; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy5G012847 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy5G012847
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationGy14Chr5:15289185..15291488
RNA-Seq ExpressionCsGy5G012847
SyntenyCsGy5G012847
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025369.1 uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa]4.32e-11244.81Show/hide
Query:  MTRLSNASRLEFEEDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHL
        MTR SN  +  + ED+     R+R+E+++   + N S +  +   E SL+ PL+P    NL      E  EKTLREL EPD  QRP+  VIP TT  F L
Subjt:  MTRLSNASRLEFEEDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHL

Query:  RSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQ
        +S LI  L I +GS GED HKHL+DF   C  +RPH ++EEQLNLRAFPF L D AKRWL  LEP   TTW  LKK+FLEKFFP +RA  + KEIYG RQ
Subjt:  RSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQ

Query:  SNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKT-----------------------------------PFKGVVS
        +  E+L EYWER  EL A FP++ +S+  ++QYFY+GLL S R+++D A+GGAL DKT                                   P K V  
Subjt:  SNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKT-----------------------------------PFKGVVS

Query:  CGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLN
        CGVCGL+GH ND+CPE+ E  +   R+                  +  ++ QL     KMEGKGKL AQ +HANVSAI+LRSGK+LN             
Subjt:  CGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLN

Query:  LKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
        L  +  N  KE+KV TNP  SN+ +     ND   +I  P PPFPSRL+  +K+   +EELLE+ +KV++NLPLL A++ +P
Subjt:  LKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.02e-11741.4Show/hide
Query:  MTRLSNASRLEFE--EDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNF
        MTR SN   LEF   ED+     R+R+E+++   + N S +  +   E SL+ PL+P    NL      E  EKT+R+L E D  QRP+  VI  TT  F
Subjt:  MTRLSNASRLEFE--EDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNF

Query:  HLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGA
         L+  LI  LPI +G++GEDPHKHL+DF   CD +RPHG++EEQLNLRAFPFSL D AKRWL  LEP + TTW  LKK+FLEKFFP +R   + KEIYG 
Subjt:  HLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGA

Query:  RQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG------------------------------------
        RQ+  E+L +YWE++ ELCA FP++ +    ++QYFY GLL S R+++DAA+GGAL +K P +                                     
Subjt:  RQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG------------------------------------

Query:  -----------------VVSCGVCGLLGHHNDQCPEIKE-------------------RDDSSLRWGLQEPKHNNTPSSSSSK-----------------
                         V  C VCGL+GH ND+CPE+ E                   RD+  LRWG    KH   P++SS++                 
Subjt:  -----------------VVSCGVCGLLGHHNDQCPEIKE-------------------RDDSSLRWGLQEPKHNNTPSSSSSK-----------------

Query:  ---ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPP
           E+  ++ QL     KM+GKGKLPAQPNHANVS I+LRSGK+L+  +        + L  +  N  KE+KV TNP LSN  +     ND   +I  P 
Subjt:  ---ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPP

Query:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
        P FPSRL+  +K+   +EELLE+F+KV++NLPLL A++ +P
Subjt:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

KAA0046065.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.68e-9646.8Show/hide
Query:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE
        MGE   EKTLREL +PD  QRP+  V+PPT   F L+  LI  LPI +GS+GED HKHL+ F   CD +RPHG++EEQLNLRAFPFSL D A  WL  LE
Subjt:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE

Query:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARF-----PYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP
        P + TTW  LKK+FLEKFFP +RA  + KEIYG RQ    +L EYWER+ EL A           +  R+++             + +  +       TP
Subjt:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARF-----PYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP

Query:  FKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEP---KHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENND
         K V  CGVC L+GH ND+CPE  +   +S   G       K   T + S  +E+  ++ QL     KM+GKGKLPAQPNHANVSAI+LRSGK+L+    
Subjt:  FKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEP---KHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENND

Query:  VPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
                 L  +  N  KE+KV TNP  SN+ +     ND   +I  P PPFPSRL+  +K+   +EELLE+FKKV++NLPLL A++ IP
Subjt:  VPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]2.07e-18147.44Show/hide
Query:  MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSN
        MTRL NASRLEFEEDITL+E RLRKEKKKL +SSLEP+IFTFE SLEEPLEPS ENNLN+LMGEEAPEKTLR+LYEPD+HQRPIG VIPPTTTNFHLR  
Subjt:  MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSN

Query:  LILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNN
                                                                                                            
Subjt:  LILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNN

Query:  ETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP--------------------------------------------
                         PYNQLSERDIVQYFY GLL SVRD IDAASGGALIDKTP                                            
Subjt:  ETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP--------------------------------------------

Query:  -----FKG----VVSCGVCGLLGHHNDQCPEIKE---------------------RDDSSLRWGLQEPKHNNTPSSSSSK--------------------
              KG    VVSCGVCGLLGHHNDQCPEIKE                     RDD SLRWG QEPKHNNTPS+SSSK                    
Subjt:  -----FKG----VVSCGVCGLLGHHNDQCPEIKE---------------------RDDSSLRWGLQEPKHNNTPSSSSSK--------------------

Query:  --------------------------------ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKED
                                        ELGNKLDQLAIQFLK EGKGKLPAQPNHANVSAITLRSGKVLNEN+DVPLPHFD NLKRSDSNIKKED
Subjt:  --------------------------------ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKED

Query:  KVHTNPFLSNASSSNNDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVK-----------------SIP----------------
        K+HTNP LSNASSSNNDSNNHIDNPPPPFPSRLSQPRK+LKNDEELLEVFKKVEVNLPLLT +K                 S+P                
Subjt:  KVHTNPFLSNASSSNNDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVK-----------------SIP----------------

Query:  ---------------------------------------------------------------------------------------------SVEFDGD
                                                                                                     SVEFDGD
Subjt:  ---------------------------------------------------------------------------------------------SVEFDGD

Query:  VVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNEFSKEKPSDDDL
        VVSFNIFDDIKSSNDH SLCALDTLESLETLEEQDKLNELIDQ TLEYVDNEFSKEKPSDDDL
Subjt:  VVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNEFSKEKPSDDDL

KAE8652898.1 hypothetical protein Csa_022680 [Cucumis sativus]0.0100Show/hide
Query:  MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSN
        MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSN
Subjt:  MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSN

Query:  LILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNN
        LILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNN
Subjt:  LILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNN

Query:  ETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTP
        ETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTP
Subjt:  ETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTP

Query:  SSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNPP
        SSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNPP
Subjt:  SSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNPP

Query:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIPSVEFDGDVVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNE
        PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIPSVEFDGDVVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNE
Subjt:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIPSVEFDGDVVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNE

Query:  FSKEKPSDDDL
        FSKEKPSDDDL
Subjt:  FSKEKPSDDDL

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein1.95e-11741.4Show/hide
Query:  MTRLSNASRLEFE--EDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNF
        MTR SN   LEF   ED+     R+R+E+++   + N S +  +   E SL+ PL+P    NL      E  EKT+R+L E D  QRP+  VI  TT  F
Subjt:  MTRLSNASRLEFE--EDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNF

Query:  HLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGA
         L+  LI  LPI +G++GEDPHKHL+DF   CD +RPHG++EEQLNLRAFPFSL D AKRWL  LEP + TTW  LKK+FLEKFFP +R   + KEIYG 
Subjt:  HLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGA

Query:  RQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG------------------------------------
        RQ+  E+L +YWE++ ELCA FP++ +    ++QYFY GLL S R+++DAA+GGAL +K P +                                     
Subjt:  RQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG------------------------------------

Query:  -----------------VVSCGVCGLLGHHNDQCPEIKE-------------------RDDSSLRWGLQEPKHNNTPSSSSSK-----------------
                         V  C VCGL+GH ND+CPE+ E                   RD+  LRWG    KH   P++SS++                 
Subjt:  -----------------VVSCGVCGLLGHHNDQCPEIKE-------------------RDDSSLRWGLQEPKHNNTPSSSSSK-----------------

Query:  ---ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPP
           E+  ++ QL     KM+GKGKLPAQPNHANVS I+LRSGK+L+  +        + L  +  N  KE+KV TNP LSN  +     ND   +I  P 
Subjt:  ---ELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPP

Query:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
        P FPSRL+  +K+   +EELLE+F+KV++NLPLL A++ +P
Subjt:  PPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

A0A5A7TXC8 Retrotransposon gag protein2.75e-9646.8Show/hide
Query:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE
        MGE   EKTLREL +PD  QRP+  V+PPT   F L+  LI  LPI +GS+GED HKHL+ F   CD +RPHG++EEQLNLRAFPFSL D A  WL  LE
Subjt:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE

Query:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARF-----PYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP
        P + TTW  LKK+FLEKFFP +RA  + KEIYG RQ    +L EYWER+ EL A           +  R+++             + +  +       TP
Subjt:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARF-----PYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTP

Query:  FKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEP---KHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENND
         K V  CGVC L+GH ND+CPE  +   +S   G       K   T + S  +E+  ++ QL     KM+GKGKLPAQPNHANVSAI+LRSGK+L+    
Subjt:  FKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEP---KHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENND

Query:  VPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
                 L  +  N  KE+KV TNP  SN+ +     ND   +I  P PPFPSRL+  +K+   +EELLE+FKKV++NLPLL A++ IP
Subjt:  VPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

A0A5A7USL5 Retrotrans_gag domain-containing protein3.62e-9441.72Show/hide
Query:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE
        MGE   EK LREL EP+   RP+  VIPPTT  F L+  LI  LPI +GS+GEDPHKHL+DF   CD +RP+ ++EEQLNLRAFPF L D AK WL  LE
Subjt:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLE

Query:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG--
        P + TTW  LKK+FLEKFFP +RA  + KEIYG RQ+  E+L +YWER+ ELCA  P+  + +  ++QYFY+GLL   R+++DAA+GGAL DKTP +   
Subjt:  PQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG--

Query:  ---------------------------------------------------VVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNN---------T
                                                           V  CGVCGL+GH ND+CPE+ E  +   R+   +P   N         T
Subjt:  ---------------------------------------------------VVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNN---------T

Query:  PSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNP
         + S  +E+  ++ QL     KM+GKGKLPAQP+HAN         K L +      PH           I K DK   N F                 P
Subjt:  PSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNP

Query:  PPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSI
         PPFPSRL+Q +K+   +EELLE+F+KV++N PLL A++ +
Subjt:  PPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSI

A0A5D3CZ23 Retrotrans_gag domain-containing protein4.65e-9049.38Show/hide
Query:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPI-IRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINL
        MGE   EKTLREL EPD  QRP+  V+PPTT  F L+  LI  L I I+GS GEDPHKHL+DF   CD +RPHG+ EEQLNLRAFPFSL+D AKRWL  L
Subjt:  MGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPI-IRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINL

Query:  EPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG-
        E  + TTW   KK+FLEKFFP +RA  +       RQ+  E+L EYWER+ ELCA FP++ + +  ++QYFY+GLL   R ++DAA+GGAL++KTP +  
Subjt:  EPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKG-

Query:  ------------------------VVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNN---------TPSSSSSKELGNKLDQLAIQFLKMEGKG
                                   CGVCGL+GH ND+CPE+ E  +   R+   +P   N         T + S  +E+  ++ QL     KM+GKG
Subjt:  ------------------------VVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNN---------TPSSSSSKELGNKLDQLAIQFLKMEGKG

Query:  KLPAQPNHANVSAITLRSGKVL
        KL AQP+HANVSAI+LRSGK+L
Subjt:  KLPAQPNHANVSAITLRSGKVL

A0A5D3DIP6 Retrotrans_gag domain-containing protein2.09e-11244.81Show/hide
Query:  MTRLSNASRLEFEEDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHL
        MTR SN  +  + ED+     R+R+E+++   + N S +  +   E SL+ PL+P    NL      E  EKTLREL EPD  QRP+  VIP TT  F L
Subjt:  MTRLSNASRLEFEEDITLNEIRLRKEKKK---LANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHL

Query:  RSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQ
        +S LI  L I +GS GED HKHL+DF   C  +RPH ++EEQLNLRAFPF L D AKRWL  LEP   TTW  LKK+FLEKFFP +RA  + KEIYG RQ
Subjt:  RSNLILNLPIIRGSNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQ

Query:  SNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKT-----------------------------------PFKGVVS
        +  E+L EYWER  EL A FP++ +S+  ++QYFY+GLL S R+++D A+GGAL DKT                                   P K V  
Subjt:  SNNETLFEYWERYNELCARFPYNQLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKT-----------------------------------PFKGVVS

Query:  CGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLN
        CGVCGL+GH ND+CPE+ E  +   R+                  +  ++ QL     KMEGKGKL AQ +HANVSAI+LRSGK+LN             
Subjt:  CGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPAQPNHANVSAITLRSGKVLNENNDVPLPHFDLN

Query:  LKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP
        L  +  N  KE+KV TNP  SN+ +     ND   +I  P PPFPSRL+  +K+   +EELLE+ +KV++NLPLL A++ +P
Subjt:  LKRSDSNIKKEDKVHTNPFLSNASSSN---NDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGGTTGTCCAATGCATCTAGATTAGAATTTGAAGAAGACATAACCTTGAATGAAATAAGACTAAGGAAAGAAAAGAAAAAGTTAGCAAATTCATCCTTAGAGCC
TTACATTTTCACATTTGAACGATCCCTTGAAGAACCCTTAGAGCCTTCCTTCGAGAACAATTTAAATAATCTAATGGGAGAAGAGGCACCCGAAAAAACACTTAGGGAAT
TATATGAGCCCGATGTCCACCAAAGGCCAATAGGGAAAGTAATTCCACCTACCACAACCAATTTTCACCTTAGGTCGAATTTAATCTTAAACTTACCTATCATTAGAGGA
TCCAATGGAGAAGACCCACATAAACATCTTAGGGATTTTTCTTGGGCATGTGACCTCCTTAGACCTCATGGGGTAACCGAGGAACAGTTGAACCTTAGGGCATTTCCTTT
TTCCCTTGTCGATAGTGCCAAAAGATGGCTTATAAACTTAGAGCCTCAAACTTTCACCACTTGGGAACAACTTAAGAAAAGGTTCTTAGAAAAATTCTTCCCAATAACTA
GAGCCCAAACGGTCTTAAAAGAAATCTATGGTGCTAGGCAATCTAATAATGAAACTTTATTTGAATATTGGGAGAGGTATAATGAACTTTGTGCTAGGTTTCCTTACAAC
CAATTAAGTGAGAGAGACATTGTGCAATATTTCTATACGGGGTTGTTGCCATCCGTTAGGGACTCCATAGATGCCGCTTCGGGAGGAGCCTTGATTGATAAAACTCCCTT
CAAAGGAGTAGTTTCATGTGGAGTATGTGGCTTGCTTGGCCACCATAATGACCAATGTCCTGAGATAAAAGAGAGGGACGATTCAAGTCTTAGATGGGGTCTACAAGAAC
CCAAACATAACAACACTCCTTCATCATCATCATCAAAAGAGTTAGGAAACAAGTTAGACCAATTGGCAATCCAATTTCTTAAAATGGAAGGGAAAGGCAAACTTCCCGCC
CAACCAAACCATGCTAATGTAAGTGCCATCACTTTAAGAAGTGGTAAGGTTTTAAATGAAAATAATGATGTTCCTTTACCTCATTTTGATCTTAACTTGAAAAGAAGTGA
TTCAAATATCAAAAAGGAAGACAAGGTACATACTAACCCTTTTCTTTCTAATGCTTCTTCTTCTAACAATGATTCAAATAACCATATTGATAATCCTCCACCTCCTTTTC
CTTCTAGGTTATCTCAACCAAGGAAAAAACTCAAGAATGATGAAGAACTCCTTGAAGTTTTCAAGAAGGTAGAAGTGAATCTACCCCTCTTGACGGCAGTCAAAAGCATA
CCAAGTGTTGAGTTTGATGGTGATGTTGTGTCTTTCAATATTTTTGATGATATAAAGTCCTCTAATGATCATGCTTCATTGTGTGCACTCGATACTTTAGAATCATTAGA
AACATTAGAAGAGCAAGATAAACTCAATGAACTTATAGACCAAGTAACTTTAGAATATGTTGATAATGAATTTTCTAAAGAGAAACCTAGTGATGATGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTAGGTTGTCCAATGCATCTAGATTAGAATTTGAAGAAGACATAACCTTGAATGAAATAAGACTAAGGAAAGAAAAGAAAAAGTTAGCAAATTCATCCTTAGAGCC
TTACATTTTCACATTTGAACGATCCCTTGAAGAACCCTTAGAGCCTTCCTTCGAGAACAATTTAAATAATCTAATGGGAGAAGAGGCACCCGAAAAAACACTTAGGGAAT
TATATGAGCCCGATGTCCACCAAAGGCCAATAGGGAAAGTAATTCCACCTACCACAACCAATTTTCACCTTAGGTCGAATTTAATCTTAAACTTACCTATCATTAGAGGA
TCCAATGGAGAAGACCCACATAAACATCTTAGGGATTTTTCTTGGGCATGTGACCTCCTTAGACCTCATGGGGTAACCGAGGAACAGTTGAACCTTAGGGCATTTCCTTT
TTCCCTTGTCGATAGTGCCAAAAGATGGCTTATAAACTTAGAGCCTCAAACTTTCACCACTTGGGAACAACTTAAGAAAAGGTTCTTAGAAAAATTCTTCCCAATAACTA
GAGCCCAAACGGTCTTAAAAGAAATCTATGGTGCTAGGCAATCTAATAATGAAACTTTATTTGAATATTGGGAGAGGTATAATGAACTTTGTGCTAGGTTTCCTTACAAC
CAATTAAGTGAGAGAGACATTGTGCAATATTTCTATACGGGGTTGTTGCCATCCGTTAGGGACTCCATAGATGCCGCTTCGGGAGGAGCCTTGATTGATAAAACTCCCTT
CAAAGGAGTAGTTTCATGTGGAGTATGTGGCTTGCTTGGCCACCATAATGACCAATGTCCTGAGATAAAAGAGAGGGACGATTCAAGTCTTAGATGGGGTCTACAAGAAC
CCAAACATAACAACACTCCTTCATCATCATCATCAAAAGAGTTAGGAAACAAGTTAGACCAATTGGCAATCCAATTTCTTAAAATGGAAGGGAAAGGCAAACTTCCCGCC
CAACCAAACCATGCTAATGTAAGTGCCATCACTTTAAGAAGTGGTAAGGTTTTAAATGAAAATAATGATGTTCCTTTACCTCATTTTGATCTTAACTTGAAAAGAAGTGA
TTCAAATATCAAAAAGGAAGACAAGGTACATACTAACCCTTTTCTTTCTAATGCTTCTTCTTCTAACAATGATTCAAATAACCATATTGATAATCCTCCACCTCCTTTTC
CTTCTAGGTTATCTCAACCAAGGAAAAAACTCAAGAATGATGAAGAACTCCTTGAAGTTTTCAAGAAGGTAGAAGTGAATCTACCCCTCTTGACGGCAGTCAAAAGCATA
CCAAGTGTTGAGTTTGATGGTGATGTTGTGTCTTTCAATATTTTTGATGATATAAAGTCCTCTAATGATCATGCTTCATTGTGTGCACTCGATACTTTAGAATCATTAGA
AACATTAGAAGAGCAAGATAAACTCAATGAACTTATAGACCAAGTAACTTTAGAATATGTTGATAATGAATTTTCTAAAGAGAAACCTAGTGATGATGATCTTTGA
Protein sequenceShow/hide protein sequence
MTRLSNASRLEFEEDITLNEIRLRKEKKKLANSSLEPYIFTFERSLEEPLEPSFENNLNNLMGEEAPEKTLRELYEPDVHQRPIGKVIPPTTTNFHLRSNLILNLPIIRG
SNGEDPHKHLRDFSWACDLLRPHGVTEEQLNLRAFPFSLVDSAKRWLINLEPQTFTTWEQLKKRFLEKFFPITRAQTVLKEIYGARQSNNETLFEYWERYNELCARFPYN
QLSERDIVQYFYTGLLPSVRDSIDAASGGALIDKTPFKGVVSCGVCGLLGHHNDQCPEIKERDDSSLRWGLQEPKHNNTPSSSSSKELGNKLDQLAIQFLKMEGKGKLPA
QPNHANVSAITLRSGKVLNENNDVPLPHFDLNLKRSDSNIKKEDKVHTNPFLSNASSSNNDSNNHIDNPPPPFPSRLSQPRKKLKNDEELLEVFKKVEVNLPLLTAVKSI
PSVEFDGDVVSFNIFDDIKSSNDHASLCALDTLESLETLEEQDKLNELIDQVTLEYVDNEFSKEKPSDDDL