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CsGy5G012795 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G012795
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA topoisomerase 2-binding protein 1
Genome locationGy14Chr5:15051834..15052121
RNA-Seq ExpressionCsGy5G012795
SyntenyCsGy5G012795
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0007095 - mitotic G2 DNA damage checkpoint (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR001357 - BRCT domain
IPR036420 - BRCT domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8637332.1 hypothetical protein CSA_000003 [Cucumis sativus]8.72e-2396.15Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEKVEIGKLVSAMG VLHTKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
KAE8637425.1 hypothetical protein CSA_021611 [Cucumis sativus]1.78e-2294.23Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEKVEIGKLVSAMG VLHTKA LDVSFVI KNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
KAE8648321.1 hypothetical protein Csa_004667 [Cucumis sativus]4.04e-32100Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYKVMLLELSIFLT
        MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYKVMLLELSIFLT
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYKVMLLELSIFLT
KAE8649617.1 hypothetical protein Csa_011937 [Cucumis sativus]4.02e-2296.15Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEKVEIGKLVSAMG VLHTKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
XP_031741714.1 uncharacterized protein LOC116403909 [Cucumis sativus]3.21e-22100Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
TrEMBL top hitse value%identityAlignment
A0A0A0KY49 BRCT domain-containing protein9.32e-2396.15Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEKVEIGKLVSAMG VLHTKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
A0A1S3BAL1 DNA topoisomerase 2-binding protein 1 isoform X32.16e-1992.31Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEK EIGKLVSAMG VL+TKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
A0A1S4DV57 DNA topoisomerase 2-binding protein 1 isoform X12.16e-1992.31Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEK EIGKLVSAMG VL+TKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
A0A1S4DV59 DNA topoisomerase 2-binding protein 1 isoform X22.16e-1992.31Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEK EIGKLVSAMG VL+TKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
A0A5A7U8G5 DNA topoisomerase 2-binding protein 1 isoform X22.16e-1992.31Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDGVKILASGFQEDEK EIGKLVSAMG VL+TKA LDVSFVIAKNALAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77320.1 transcription coactivators1.4e-1165.38Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDG+K+LASGF  DEKV+I +LV++MG VL ++A  DV+FVI KN LAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
AT1G77320.2 transcription coactivators1.4e-1165.38Show/hide
Query:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK
        MDG+K+LASGF  DEKV+I +LV++MG VL ++A  DV+FVI KN LAAKYK
Subjt:  MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTGTGAAAATCTTGGCATCCGGTTTTCAAGAAGATGAAAAGGTTGAGATAGGGAAGTTAGTTAGTGCAATGGGGGAAGTATTGCATACGAAAGCATTACTAGA
TGTCAGTTTTGTTATCGCGAAGAATGCTTTGGCTGCGAAATACAAGGTCATGTTGCTTGAACTTTCGATTTTCTTGACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTGTGAAAATCTTGGCATCCGGTTTTCAAGAAGATGAAAAGGTTGAGATAGGGAAGTTAGTTAGTGCAATGGGGGAAGTATTGCATACGAAAGCATTACTAGA
TGTCAGTTTTGTTATCGCGAAGAATGCTTTGGCTGCGAAATACAAGGTCATGTTGCTTGAACTTTCGATTTTCTTGACGTGA
Protein sequenceShow/hide protein sequence
MDGVKILASGFQEDEKVEIGKLVSAMGEVLHTKALLDVSFVIAKNALAAKYKVMLLELSIFLT