbrin-56.44e-2782.54Show/hide
Query:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A EFSGPGTLNVKDPSE+AN +VLEL EKLDYKRY +PKDIVEG+ NLN AFVVQIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERAN-MVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

SwissProt top hitse value%identityAlignment
O50064 Fimbrin-28.1e-1358.06Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P  L VK   ERA +VLE  +K+  +RY+T KDIVEGSPNLN AFV  IFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

Q7G188 Fimbrin-12.0e-1153.23Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P TL+ KDP ERA +VL   E+++ KRY+T ++IVEGS  LN AFV QIF  R
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

Q9FJ70 Fimbrin-35.2e-1256.45Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P TLN +D  ERANMVLE  E+++ KRY+T ++IVEGS  LN AFV QIF  R
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

Q9FKI0 Fimbrin-52.3e-1566.13Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A E S    L  KDP+ERA  VLE  EKLD KRY++PKDIV+GS NLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

Q9SJ84 Fimbrin-41.0e-1566.13Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A E S   TL +KDPSERA  VLE  EKLD KR+++PKDIVEGS NLN AFV Q+F HR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

Arabidopsis top hitse value%identityAlignment
AT2G04750.1 Actin binding Calponin homology (CH) domain-containing protein7.2e-1766.13Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A E S   TL +KDPSERA  VLE  EKLD KR+++PKDIVEGS NLN AFV Q+F HR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

AT4G26700.1 fimbrin 11.4e-1253.23Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P TL+ KDP ERA +VL   E+++ KRY+T ++IVEGS  LN AFV QIF  R
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

AT5G35700.1 fimbrin-like protein 21.6e-1666.13Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        NA A E S    L  KDP+ERA  VLE  EKLD KRY++PKDIV+GS NLN AFV QIFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

AT5G48460.1 Actin binding Calponin homology (CH) domain-containing protein5.7e-1458.06Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P  L VK   ERA +VLE  +K+  +RY+T KDIVEGSPNLN AFV  IFQHR
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR

AT5G55400.1 Actin binding Calponin homology (CH) domain-containing protein3.7e-1356.45Show/hide
Query:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR
        N  A E   P TLN +D  ERANMVLE  E+++ KRY+T ++IVEGS  LN AFV QIF  R
Subjt:  NAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTATGGAGAACTTTTTTAAAGAATTTGCAAATGGGACCATTTTACAGAAGATGAGGATGGAGAGGCATATGCTTATCTACTCAAATGCTCCTGCATCAGAGTT
CTCTGGTCCAGGGACTTTGAATGTTAAAGATCCTTCTGAAAGAGCTAATATGGTTCTGGAGCTTGTAGAAAAACTGGATTACAAAAGATATATTACTCCCAAGGACATTG
TTGAGGGTTCACCAAATCTTAATTTTGCATTTGTTGTCCAAATTTTTCAACACAGAAGATAA
mRNA sequenceShow/hide mRNA sequence
AAATTAAAGATGGATTTTGTTGTTTTAAACATTTGGTGGTGATGGAATATGCTTCTTATGGAGAACTTTTTTAAAGAATTTGCAAATGGGACCATTTTACAGAAGATGAG
GATGGAGAGGCATATGCTTATCTACTCAAATGCTCCTGCATCAGAGTTCTCTGGTCCAGGGACTTTGAATGTTAAAGATCCTTCTGAAAGAGCTAATATGGTTCTGGAGC
TTGTAGAAAAACTGGATTACAAAAGATATATTACTCCCAAGGACATTGTTGAGGGTTCACCAAATCTTAATTTTGCATTTGTTGTCCAAATTTTTCAACACAGAAGATAA
GGCTGCATGTTGGAGCAATTGTTATTACATGTGGAGTTTTGGTCGATATTGCAGTCTTACTTTCATGCTCTAAACCATGGTGCAATTGCTACGATAACCTCTTCTTGGCA
GGGCATGATGGTGAACATTCATAAAATCCTTAAGTCGTGGATGTAGTTGAAATCTCTCCAAAGAAAAATTCAAAGCAAGAGAATGTAGCTTCGACTTGAATCCATGATGA
AGGAAAAGAATTGTACGAAAGTATCGTTGGAACATACTTTTGATGATTATATCAAACATTTTCAATGAATATA
Protein sequenceShow/hide protein sequence
MLLMENFFKEFANGTILQKMRMERHMLIYSNAPASEFSGPGTLNVKDPSERANMVLELVEKLDYKRYITPKDIVEGSPNLNFAFVVQIFQHRR